RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 A0A087WX48 190 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 TRAV12-3A0A0B4J271 114 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 IGKV2-24A0A0C4DH68 120 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 DAPL1A0PJW8 107 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 PGPA6NDG6 321 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 INS-IGF2F8WCM5 200 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 J3QLW9 94 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 FAM107AO95990 144 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 HLA-DQB1P01920 261 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 MT-ND6P03923 174 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 IGLV7-43P04211 117 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 CTXN2P0C2S0 81 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 SFTA3P0C7M3 94 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 SLC25A4P12235 298 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 OR10J1P30954 320 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 HRH1P35367 487 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 OPRK1P41145 380 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 GALR1P47211 349 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 CAMLGP49069 296 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 OR10A3P58181 314 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 REG3AQ06141 175 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 CATR1Q13166 79 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 MSMO1Q15800 293 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 RAB11BQ15907 218 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 C1orf137Q5JT78 98 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 TMEM236Q5W0B7 351 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 KCNIP4Q6PIL6 250 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 SLC25A34Q6PIV7 304 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 COX6B2Q6YFQ2 88 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 OR8I2Q8N0Y5 310 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 EIF4E3Q8N5X7 224 aaKnown RBP1.05□□□□□ -2.24
USH2A-204ENST00000481786 ZNF738Q8NE65 137 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 OR4D5Q8NGN0 318 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 OR8J1Q8NGP2 316 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 SUN5Q8TC36 379 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 MRPL48Q96GC5 212 aaKnown RBP1.05□□□□□ -2.24
USH2A-204ENST00000481786 SEC22AQ96IW7 307 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 C4orf36Q96KX1 117 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 TSC22D3Q99576 134 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 PRADC1Q9BSG0 188 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 TMEM59Q9BXS4 323 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 TMEM222Q9H0R3 208 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 MIXL1Q9H2W2 232 aa1.05□□□□□ -2.24
USH2A-204ENST00000481786 MRPL16Q9NX20 251 aaKnown RBP1.05□□□□□ -2.24
USH2A-204ENST00000481786 MRPL36Q9P0J6 103 aaKnown RBP1.05□□□□□ -2.24
USH2A-204ENST00000481786 TRAV8-7A0A075B6U6 113 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 A0A096LNI7 61 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 TRAV8-2A0A0B4J237 113 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 TRAV4A0A0B4J268 109 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 TRBV6-4A0A1B0GX49 114 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 J3QRE1 110 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 PEX7O00628 323 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 RGS16O15492 202 aaPredicted RBP1.04□□□□□ -2.24
USH2A-204ENST00000481786 KRASP01116 189 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 CRPP02741 224 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 TLX1NBP0CAT3 122 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 CXCL3P19876 107 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 S100A7P31151 101 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 CASQ1P31415 396 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 CBX5P45973 191 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 ARPC4P59998 168 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 HSPE1P61604 102 aaKnown RBP1.04□□□□□ -2.24
USH2A-204ENST00000481786 EIF5AP63241 154 aaKnown RBP1.04□□□□□ -2.24
USH2A-204ENST00000481786 QRFPP83859 136 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 RAB31Q13636 194 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 RHOHQ15669 191 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 MIAQ16674 131 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 WHAMMP3Q1A5X7 153 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 CCDC58Q4VC31 144 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 PRSS54Q6PEW0 395 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 ENHOQ6UWT2 76 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 Q6ZN92 141 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 Q6ZS49 121 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 LHFPL3Q86UP9 236 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 C10orf67Q8IYJ2 551 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 LGI3Q8N145 548 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 ACBD7Q8N6N7 88 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 SLC25A29Q8N8R3 303 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 C15orf56Q8N910 161 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 BPIFB6Q8NFQ5 453 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 BPIFCQ8NFQ6 507 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 OR4C5Q8NGB2 326 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 OR10P1Q8NGE3 313 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 ZNF431Q8TF32 576 aaPredicted RBP1.04□□□□□ -2.24
USH2A-204ENST00000481786 DNAJC9Q8WXX5 260 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 ARHGAP5-AS1Q96IT6 56 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 LINC00477Q96M19 166 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 GPR82Q96P67 336 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 ODF3Q96PU9 254 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 SLC29A1Q99808 456 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 RSG1Q9BU20 258 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 TMEM109Q9BVC6 243 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 PBDC1Q9BVG4 233 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 ARL2BPQ9Y2Y0 163 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 TMEM56-RWDD3S4R434 201 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 AHNAK2Q8IVF2 5795 aa1.04□□□□□ -2.24
USH2A-204ENST00000481786 TRAV6A0A075B6T7 132 aa1.03□□□□□ -2.24
USH2A-204ENST00000481786 IGKV1D-13A0A0B4J2D9 117 aa1.03□□□□□ -2.24
USH2A-204ENST00000481786 C7orf71A4D174 169 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms