RNA–Protein interactions for RNA: ENST00000482227.5

CNKSR1-207, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-207ENST00000482227 SRSF9Q13242 221 aaKnown RBP eCLIP11.9□□□□□ -0.5
CNKSR1-207ENST00000482227 SCGB1D4Q6XE38 83 aa11.9□□□□□ -0.5
CNKSR1-207ENST00000482227 NDUFA11Q86Y39 141 aa11.9□□□□□ -0.5
CNKSR1-207ENST00000482227 SS18L2Q9UHA2 77 aa11.9□□□□□ -0.5
CNKSR1-207ENST00000482227 MSRB2Q9Y3D2 182 aa11.9□□□□□ -0.5
CNKSR1-207ENST00000482227 LYNX1G3V0Z9 82 aa11.89□□□□□ -0.51
CNKSR1-207ENST00000482227 LYNX1P0DP58 116 aa11.89□□□□□ -0.51
CNKSR1-207ENST00000482227 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.89□□□□□ -0.51
CNKSR1-207ENST00000482227 ZGRF1Q86YA3 2104 aa11.89□□□□□ -0.51
CNKSR1-207ENST00000482227 ORMDL2Q53FV1 153 aa11.89□□□□□ -0.51
CNKSR1-207ENST00000482227 SPANXN1Q5VSR9 72 aa11.89□□□□□ -0.51
CNKSR1-207ENST00000482227 DEFB124Q8NES8 71 aa11.89□□□□□ -0.51
CNKSR1-207ENST00000482227 ANAPC13Q9BS18 74 aa11.89□□□□□ -0.51
CNKSR1-207ENST00000482227 ZNF688P0C7X2 276 aa11.88□□□□□ -0.51
CNKSR1-207ENST00000482227 DYNLRB1Q9NP97 96 aa11.88□□□□□ -0.51
CNKSR1-207ENST00000482227 TPRP12270 2363 aaKnown RBP11.88□□□□□ -0.51
CNKSR1-207ENST00000482227 SUMO2P61956 95 aaKnown RBP11.87□□□□□ -0.51
CNKSR1-207ENST00000482227 ANKRD29Q8N6D5 301 aa11.87□□□□□ -0.51
CNKSR1-207ENST00000482227 SLC50A1Q9BRV3 221 aa11.87□□□□□ -0.51
CNKSR1-207ENST00000482227 RNF223E7ERA6 249 aa11.87□□□□□ -0.51
CNKSR1-207ENST00000482227 BUB3O43684 328 aa11.87□□□□□ -0.51
CNKSR1-207ENST00000482227 NHLRC4P0CG21 123 aaPredicted RBP11.87□□□□□ -0.51
CNKSR1-207ENST00000482227 PIP4P1Q86T03 277 aa11.87□□□□□ -0.51
CNKSR1-207ENST00000482227 CITED1Q99966 193 aa11.87□□□□□ -0.51
CNKSR1-207ENST00000482227 CNOT1A5YKK6 2376 aaKnown RBP11.86□□□□□ -0.51
CNKSR1-207ENST00000482227 A8MWV9 139 aa11.86□□□□□ -0.51
CNKSR1-207ENST00000482227 H3BVH4 76 aa11.86□□□□□ -0.51
CNKSR1-207ENST00000482227 C2orf66Q6UXQ4 117 aa11.86□□□□□ -0.51
CNKSR1-207ENST00000482227 VCX2Q9H322 139 aa11.86□□□□□ -0.51
CNKSR1-207ENST00000482227 MUC6Q6W4X9 2439 aa11.86□□□□□ -0.51
CNKSR1-207ENST00000482227 TRAV8-2A0A0B4J237 113 aa11.86□□□□□ -0.51
CNKSR1-207ENST00000482227 IGHV3-66A0A0C4DH42 116 aa11.86□□□□□ -0.51
CNKSR1-207ENST00000482227 A0A0J9YY99 117 aa11.86□□□□□ -0.51
CNKSR1-207ENST00000482227 FAM90A27PA6NNH2 459 aa11.86□□□□□ -0.51
CNKSR1-207ENST00000482227 E7EQL1 145 aa11.86□□□□□ -0.51
CNKSR1-207ENST00000482227 TGFAP01135 160 aa11.86□□□□□ -0.51
CNKSR1-207ENST00000482227 CFC1BP0CG36 223 aa11.86□□□□□ -0.51
CNKSR1-207ENST00000482227 CFC1P0CG37 223 aa11.86□□□□□ -0.51
CNKSR1-207ENST00000482227 ZFAND6Q6FIF0 208 aa11.86□□□□□ -0.51
CNKSR1-207ENST00000482227 RPL39LQ96EH5 51 aaKnown RBP11.86□□□□□ -0.51
CNKSR1-207ENST00000482227 CEP250Q9BV73 2442 aa11.85□□□□□ -0.51
CNKSR1-207ENST00000482227 MGAQ8IWI9 3026 aa11.85□□□□□ -0.51
CNKSR1-207ENST00000482227 TRBV20-1A0A075B6N2 111 aa11.85□□□□□ -0.51
CNKSR1-207ENST00000482227 SPRY2O43597 315 aa11.85□□□□□ -0.51
CNKSR1-207ENST00000482227 CRYGDP07320 174 aa11.85□□□□□ -0.51
CNKSR1-207ENST00000482227 GAGE5Q13069 117 aa11.85□□□□□ -0.51
CNKSR1-207ENST00000482227 GAGE6Q13070 117 aa11.85□□□□□ -0.51
CNKSR1-207ENST00000482227 HES1Q14469 280 aa11.85□□□□□ -0.51
CNKSR1-207ENST00000482227 DPM3Q9P2X0 92 aa11.85□□□□□ -0.51
CNKSR1-207ENST00000482227 A0A0G2JNJ9 132 aa11.85□□□□□ -0.51
CNKSR1-207ENST00000482227 MAP1BP46821 2468 aaKnown RBP11.85□□□□□ -0.51
CNKSR1-207ENST00000482227 Q6ZS46 218 aa11.85□□□□□ -0.51
CNKSR1-207ENST00000482227 ZFAND3Q9H8U3 227 aa11.85□□□□□ -0.51
CNKSR1-207ENST00000482227 Q9UFV3 132 aa11.85□□□□□ -0.51
CNKSR1-207ENST00000482227 LYRM7Q5U5X0 104 aa11.84□□□□□ -0.51
CNKSR1-207ENST00000482227 PRR9Q5T870 116 aa11.84□□□□□ -0.51
CNKSR1-207ENST00000482227 TEX29Q8N6K0 151 aa11.84□□□□□ -0.51
CNKSR1-207ENST00000482227 AJUBAQ96IF1 538 aa11.84□□□□□ -0.51
CNKSR1-207ENST00000482227 IGHV3OR16-13A0A075B7E8 117 aa11.83□□□□□ -0.52
CNKSR1-207ENST00000482227 IGHV3-74A0A0B4J1X5 117 aa11.83□□□□□ -0.52
CNKSR1-207ENST00000482227 IGHV3-30P01768 117 aa11.83□□□□□ -0.52
CNKSR1-207ENST00000482227 IGHV3-30-5P0DP03 117 aa11.83□□□□□ -0.52
CNKSR1-207ENST00000482227 FAM57AQ8TBR7 257 aa11.83□□□□□ -0.52
CNKSR1-207ENST00000482227 CLPSL1A2RUU4 121 aa11.83□□□□□ -0.52
CNKSR1-207ENST00000482227 B5MCH6 92 aa11.83□□□□□ -0.52
CNKSR1-207ENST00000482227 SRD5A1P18405 259 aa11.83□□□□□ -0.52
CNKSR1-207ENST00000482227 C10orf126Q8N4M7 172 aa11.83□□□□□ -0.52
CNKSR1-207ENST00000482227 IGLV4-69A0A075B6H9 119 aa11.82□□□□□ -0.52
CNKSR1-207ENST00000482227 C11orf86A6NJI1 115 aa11.82□□□□□ -0.52
CNKSR1-207ENST00000482227 CENPVL3A0A0U1RRI6 287 aa11.82□□□□□ -0.52
CNKSR1-207ENST00000482227 TMEM262E9PQX1 116 aa11.82□□□□□ -0.52
CNKSR1-207ENST00000482227 TSHBP01222 138 aa11.82□□□□□ -0.52
CNKSR1-207ENST00000482227 TSPEAR-AS2P59090 65 aa11.82□□□□□ -0.52
CNKSR1-207ENST00000482227 WNK2Q9Y3S1 2297 aa11.81□□□□□ -0.52
CNKSR1-207ENST00000482227 CRIP2P52943 208 aaPredicted RBP11.81□□□□□ -0.52
CNKSR1-207ENST00000482227 EMP1P54849 157 aa11.81□□□□□ -0.52
CNKSR1-207ENST00000482227 M0R381 172 aa11.81□□□□□ -0.52
CNKSR1-207ENST00000482227 DUSP14O95147 198 aaKnown RBP11.81□□□□□ -0.52
CNKSR1-207ENST00000482227 IGF1P05019 195 aa11.81□□□□□ -0.52
CNKSR1-207ENST00000482227 IGFL3Q6UXB1 125 aa11.81□□□□□ -0.52
CNKSR1-207ENST00000482227 C9orf47Q6ZRZ4 202 aa11.81□□□□□ -0.52
CNKSR1-207ENST00000482227 LY6G5BQ8NDX9 201 aa11.81□□□□□ -0.52
CNKSR1-207ENST00000482227 RHODO00212 210 aa11.8□□□□□ -0.52
CNKSR1-207ENST00000482227 SCGB2A1O75556 95 aa11.8□□□□□ -0.52
CNKSR1-207ENST00000482227 C14orf178Q8N769 122 aaPredicted RBP11.8□□□□□ -0.52
CNKSR1-207ENST00000482227 ZFHX2Q9C0A1 2572 aaPredicted RBP11.8□□□□□ -0.52
CNKSR1-207ENST00000482227 CLEC3BP05452 202 aa11.8□□□□□ -0.52
CNKSR1-207ENST00000482227 SLC25A29Q8N8R3 303 aa11.8□□□□□ -0.52
CNKSR1-207ENST00000482227 IGHV3-49A0A0A0MS15 119 aa11.79□□□□□ -0.52
CNKSR1-207ENST00000482227 SLC25A20O43772 301 aa11.79□□□□□ -0.52
CNKSR1-207ENST00000482227 EIF4EBP3O60516 100 aaPredicted RBP11.79□□□□□ -0.52
CNKSR1-207ENST00000482227 SCGB1C2P0DMR2 95 aa11.79□□□□□ -0.52
CNKSR1-207ENST00000482227 PRO1854Q9UHT4 67 aa11.79□□□□□ -0.52
CNKSR1-207ENST00000482227 C15orf32Q32M92 178 aa11.79□□□□□ -0.52
CNKSR1-207ENST00000482227 AMELXQ99217 191 aa11.79□□□□□ -0.52
CNKSR1-207ENST00000482227 DCHS2Q6V1P9 2916 aa11.78□□□□□ -0.52
CNKSR1-207ENST00000482227 POLEQ07864 2286 aa11.78□□□□□ -0.52
CNKSR1-207ENST00000482227 IGHV7-81A0A0B4J1V7 117 aa11.78□□□□□ -0.52
CNKSR1-207ENST00000482227 ODF3BA8MYP8 253 aa11.78□□□□□ -0.52
CNKSR1-207ENST00000482227 CRLF1O75462 422 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms