RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 M0R2N4 97 aa4.3□□□□□ -1.72
PTCD3-215ENST00000484203 SPINK4O60575 86 aa4.3□□□□□ -1.72
PTCD3-215ENST00000484203 PRM2P04554 102 aa4.3□□□□□ -1.72
PTCD3-215ENST00000484203 ZNF415Q09FC8 603 aa4.3□□□□□ -1.72
PTCD3-215ENST00000484203 ERCC8Q13216 396 aa4.3□□□□□ -1.72
PTCD3-215ENST00000484203 FCN2Q15485 313 aa4.3□□□□□ -1.72
PTCD3-215ENST00000484203 FAM159AQ6UWV7 190 aa4.3□□□□□ -1.72
PTCD3-215ENST00000484203 SH2D6Q7Z4S9 175 aa4.3□□□□□ -1.72
PTCD3-215ENST00000484203 ZFAND2AQ8N6M9 145 aa4.3□□□□□ -1.72
PTCD3-215ENST00000484203 OR10G4Q8NGN3 311 aa4.3□□□□□ -1.72
PTCD3-215ENST00000484203 OR10G9Q8NGN4 311 aa4.3□□□□□ -1.72
PTCD3-215ENST00000484203 OR10G7Q8NGN6 311 aa4.3□□□□□ -1.72
PTCD3-215ENST00000484203 OR2G3Q8NGZ4 309 aa4.3□□□□□ -1.72
PTCD3-215ENST00000484203 SVIPQ8NHG7 77 aa4.3□□□□□ -1.72
PTCD3-215ENST00000484203 ZNRF2Q8NHG8 242 aa4.3□□□□□ -1.72
PTCD3-215ENST00000484203 ST6GAL2Q96JF0 529 aa4.3□□□□□ -1.72
PTCD3-215ENST00000484203 AQP10Q96PS8 301 aa4.3□□□□□ -1.72
PTCD3-215ENST00000484203 NDFIP1Q9BT67 221 aa4.3□□□□□ -1.72
PTCD3-215ENST00000484203 PSMG3Q9BT73 122 aaPredicted RBP4.3□□□□□ -1.72
PTCD3-215ENST00000484203 UPK3BQ9BT76 320 aa4.3□□□□□ -1.72
PTCD3-215ENST00000484203 GSN-AS1Q9NRJ2 163 aa4.3□□□□□ -1.72
PTCD3-215ENST00000484203 TP53TG3Q9ULZ0 132 aa4.3□□□□□ -1.72
PTCD3-215ENST00000484203 FRAS1Q86XX4 4008 aa4.3□□□□□ -1.72
PTCD3-215ENST00000484203 IGLV2-18A0A075B6J9 118 aa4.29□□□□□ -1.72
PTCD3-215ENST00000484203 IGKV2-40A0A087WW87 121 aaPredicted RBP4.29□□□□□ -1.72
PTCD3-215ENST00000484203 BORCS7-ASMTA0A0B4J1R7 106 aa4.29□□□□□ -1.72
PTCD3-215ENST00000484203 TRAV21A0A0B4J279 112 aa4.29□□□□□ -1.72
PTCD3-215ENST00000484203 PGPA6NDG6 321 aa4.29□□□□□ -1.72
PTCD3-215ENST00000484203 RTL8CO15255 209 aa4.29□□□□□ -1.72
PTCD3-215ENST00000484203 CIDEAO60543 219 aa4.29□□□□□ -1.72
PTCD3-215ENST00000484203 IGKV2D-40P01614 121 aaPredicted RBP4.29□□□□□ -1.72
PTCD3-215ENST00000484203 GIPP09681 153 aaPredicted RBP4.29□□□□□ -1.72
PTCD3-215ENST00000484203 CD300CQ08708 224 aa4.29□□□□□ -1.72
PTCD3-215ENST00000484203 BTN1A1Q13410 526 aa4.29□□□□□ -1.72
PTCD3-215ENST00000484203 TDRG1Q3Y452 100 aa4.29□□□□□ -1.72
PTCD3-215ENST00000484203 Q6AWC8 147 aa4.29□□□□□ -1.72
PTCD3-215ENST00000484203 Q6ZTI0 123 aa4.29□□□□□ -1.72
PTCD3-215ENST00000484203 SSX7Q7RTT5 188 aa4.29□□□□□ -1.72
PTCD3-215ENST00000484203 C6orf223Q8N319 242 aa4.29□□□□□ -1.72
PTCD3-215ENST00000484203 C11orf72Q8NBR9 251 aa4.29□□□□□ -1.72
PTCD3-215ENST00000484203 PHYHIPLQ96FC7 376 aa4.29□□□□□ -1.72
PTCD3-215ENST00000484203 KCNS1Q96KK3 526 aa4.29□□□□□ -1.72
PTCD3-215ENST00000484203 VGLL1Q99990 258 aa4.29□□□□□ -1.72
PTCD3-215ENST00000484203 SMIM3Q9BZL3 60 aa4.29□□□□□ -1.72
PTCD3-215ENST00000484203 NKX6-2Q9C056 277 aaPredicted RBP4.29□□□□□ -1.72
PTCD3-215ENST00000484203 Q9H8V8 135 aa4.29□□□□□ -1.72
PTCD3-215ENST00000484203 TMEM167BQ9NRX6 74 aa4.29□□□□□ -1.72
PTCD3-215ENST00000484203 PRO0255Q9UI72 69 aa4.29□□□□□ -1.72
PTCD3-215ENST00000484203 MRPS16Q9Y3D3 137 aaKnown RBP4.29□□□□□ -1.72
PTCD3-215ENST00000484203 LINC00588Q9Y4M8 146 aa4.29□□□□□ -1.72
PTCD3-215ENST00000484203 KLF12Q9Y4X4 402 aa4.29□□□□□ -1.72
PTCD3-215ENST00000484203 ICOSQ9Y6W8 199 aa4.29□□□□□ -1.72
PTCD3-215ENST00000484203 TRAV9-2A0A087WT02 112 aa4.28□□□□□ -1.72
PTCD3-215ENST00000484203 TAAR5O14804 337 aa4.28□□□□□ -1.72
PTCD3-215ENST00000484203 CXorf1O96002 111 aa4.28□□□□□ -1.72
PTCD3-215ENST00000484203 ORM1P02763 201 aa4.28□□□□□ -1.72
PTCD3-215ENST00000484203 CDC34P49427 236 aaPredicted RBP4.28□□□□□ -1.72
PTCD3-215ENST00000484203 MRPL23Q16540 153 aaKnown RBP4.28□□□□□ -1.72
PTCD3-215ENST00000484203 ZFP69Q49AA0 526 aa4.28□□□□□ -1.72
PTCD3-215ENST00000484203 SAPCD1Q5SSQ6 148 aa4.28□□□□□ -1.72
PTCD3-215ENST00000484203 IQCF2Q8IXL9 164 aa4.28□□□□□ -1.72
PTCD3-215ENST00000484203 C5orf17Q8NAS9 161 aa4.28□□□□□ -1.72
PTCD3-215ENST00000484203 PCNPQ8WW12 178 aaKnown RBP4.28□□□□□ -1.72
PTCD3-215ENST00000484203 RASL10AQ92737 203 aa4.28□□□□□ -1.72
PTCD3-215ENST00000484203 HYLS1Q96M11 299 aa4.28□□□□□ -1.72
PTCD3-215ENST00000484203 ACTR3CQ9C0K3 210 aaPredicted RBP4.28□□□□□ -1.72
PTCD3-215ENST00000484203 SH3BGRL3Q9H299 93 aa4.28□□□□□ -1.72
PTCD3-215ENST00000484203 TNFSF18Q9UNG2 199 aa4.28□□□□□ -1.72
PTCD3-215ENST00000484203 HHLA3Q9XRX5 114 aa4.28□□□□□ -1.72
PTCD3-215ENST00000484203 ALG5Q9Y673 324 aa4.28□□□□□ -1.72
PTCD3-215ENST00000484203 TRGV4A0A0C4DH28 118 aa4.27□□□□□ -1.73
PTCD3-215ENST00000484203 A0A0J9YY99 117 aa4.27□□□□□ -1.73
PTCD3-215ENST00000484203 A0A1B0GVY2 172 aa4.27□□□□□ -1.73
PTCD3-215ENST00000484203 C9JCJ5 164 aa4.27□□□□□ -1.73
PTCD3-215ENST00000484203 M0R2P5 195 aa4.27□□□□□ -1.73
PTCD3-215ENST00000484203 STAG3L2P0CL84 134 aa4.27□□□□□ -1.73
PTCD3-215ENST00000484203 STAG3L3P0CL85 134 aa4.27□□□□□ -1.73
PTCD3-215ENST00000484203 PPT1P50897 306 aa4.27□□□□□ -1.73
PTCD3-215ENST00000484203 RGS21Q2M5E4 152 aa4.27□□□□□ -1.73
PTCD3-215ENST00000484203 GOLT1AQ6ZVE7 132 aa4.27□□□□□ -1.73
PTCD3-215ENST00000484203 NEGR1Q7Z3B1 354 aa4.27□□□□□ -1.73
PTCD3-215ENST00000484203 NFE4Q86UQ8 179 aa4.27□□□□□ -1.73
PTCD3-215ENST00000484203 HSD17B11Q8NBQ5 300 aa4.27□□□□□ -1.73
PTCD3-215ENST00000484203 SUN5Q8TC36 379 aa4.27□□□□□ -1.73
PTCD3-215ENST00000484203 TXNDC17Q9BRA2 123 aa4.27□□□□□ -1.73
PTCD3-215ENST00000484203 TCEAL7Q9BRU2 100 aa4.27□□□□□ -1.73
PTCD3-215ENST00000484203 SDF2L1Q9HCN8 221 aa4.27□□□□□ -1.73
PTCD3-215ENST00000484203 TREM1Q9NP99 234 aa4.27□□□□□ -1.73
PTCD3-215ENST00000484203 A0A1W2PRE2 83 aa4.26□□□□□ -1.73
PTCD3-215ENST00000484203 F6UZH7 168 aa4.26□□□□□ -1.73
PTCD3-215ENST00000484203 ARL14EPLP0DKL9 152 aa4.26□□□□□ -1.73
PTCD3-215ENST00000484203 ATP6V0CP27449 155 aa4.26□□□□□ -1.73
PTCD3-215ENST00000484203 GCHFRP30047 84 aa4.26□□□□□ -1.73
PTCD3-215ENST00000484203 SRIP30626 198 aa4.26□□□□□ -1.73
PTCD3-215ENST00000484203 RAB2AP61019 212 aa4.26□□□□□ -1.73
PTCD3-215ENST00000484203 TMEM183BQ1AE95 376 aa4.26□□□□□ -1.73
PTCD3-215ENST00000484203 ESRGQ1W209 222 aa4.26□□□□□ -1.73
PTCD3-215ENST00000484203 TMEM183AQ8IXX5 376 aa4.26□□□□□ -1.73
PTCD3-215ENST00000484203 Q8TAT8 98 aa4.26□□□□□ -1.73
PTCD3-215ENST00000484203 WFDC1Q9HC57 220 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms