RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 ZNF256Q9Y2P7 627 aaPredicted RBP6.07□□□□□ -1.44
COL4A5-205ENST00000483338 IGLV2-18A0A075B6J9 118 aa6.06□□□□□ -1.44
COL4A5-205ENST00000483338 H7C1H1 209 aa6.06□□□□□ -1.44
COL4A5-205ENST00000483338 PRDX2P32119 198 aa6.06□□□□□ -1.44
COL4A5-205ENST00000483338 ATXN8Q156A1 80 aa6.06□□□□□ -1.44
COL4A5-205ENST00000483338 PLA2G2CQ5R387 149 aa6.06□□□□□ -1.44
COL4A5-205ENST00000483338 SPINK14Q6IE38 97 aa6.06□□□□□ -1.44
COL4A5-205ENST00000483338 SPTBN4Q9H254 2564 aa6.06□□□□□ -1.44
COL4A5-205ENST00000483338 A0A0J9YY99 117 aa6.06□□□□□ -1.44
COL4A5-205ENST00000483338 H7C2G1 150 aa6.06□□□□□ -1.44
COL4A5-205ENST00000483338 SPINT2O43291 252 aa6.06□□□□□ -1.44
COL4A5-205ENST00000483338 IGHV3-33P01772 117 aa6.06□□□□□ -1.44
COL4A5-205ENST00000483338 ATP5G1P05496 136 aa6.06□□□□□ -1.44
COL4A5-205ENST00000483338 P0DMU3 169 aa6.06□□□□□ -1.44
COL4A5-205ENST00000483338 FAM231AP0DMU4 169 aa6.06□□□□□ -1.44
COL4A5-205ENST00000483338 FAM231CP0DMU5 169 aa6.06□□□□□ -1.44
COL4A5-205ENST00000483338 Q6ZS46 218 aa6.06□□□□□ -1.44
COL4A5-205ENST00000483338 TMEM86BQ8N661 226 aa6.06□□□□□ -1.44
COL4A5-205ENST00000483338 SMCR5Q8TEV8 140 aa6.06□□□□□ -1.44
COL4A5-205ENST00000483338 DEFB127Q9H1M4 99 aa6.06□□□□□ -1.44
COL4A5-205ENST00000483338 MSRB1Q9NZV6 116 aa6.06□□□□□ -1.44
COL4A5-205ENST00000483338 C2orf82Q6UX34 121 aa6.06□□□□□ -1.44
COL4A5-205ENST00000483338 SLC25A39Q9BZJ4 359 aaPredicted RBP6.06□□□□□ -1.44
COL4A5-205ENST00000483338 MRPL36Q9P0J6 103 aaKnown RBP6.06□□□□□ -1.44
COL4A5-205ENST00000483338 NBL1P41271 181 aa6.05□□□□□ -1.44
COL4A5-205ENST00000483338 DEFB121Q5J5C9 76 aa6.05□□□□□ -1.44
COL4A5-205ENST00000483338 Q8IYB0 196 aa6.05□□□□□ -1.44
COL4A5-205ENST00000483338 NFAM1Q8NET5 270 aaPredicted RBP6.05□□□□□ -1.44
COL4A5-205ENST00000483338 METTL26Q96S19 204 aa6.05□□□□□ -1.44
COL4A5-205ENST00000483338 OTORQ9NRC9 128 aa6.05□□□□□ -1.44
COL4A5-205ENST00000483338 PLCE1Q9P212 2302 aa6.05□□□□□ -1.44
COL4A5-205ENST00000483338 IGHV5-10-1A0A0J9YXX1 117 aa6.05□□□□□ -1.44
COL4A5-205ENST00000483338 ZNF503-AS2A6NEH8 195 aa6.05□□□□□ -1.44
COL4A5-205ENST00000483338 H7C423 109 aa6.05□□□□□ -1.44
COL4A5-205ENST00000483338 HERVK_113P61574 105 aa6.05□□□□□ -1.44
COL4A5-205ENST00000483338 CCL11P51671 97 aa6.05□□□□□ -1.44
COL4A5-205ENST00000483338 FAM27E3Q08E93 113 aa6.05□□□□□ -1.44
COL4A5-205ENST00000483338 FAM90A1Q86YD7 464 aa6.05□□□□□ -1.44
COL4A5-205ENST00000483338 C8orf49Q96NF6 230 aa6.05□□□□□ -1.44
COL4A5-205ENST00000483338 PRR25Q96S07 402 aa6.05□□□□□ -1.44
COL4A5-205ENST00000483338 SPANXDQ9BXN6 97 aa6.05□□□□□ -1.44
COL4A5-205ENST00000483338 TRAV12-1A0A0B4J245 112 aa6.04□□□□□ -1.44
COL4A5-205ENST00000483338 A0A0G2JNJ9 132 aa6.04□□□□□ -1.44
COL4A5-205ENST00000483338 TRBV6-1A0A0K0K1D8 114 aa6.04□□□□□ -1.44
COL4A5-205ENST00000483338 WNT9BO14905 357 aa6.04□□□□□ -1.44
COL4A5-205ENST00000483338 Q9UFV3 132 aa6.04□□□□□ -1.44
COL4A5-205ENST00000483338 C10orf142B7Z368 130 aa6.04□□□□□ -1.44
COL4A5-205ENST00000483338 TMEM170BQ5T4T1 132 aa6.04□□□□□ -1.44
COL4A5-205ENST00000483338 RUSC1-AS1Q66K80 236 aa6.04□□□□□ -1.44
COL4A5-205ENST00000483338 GNG12Q9UBI6 72 aa6.04□□□□□ -1.44
COL4A5-205ENST00000483338 V9GYY9 64 aa6.04□□□□□ -1.44
COL4A5-205ENST00000483338 PFN2P35080 140 aa6.04□□□□□ -1.44
COL4A5-205ENST00000483338 NSUN5P1Q3KNT7 163 aa6.04□□□□□ -1.44
COL4A5-205ENST00000483338 TMEM263Q8WUH6 116 aaKnown RBP6.04□□□□□ -1.44
COL4A5-205ENST00000483338 TPSG1Q9NRR2 321 aa6.04□□□□□ -1.44
COL4A5-205ENST00000483338 METRNQ9UJH8 293 aa6.04□□□□□ -1.44
COL4A5-205ENST00000483338 NCOR2Q9Y618 2525 aa6.03□□□□□ -1.44
COL4A5-205ENST00000483338 TRAV13-1A0A0B4J241 112 aa6.03□□□□□ -1.44
COL4A5-205ENST00000483338 LY6LH3BQJ8 138 aa6.03□□□□□ -1.44
COL4A5-205ENST00000483338 J3QQQ9 107 aa6.03□□□□□ -1.44
COL4A5-205ENST00000483338 RFPL3SP0C7P2 107 aa6.03□□□□□ -1.44
COL4A5-205ENST00000483338 COX6A1P12074 109 aa6.03□□□□□ -1.44
COL4A5-205ENST00000483338 ZNF415Q09FC8 603 aa6.03□□□□□ -1.44
COL4A5-205ENST00000483338 DEFB108BQ8NET1 73 aa6.03□□□□□ -1.44
COL4A5-205ENST00000483338 C10orf105Q8TEF2 133 aa6.03□□□□□ -1.44
COL4A5-205ENST00000483338 CFAP47Q6ZTR5 3102 aa6.03□□□□□ -1.44
COL4A5-205ENST00000483338 LAGE3Q14657 143 aa6.03□□□□□ -1.44
COL4A5-205ENST00000483338 TMEM75Q8N9X5 138 aa6.03□□□□□ -1.44
COL4A5-205ENST00000483338 EEF1AKMT3Q96AZ1 226 aa6.03□□□□□ -1.44
COL4A5-205ENST00000483338 BEX4Q9NWD9 120 aaPredicted RBP6.03□□□□□ -1.44
COL4A5-205ENST00000483338 UPK2O00526 184 aa6.03□□□□□ -1.44
COL4A5-205ENST00000483338 C5orf38Q86SI9 138 aa6.03□□□□□ -1.44
COL4A5-205ENST00000483338 THAP8Q8NA92 274 aa6.03□□□□□ -1.44
COL4A5-205ENST00000483338 MBD3L2Q8NHZ7 208 aaPredicted RBP6.03□□□□□ -1.44
COL4A5-205ENST00000483338 SHANK2-AS3Q9BTD1 123 aa6.03□□□□□ -1.44
COL4A5-205ENST00000483338 HES7Q9BYE0 225 aa6.03□□□□□ -1.44
COL4A5-205ENST00000483338 FRYLO94915 3013 aa6.02□□□□□ -1.44
COL4A5-205ENST00000483338 ABCA4P78363 2273 aa6.02□□□□□ -1.45
COL4A5-205ENST00000483338 MGAQ8IWI9 3026 aa6.02□□□□□ -1.45
COL4A5-205ENST00000483338 LY6G6EA0A0G2JKS1 128 aa6.02□□□□□ -1.45
COL4A5-205ENST00000483338 C17orf100A8MU93 164 aa6.02□□□□□ -1.45
COL4A5-205ENST00000483338 SLC25A29Q8N8R3 303 aa6.02□□□□□ -1.45
COL4A5-205ENST00000483338 C8orf31Q8N9H6 132 aa6.02□□□□□ -1.45
COL4A5-205ENST00000483338 U3KQA8 63 aa6.02□□□□□ -1.45
COL4A5-205ENST00000483338 FAM236DA0A1B0GTK5 79 aa6.02□□□□□ -1.45
COL4A5-205ENST00000483338 SH2D1AO60880 128 aa6.02□□□□□ -1.45
COL4A5-205ENST00000483338 FAM236CP0DP71 79 aa6.02□□□□□ -1.45
COL4A5-205ENST00000483338 LIFP15018 202 aa6.02□□□□□ -1.45
COL4A5-205ENST00000483338 LOXL3P58215 753 aa6.02□□□□□ -1.45
COL4A5-205ENST00000483338 HIST1H4AP62805 103 aaKnown RBP6.02□□□□□ -1.45
COL4A5-205ENST00000483338 UPK3BQ9BT76 320 aa6.02□□□□□ -1.45
COL4A5-205ENST00000483338 DPH3P1Q9H4G8 78 aa6.02□□□□□ -1.45
COL4A5-205ENST00000483338 E7EUB6 86 aa6.01□□□□□ -1.45
COL4A5-205ENST00000483338 LINC00643Q86TS7 51 aa6.01□□□□□ -1.45
COL4A5-205ENST00000483338 ZNF575Q86XF7 245 aa6.01□□□□□ -1.45
COL4A5-205ENST00000483338 ZCCHC24Q8N2G6 241 aaKnown RBP6.01□□□□□ -1.45
COL4A5-205ENST00000483338 C14orf178Q8N769 122 aaPredicted RBP6.01□□□□□ -1.45
COL4A5-205ENST00000483338 NEXN-AS1Q8NBZ9 246 aa6.01□□□□□ -1.45
COL4A5-205ENST00000483338 KLF14Q8TD94 323 aaPredicted RBP6.01□□□□□ -1.45
COL4A5-205ENST00000483338 LEAP2Q969E1 77 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms