RNA–Protein interactions for RNA: ENST00000481804.5

CCDC78-211, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,248 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-211ENST00000481804 TAL2Q16559 108 aa11.04□□□□□ -0.64
CCDC78-211ENST00000481804 CHTOPQ9Y3Y2 248 aaKnown RBP11.04□□□□□ -0.64
CCDC78-211ENST00000481804 SPRY2O43597 315 aa11.04□□□□□ -0.64
CCDC78-211ENST00000481804 SFTA2Q6UW10 78 aa11.04□□□□□ -0.64
CCDC78-211ENST00000481804 Q6ZQT7 251 aa11.04□□□□□ -0.64
CCDC78-211ENST00000481804 NRACQ8N912 160 aa11.04□□□□□ -0.64
CCDC78-211ENST00000481804 C16orf92Q96LL3 132 aa11.04□□□□□ -0.64
CCDC78-211ENST00000481804 RBAKDNA6NC62 111 aa11.03□□□□□ -0.64
CCDC78-211ENST00000481804 ODF3BA8MYP8 253 aa11.03□□□□□ -0.64
CCDC78-211ENST00000481804 F8VRH5 84 aa11.03□□□□□ -0.64
CCDC78-211ENST00000481804 RAXQ9Y2V3 346 aa11.03□□□□□ -0.64
CCDC78-211ENST00000481804 MGPP08493 103 aa11.03□□□□□ -0.64
CCDC78-211ENST00000481804 RRN3P1Q2M238 152 aa11.03□□□□□ -0.64
CCDC78-211ENST00000481804 ZNF502Q8TBZ5 544 aa11.03□□□□□ -0.64
CCDC78-211ENST00000481804 SMIM2Q9BVW6 85 aa11.03□□□□□ -0.64
CCDC78-211ENST00000481804 MRPL16Q9NX20 251 aaKnown RBP11.03□□□□□ -0.64
CCDC78-211ENST00000481804 HLA-DRB4P13762 266 aa11.02□□□□□ -0.64
CCDC78-211ENST00000481804 SRSF9Q13242 221 aaKnown RBP eCLIP11.02□□□□□ -0.64
CCDC78-211ENST00000481804 CLEC2AQ6UVW9 174 aa11.02□□□□□ -0.64
CCDC78-211ENST00000481804 C8orf86Q6ZUL3 223 aa11.02□□□□□ -0.64
CCDC78-211ENST00000481804 HLA-DRB4X5D2U9 266 aa11.02□□□□□ -0.64
CCDC78-211ENST00000481804 MYMXA0A1B0GTQ4 84 aa11.02□□□□□ -0.65
CCDC78-211ENST00000481804 SPAG8Q99932 426 aaPredicted RBP11.02□□□□□ -0.65
CCDC78-211ENST00000481804 VKORC1Q9BQB6 163 aa11.02□□□□□ -0.65
CCDC78-211ENST00000481804 LOC107984156A0A0G2JMH3 177 aa11.01□□□□□ -0.65
CCDC78-211ENST00000481804 IGHV7-4-1A0A0J9YVY3 117 aa11.01□□□□□ -0.65
CCDC78-211ENST00000481804 ATP6V0E1O15342 81 aa11.01□□□□□ -0.65
CCDC78-211ENST00000481804 HOXA3O43365 443 aaPredicted RBP11.01□□□□□ -0.65
CCDC78-211ENST00000481804 ARL17AQ8IVW1 177 aa11.01□□□□□ -0.65
CCDC78-211ENST00000481804 ZFAND3Q9H8U3 227 aa11.01□□□□□ -0.65
CCDC78-211ENST00000481804 G3V318 75 aa11.01□□□□□ -0.65
CCDC78-211ENST00000481804 ORMDL2Q53FV1 153 aa11.01□□□□□ -0.65
CCDC78-211ENST00000481804 PGPEP1Q9NXJ5 209 aa11.01□□□□□ -0.65
CCDC78-211ENST00000481804 FAM110DQ8TAY7 271 aaPredicted RBP11.01□□□□□ -0.65
CCDC78-211ENST00000481804 TMEM238LA0A1B0GVL6 79 aa11□□□□□ -0.65
CCDC78-211ENST00000481804 Q8N9W7 124 aa11□□□□□ -0.65
CCDC78-211ENST00000481804 PHLDA3Q9Y5J5 127 aa11□□□□□ -0.65
CCDC78-211ENST00000481804 A0A1B0GV72 72 aa11□□□□□ -0.65
CCDC78-211ENST00000481804 ZNF815PA8K554 130 aa11□□□□□ -0.65
CCDC78-211ENST00000481804 APOMO95445 188 aa11□□□□□ -0.65
CCDC78-211ENST00000481804 SUMO2P61956 95 aaKnown RBP11□□□□□ -0.65
CCDC78-211ENST00000481804 C14orf178Q8N769 122 aaPredicted RBP11□□□□□ -0.65
CCDC78-211ENST00000481804 EEF1AKMT3Q96AZ1 226 aa11□□□□□ -0.65
CCDC78-211ENST00000481804 NDUFS8O00217 210 aa10.99□□□□□ -0.65
CCDC78-211ENST00000481804 MRAP2Q96G30 205 aa10.99□□□□□ -0.65
CCDC78-211ENST00000481804 RPL11P62913 178 aaKnown RBP10.99□□□□□ -0.65
CCDC78-211ENST00000481804 OOSP1A8MZH6 123 aa10.99□□□□□ -0.65
CCDC78-211ENST00000481804 PRADC1Q9BSG0 188 aa10.99□□□□□ -0.65
CCDC78-211ENST00000481804 TRAV8-2A0A0B4J237 113 aa10.98□□□□□ -0.65
CCDC78-211ENST00000481804 A6NJY4 79 aa10.98□□□□□ -0.65
CCDC78-211ENST00000481804 INSL3P51460 131 aa10.98□□□□□ -0.65
CCDC78-211ENST00000481804 MINOS1Q5TGZ0 78 aa10.98□□□□□ -0.65
CCDC78-211ENST00000481804 Q8N6K4 173 aa10.98□□□□□ -0.65
CCDC78-211ENST00000481804 DEFB104AQ8WTQ1 72 aa10.98□□□□□ -0.65
CCDC78-211ENST00000481804 RPL39LQ96EH5 51 aaKnown RBP10.98□□□□□ -0.65
CCDC78-211ENST00000481804 MSRB2Q9Y3D2 182 aa10.98□□□□□ -0.65
CCDC78-211ENST00000481804 MINOS1-NBL1R4GNA1 71 aa10.98□□□□□ -0.65
CCDC78-211ENST00000481804 TRBV7-3A0A075B6L6 115 aa10.98□□□□□ -0.65
CCDC78-211ENST00000481804 SCGB1A1P11684 91 aa10.98□□□□□ -0.65
CCDC78-211ENST00000481804 ATP5G2Q06055 141 aa10.98□□□□□ -0.65
CCDC78-211ENST00000481804 C2orf66Q6UXQ4 117 aa10.98□□□□□ -0.65
CCDC78-211ENST00000481804 IGKV3-7A0A075B6H7 116 aa10.97□□□□□ -0.65
CCDC78-211ENST00000481804 ZNF418Q8TF45 676 aaPredicted RBP10.97□□□□□ -0.65
CCDC78-211ENST00000481804 CCDC140Q96MF4 163 aa10.97□□□□□ -0.65
CCDC78-211ENST00000481804 TRAV12-1A0A0B4J245 112 aa10.97□□□□□ -0.65
CCDC78-211ENST00000481804 CLPSL1A2RUU4 121 aa10.97□□□□□ -0.65
CCDC78-211ENST00000481804 IGF1P05019 195 aa10.97□□□□□ -0.65
CCDC78-211ENST00000481804 ARL3P36405 182 aa10.97□□□□□ -0.65
CCDC78-211ENST00000481804 PSMB2P49721 201 aa10.97□□□□□ -0.65
CCDC78-211ENST00000481804 LINC01549A6NIU2 74 aa10.97□□□□□ -0.65
CCDC78-211ENST00000481804 LGALS1P09382 135 aaKnown RBP10.97□□□□□ -0.65
CCDC78-211ENST00000481804 FOXC1Q12948 553 aa10.97□□□□□ -0.65
CCDC78-211ENST00000481804 OR10J6PQ8NGY7 276 aa10.96□□□□□ -0.65
CCDC78-211ENST00000481804 LINC00527Q9UJ94 153 aa10.96□□□□□ -0.65
CCDC78-211ENST00000481804 CCL21O00585 134 aa10.96□□□□□ -0.66
CCDC78-211ENST00000481804 SLC25A16P16260 332 aa10.96□□□□□ -0.66
CCDC78-211ENST00000481804 ASIPP42127 132 aa10.96□□□□□ -0.66
CCDC78-211ENST00000481804 EMP1P54849 157 aa10.96□□□□□ -0.66
CCDC78-211ENST00000481804 PRR9Q5T870 116 aa10.96□□□□□ -0.66
CCDC78-211ENST00000481804 C9orf47Q6ZRZ4 202 aa10.96□□□□□ -0.66
CCDC78-211ENST00000481804 PSMG3-AS1Q96PY0 264 aa10.96□□□□□ -0.66
CCDC78-211ENST00000481804 DPH3P1Q9H4G8 78 aa10.96□□□□□ -0.66
CCDC78-211ENST00000481804 PRSS29PA6NIE9 313 aa10.96□□□□□ -0.66
CCDC78-211ENST00000481804 LINC01548A6NM66 108 aa10.96□□□□□ -0.66
CCDC78-211ENST00000481804 ATP6V0BQ99437 205 aa10.96□□□□□ -0.66
CCDC78-211ENST00000481804 EBI3Q14213 229 aa10.95□□□□□ -0.66
CCDC78-211ENST00000481804 GLMPQ8WWB7 406 aa10.95□□□□□ -0.66
CCDC78-211ENST00000481804 DLX4Q92988 240 aaPredicted RBP10.95□□□□□ -0.66
CCDC78-211ENST00000481804 TOMM6Q96B49 74 aa10.95□□□□□ -0.66
CCDC78-211ENST00000481804 ZFP36P26651 326 aaKnown RBP10.95□□□□□ -0.66
CCDC78-211ENST00000481804 RASL10AQ92737 203 aa10.95□□□□□ -0.66
CCDC78-211ENST00000481804 DEFB1P60022 68 aa10.94□□□□□ -0.66
CCDC78-211ENST00000481804 NEXN-AS1Q8NBZ9 246 aa10.94□□□□□ -0.66
CCDC78-211ENST00000481804 BAALCQ8WXS3 180 aa10.94□□□□□ -0.66
CCDC78-211ENST00000481804 MRPL53Q96EL3 112 aaKnown RBP10.94□□□□□ -0.66
CCDC78-211ENST00000481804 SPATA25Q9BR10 227 aa10.94□□□□□ -0.66
CCDC78-211ENST00000481804 C20orf78Q9BR46 151 aa10.94□□□□□ -0.66
CCDC78-211ENST00000481804 TRAV21A0A0B4J279 112 aa10.94□□□□□ -0.66
CCDC78-211ENST00000481804 RNASE4P34096 147 aaKnown RBP10.94□□□□□ -0.66
CCDC78-211ENST00000481804 KLHL30-AS1Q8NEE0 82 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms