RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 TMEM78Q5T7P6 136 aa8.97□□□□□ -0.97
SEC61A1-205ENST00000483956 C17orf77Q96MU5 243 aa8.97□□□□□ -0.97
SEC61A1-205ENST00000483956 ABCA1O95477 2261 aa8.96□□□□□ -0.97
SEC61A1-205ENST00000483956 MALRD1Q5VYJ5 2156 aa8.96□□□□□ -0.97
SEC61A1-205ENST00000483956 LINC01546A6NGU7 62 aa8.96□□□□□ -0.97
SEC61A1-205ENST00000483956 MRPS12O15235 138 aaKnown RBP8.96□□□□□ -0.97
SEC61A1-205ENST00000483956 TNFRSF6BO95407 300 aa8.96□□□□□ -0.97
SEC61A1-205ENST00000483956 PRSS33Q8NF86 280 aa8.96□□□□□ -0.97
SEC61A1-205ENST00000483956 RNF185Q96GF1 192 aa8.96□□□□□ -0.97
SEC61A1-205ENST00000483956 SPANXA1Q9NS26 97 aa8.96□□□□□ -0.97
SEC61A1-205ENST00000483956 C21orf62Q9NYP8 219 aa8.96□□□□□ -0.97
SEC61A1-205ENST00000483956 AKAP13Q12802 2813 aa8.96□□□□□ -0.98
SEC61A1-205ENST00000483956 C9JAW5 83 aa8.96□□□□□ -0.98
SEC61A1-205ENST00000483956 SRSF9Q13242 221 aaKnown RBP eCLIP8.96□□□□□ -0.98
SEC61A1-205ENST00000483956 PLEKHB2Q96CS7 222 aa8.96□□□□□ -0.98
SEC61A1-205ENST00000483956 RNF5Q99942 180 aa8.96□□□□□ -0.98
SEC61A1-205ENST00000483956 CD7P09564 240 aa8.95□□□□□ -0.98
SEC61A1-205ENST00000483956 PDE6HQ13956 83 aa8.95□□□□□ -0.98
SEC61A1-205ENST00000483956 NXT2Q9NPJ8 142 aaKnown RBP8.95□□□□□ -0.98
SEC61A1-205ENST00000483956 BUB1B-PAK6H3BSN5 160 aa8.95□□□□□ -0.98
SEC61A1-205ENST00000483956 K7EIM0 57 aa8.95□□□□□ -0.98
SEC61A1-205ENST00000483956 NDUFA11Q86Y39 141 aa8.95□□□□□ -0.98
SEC61A1-205ENST00000483956 NTN5Q8WTR8 489 aaPredicted RBP8.95□□□□□ -0.98
SEC61A1-205ENST00000483956 ONECUT1Q9UBC0 465 aa8.95□□□□□ -0.98
SEC61A1-205ENST00000483956 SMIM9A6NGZ8 99 aa8.94□□□□□ -0.98
SEC61A1-205ENST00000483956 SH2D1AO60880 128 aa8.94□□□□□ -0.98
SEC61A1-205ENST00000483956 COX8CQ7Z4L0 72 aa8.94□□□□□ -0.98
SEC61A1-205ENST00000483956 Q8N1Y9 231 aa8.94□□□□□ -0.98
SEC61A1-205ENST00000483956 MYOZ3Q8TDC0 251 aa8.94□□□□□ -0.98
SEC61A1-205ENST00000483956 RNASE6Q93091 150 aaKnown RBP8.94□□□□□ -0.98
SEC61A1-205ENST00000483956 DNAJC30Q96LL9 226 aa8.94□□□□□ -0.98
SEC61A1-205ENST00000483956 PLNP26678 52 aa8.94□□□□□ -0.98
SEC61A1-205ENST00000483956 EFNA4P52798 201 aa8.94□□□□□ -0.98
SEC61A1-205ENST00000483956 SCGB1D4Q6XE38 83 aa8.94□□□□□ -0.98
SEC61A1-205ENST00000483956 TRPT1Q86TN4 253 aaKnown RBP8.94□□□□□ -0.98
SEC61A1-205ENST00000483956 ZNF491Q8N8L2 437 aa8.94□□□□□ -0.98
SEC61A1-205ENST00000483956 RNF125Q96EQ8 232 aa8.94□□□□□ -0.98
SEC61A1-205ENST00000483956 SMG1Q96Q15 3661 aaKnown RBP8.94□□□□□ -0.98
SEC61A1-205ENST00000483956 ACACAQ13085 2346 aa8.94□□□□□ -0.98
SEC61A1-205ENST00000483956 M0R3E3 92 aa8.94□□□□□ -0.98
SEC61A1-205ENST00000483956 RPL7P18124 248 aaKnown RBP8.94□□□□□ -0.98
SEC61A1-205ENST00000483956 MRPL23Q16540 153 aaKnown RBP8.94□□□□□ -0.98
SEC61A1-205ENST00000483956 LINC01559Q495D7 138 aa8.94□□□□□ -0.98
SEC61A1-205ENST00000483956 NBASA2RRP1 2371 aa8.93□□□□□ -0.98
SEC61A1-205ENST00000483956 ATMQ13315 3056 aa8.93□□□□□ -0.98
SEC61A1-205ENST00000483956 CHD8Q9HCK8 2581 aa8.93□□□□□ -0.98
SEC61A1-205ENST00000483956 ZNF815PA8K554 130 aa8.93□□□□□ -0.98
SEC61A1-205ENST00000483956 DEFB124Q8NES8 71 aa8.93□□□□□ -0.98
SEC61A1-205ENST00000483956 TRAV8-4A0A0B4J246 113 aa8.92□□□□□ -0.98
SEC61A1-205ENST00000483956 A0A0G2JNJ9 132 aa8.92□□□□□ -0.98
SEC61A1-205ENST00000483956 FOXC1Q12948 553 aa8.92□□□□□ -0.98
SEC61A1-205ENST00000483956 Q9UFV3 132 aa8.92□□□□□ -0.98
SEC61A1-205ENST00000483956 TRAV25A0A0B4J276 109 aa8.92□□□□□ -0.98
SEC61A1-205ENST00000483956 TEX49A0A1B0GTD5 131 aa8.92□□□□□ -0.98
SEC61A1-205ENST00000483956 VKORC1Q9BQB6 163 aa8.92□□□□□ -0.98
SEC61A1-205ENST00000483956 PRADC1Q9BSG0 188 aa8.92□□□□□ -0.98
SEC61A1-205ENST00000483956 IGLV2-18A0A075B6J9 118 aa8.91□□□□□ -0.98
SEC61A1-205ENST00000483956 TRAV2A0A0B4J234 112 aa8.91□□□□□ -0.98
SEC61A1-205ENST00000483956 F8VRH5 84 aa8.91□□□□□ -0.98
SEC61A1-205ENST00000483956 LY6LH3BQJ8 138 aa8.91□□□□□ -0.98
SEC61A1-205ENST00000483956 EGR2P11161 476 aaPredicted RBP8.91□□□□□ -0.98
SEC61A1-205ENST00000483956 PLGLAQ15195 96 aa8.91□□□□□ -0.98
SEC61A1-205ENST00000483956 Q8N8P6 123 aa8.91□□□□□ -0.98
SEC61A1-205ENST00000483956 DYNLRB1Q9NP97 96 aa8.91□□□□□ -0.98
SEC61A1-205ENST00000483956 CFC1BP0CG36 223 aa8.91□□□□□ -0.98
SEC61A1-205ENST00000483956 CFC1P0CG37 223 aa8.91□□□□□ -0.98
SEC61A1-205ENST00000483956 ROS1P08922 2347 aa8.9□□□□□ -0.98
SEC61A1-205ENST00000483956 OOSP1A8MZH6 123 aa8.9□□□□□ -0.98
SEC61A1-205ENST00000483956 B9A039 149 aa8.9□□□□□ -0.98
SEC61A1-205ENST00000483956 H7C1H1 209 aa8.9□□□□□ -0.98
SEC61A1-205ENST00000483956 FAM19A5Q7Z5A7 132 aaPredicted RBP8.9□□□□□ -0.98
SEC61A1-205ENST00000483956 KLHL30-AS1Q8NEE0 82 aa8.9□□□□□ -0.98
SEC61A1-205ENST00000483956 SLC25A16P16260 332 aa8.9□□□□□ -0.99
SEC61A1-205ENST00000483956 DLX1P56177 255 aa8.9□□□□□ -0.99
SEC61A1-205ENST00000483956 C10orf126Q8N4M7 172 aa8.9□□□□□ -0.99
SEC61A1-205ENST00000483956 UBTD1Q9HAC8 227 aa8.9□□□□□ -0.99
SEC61A1-205ENST00000483956 NCOR2Q9Y618 2525 aa8.89□□□□□ -0.99
SEC61A1-205ENST00000483956 DUSP14O95147 198 aaKnown RBP8.89□□□□□ -0.99
SEC61A1-205ENST00000483956 IGF2RP11717 2491 aa8.89□□□□□ -0.99
SEC61A1-205ENST00000483956 SRSF2Q01130 221 aaKnown RBP8.89□□□□□ -0.99
SEC61A1-205ENST00000483956 LAGE3Q14657 143 aa8.89□□□□□ -0.99
SEC61A1-205ENST00000483956 E7EQL1 145 aa8.88□□□□□ -0.99
SEC61A1-205ENST00000483956 IGLC6P0CF74 106 aa8.88□□□□□ -0.99
SEC61A1-205ENST00000483956 PRR25Q96S07 402 aa8.88□□□□□ -0.99
SEC61A1-205ENST00000483956 KLK15Q9H2R5 256 aa8.88□□□□□ -0.99
SEC61A1-205ENST00000483956 KLK5Q9Y337 293 aaPredicted RBP8.88□□□□□ -0.99
SEC61A1-205ENST00000483956 ZZEF1O43149 2961 aa8.88□□□□□ -0.99
SEC61A1-205ENST00000483956 BAALCQ8WXS3 180 aa8.88□□□□□ -0.99
SEC61A1-205ENST00000483956 APC2O95996 2303 aa8.88□□□□□ -0.99
SEC61A1-205ENST00000483956 PKDREJQ9NTG1 2253 aa8.88□□□□□ -0.99
SEC61A1-205ENST00000483956 ZGRF1Q86YA3 2104 aa8.88□□□□□ -0.99
SEC61A1-205ENST00000483956 TIMM23O14925 209 aa8.88□□□□□ -0.99
SEC61A1-205ENST00000483956 COX7A1P24310 79 aa8.88□□□□□ -0.99
SEC61A1-205ENST00000483956 PRB3Q04118 309 aaPredicted RBP8.88□□□□□ -0.99
SEC61A1-205ENST00000483956 ZNF575Q86XF7 245 aa8.88□□□□□ -0.99
SEC61A1-205ENST00000483956 CNFNQ9BYD5 112 aa8.88□□□□□ -0.99
SEC61A1-205ENST00000483956 A4D1N5 150 aa8.87□□□□□ -0.99
SEC61A1-205ENST00000483956 NPFFO15130 113 aa8.87□□□□□ -0.99
SEC61A1-205ENST00000483956 NBR2O15453 112 aa8.87□□□□□ -0.99
SEC61A1-205ENST00000483956 ZNF80P51504 273 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms