RNA–Protein interactions for RNA: ENST00000481502.5

SYNE1-225, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 3

Gene SYNE1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-225ENST00000481502 M0R2Z0 102 aa6.02□□□□□ -1.45
SYNE1-225ENST00000481502 SH2D1AO60880 128 aa6.02□□□□□ -1.45
SYNE1-225ENST00000481502 CA1P00915 261 aaPredicted RBP6.02□□□□□ -1.45
SYNE1-225ENST00000481502 APOC3P02656 99 aa6.02□□□□□ -1.45
SYNE1-225ENST00000481502 RPL35AP18077 110 aaKnown RBP6.02□□□□□ -1.45
SYNE1-225ENST00000481502 ZNF80P51504 273 aaPredicted RBP6.02□□□□□ -1.45
SYNE1-225ENST00000481502 RPL19P84098 196 aaKnown RBP6.02□□□□□ -1.45
SYNE1-225ENST00000481502 PIK3CD-AS1Q5SR53 167 aa6.02□□□□□ -1.45
SYNE1-225ENST00000481502 WDR73Q6P4I2 378 aa6.02□□□□□ -1.45
SYNE1-225ENST00000481502 CLRN3Q8NCR9 226 aa6.02□□□□□ -1.45
SYNE1-225ENST00000481502 PTH2Q96A98 100 aa6.02□□□□□ -1.45
SYNE1-225ENST00000481502 RNF183Q96D59 192 aa6.02□□□□□ -1.45
SYNE1-225ENST00000481502 XCL2Q9UBD3 114 aa6.02□□□□□ -1.45
SYNE1-225ENST00000481502 TRAV9-1A0A075B6T8 112 aa6.01□□□□□ -1.45
SYNE1-225ENST00000481502 TRAV12-3A0A0B4J271 114 aa6.01□□□□□ -1.45
SYNE1-225ENST00000481502 TMEM189A5PLL7 270 aa6.01□□□□□ -1.45
SYNE1-225ENST00000481502 PGPEP1LA6NFU8 196 aa6.01□□□□□ -1.45
SYNE1-225ENST00000481502 F2Z2F3 143 aa6.01□□□□□ -1.45
SYNE1-225ENST00000481502 GATCO43716 136 aaKnown RBP6.01□□□□□ -1.45
SYNE1-225ENST00000481502 FRMD6-AS1P0C7T7 363 aa6.01□□□□□ -1.45
SYNE1-225ENST00000481502 MIFP14174 115 aa6.01□□□□□ -1.45
SYNE1-225ENST00000481502 BTN1A1Q13410 526 aa6.01□□□□□ -1.45
SYNE1-225ENST00000481502 OR5I1Q13606 314 aa6.01□□□□□ -1.45
SYNE1-225ENST00000481502 C1orf158Q8N1D5 194 aa6.01□□□□□ -1.45
SYNE1-225ENST00000481502 TSKUQ8WUA8 353 aa6.01□□□□□ -1.45
SYNE1-225ENST00000481502 RCHY1Q96PM5 261 aa6.01□□□□□ -1.45
SYNE1-225ENST00000481502 LINC01587Q99440 93 aa6.01□□□□□ -1.45
SYNE1-225ENST00000481502 SPXQ9BT56 116 aa6.01□□□□□ -1.45
SYNE1-225ENST00000481502 TMEM208Q9BTX3 173 aa6.01□□□□□ -1.45
SYNE1-225ENST00000481502 SSBP4Q9BWG4 385 aaPredicted RBP6.01□□□□□ -1.45
SYNE1-225ENST00000481502 RPP21Q9H633 154 aaKnown RBP6.01□□□□□ -1.45
SYNE1-225ENST00000481502 TRAV12-2A0A075B6T6 113 aa6□□□□□ -1.45
SYNE1-225ENST00000481502 IGKV3D-20A0A0C4DH25 116 aa6□□□□□ -1.45
SYNE1-225ENST00000481502 TEX48A0A1B0GUV7 120 aa6□□□□□ -1.45
SYNE1-225ENST00000481502 C7orf77A4D0Y5 90 aa6□□□□□ -1.45
SYNE1-225ENST00000481502 ZNF705GA8MUZ8 300 aaPredicted RBP6□□□□□ -1.45
SYNE1-225ENST00000481502 M0R036 132 aa6□□□□□ -1.45
SYNE1-225ENST00000481502 SPRY2O43597 315 aa6□□□□□ -1.45
SYNE1-225ENST00000481502 ORM1P02763 201 aa6□□□□□ -1.45
SYNE1-225ENST00000481502 OR5AL1P0C617 328 aa6□□□□□ -1.45
SYNE1-225ENST00000481502 NHLRC4P0CG21 123 aaPredicted RBP6□□□□□ -1.45
SYNE1-225ENST00000481502 RRN3P1Q2M238 152 aa6□□□□□ -1.45
SYNE1-225ENST00000481502 PRR9Q5T870 116 aa6□□□□□ -1.45
SYNE1-225ENST00000481502 PRR27Q6MZM9 219 aa6□□□□□ -1.45
SYNE1-225ENST00000481502 NHLRC2Q8NBF2 726 aa6□□□□□ -1.45
SYNE1-225ENST00000481502 OR2D3Q8NGH3 330 aa6□□□□□ -1.45
SYNE1-225ENST00000481502 TMEM263Q8WUH6 116 aaKnown RBP6□□□□□ -1.45
SYNE1-225ENST00000481502 IL36BQ9NZH7 164 aa6□□□□□ -1.45
SYNE1-225ENST00000481502 V9GYV3 84 aa6□□□□□ -1.45
SYNE1-225ENST00000481502 IGHV4-4A0A075B6R2 117 aa5.99□□□□□ -1.45
SYNE1-225ENST00000481502 SMIM27A0A1W2PRY6 76 aa5.99□□□□□ -1.45
SYNE1-225ENST00000481502 SNAI2O43623 268 aa5.99□□□□□ -1.45
SYNE1-225ENST00000481502 CIDEAO60543 219 aa5.99□□□□□ -1.45
SYNE1-225ENST00000481502 ASIPP42127 132 aa5.99□□□□□ -1.45
SYNE1-225ENST00000481502 DAZ2Q13117 558 aaKnown RBP5.99□□□□□ -1.45
SYNE1-225ENST00000481502 KIR3DS1Q14943 382 aa5.99□□□□□ -1.45
SYNE1-225ENST00000481502 RNF212Q495C1 297 aa5.99□□□□□ -1.45
SYNE1-225ENST00000481502 DEFB121Q5J5C9 76 aa5.99□□□□□ -1.45
SYNE1-225ENST00000481502 C16orf74Q96GX8 76 aa5.99□□□□□ -1.45
SYNE1-225ENST00000481502 B9D2Q9BPU9 175 aa5.99□□□□□ -1.45
SYNE1-225ENST00000481502 SPATA25Q9BR10 227 aa5.99□□□□□ -1.45
SYNE1-225ENST00000481502 TM2D3Q9BRN9 247 aa5.99□□□□□ -1.45
SYNE1-225ENST00000481502 CNFNQ9BYD5 112 aa5.99□□□□□ -1.45
SYNE1-225ENST00000481502 RNASE7Q9H1E1 156 aaKnown RBP5.99□□□□□ -1.45
SYNE1-225ENST00000481502 NAT8BQ9UHF3 227 aa5.99□□□□□ -1.45
SYNE1-225ENST00000481502 CMYA5Q8N3K9 4069 aa5.99□□□□□ -1.45
SYNE1-225ENST00000481502 IGHV3-16A0A0C4DH30 117 aa5.98□□□□□ -1.45
SYNE1-225ENST00000481502 A0A1B0GW15 77 aa5.98□□□□□ -1.45
SYNE1-225ENST00000481502 CBY3A6NI87 242 aa5.98□□□□□ -1.45
SYNE1-225ENST00000481502 ATP6V1G1O75348 118 aa5.98□□□□□ -1.45
SYNE1-225ENST00000481502 IGLC6P0CF74 106 aa5.98□□□□□ -1.45
SYNE1-225ENST00000481502 RBMY1A1P0DJD3 496 aaKnown RBP5.98□□□□□ -1.45
SYNE1-225ENST00000481502 RBMY1CP0DJD4 496 aa5.98□□□□□ -1.45
SYNE1-225ENST00000481502 S100PP25815 95 aa5.98□□□□□ -1.45
SYNE1-225ENST00000481502 S100A4P26447 101 aaKnown RBP5.98□□□□□ -1.45
SYNE1-225ENST00000481502 FXYD7P58549 80 aa5.98□□□□□ -1.45
SYNE1-225ENST00000481502 CACNG7P62955 275 aa5.98□□□□□ -1.45
SYNE1-225ENST00000481502 ZNF415Q09FC8 603 aa5.98□□□□□ -1.45
SYNE1-225ENST00000481502 RBMY1FQ15415 496 aaKnown RBP5.98□□□□□ -1.45
SYNE1-225ENST00000481502 LGALS9BQ3B8N2 356 aa5.98□□□□□ -1.45
SYNE1-225ENST00000481502 COX19Q49B96 90 aa5.98□□□□□ -1.45
SYNE1-225ENST00000481502 KCNIP4Q6PIL6 250 aa5.98□□□□□ -1.45
SYNE1-225ENST00000481502 RASL11AQ6T310 242 aa5.98□□□□□ -1.45
SYNE1-225ENST00000481502 ATP5L2Q7Z4Y8 100 aa5.98□□□□□ -1.45
SYNE1-225ENST00000481502 ZNF575Q86XF7 245 aa5.98□□□□□ -1.45
SYNE1-225ENST00000481502 MRAPQ8TCY5 172 aa5.98□□□□□ -1.45
SYNE1-225ENST00000481502 RNASE8Q8TDE3 154 aaKnown RBP5.98□□□□□ -1.45
SYNE1-225ENST00000481502 C18orf15Q96N68 181 aa5.98□□□□□ -1.45
SYNE1-225ENST00000481502 OVOL2Q9BRP0 275 aa5.98□□□□□ -1.45
SYNE1-225ENST00000481502 ZMAT4Q9H898 229 aa5.98□□□□□ -1.45
SYNE1-225ENST00000481502 SCRT2Q9NQ03 307 aa5.98□□□□□ -1.45
SYNE1-225ENST00000481502 PGPEP1Q9NXJ5 209 aa5.98□□□□□ -1.45
SYNE1-225ENST00000481502 C11orf21Q9P2W6 132 aa5.98□□□□□ -1.45
SYNE1-225ENST00000481502 DNHD1Q96M86 4753 aa5.98□□□□□ -1.45
SYNE1-225ENST00000481502 DNAH3Q8TD57 4116 aa5.97□□□□□ -1.45
SYNE1-225ENST00000481502 J3KRW8 73 aa5.97□□□□□ -1.45
SYNE1-225ENST00000481502 TYMSP04818 313 aa5.97□□□□□ -1.45
SYNE1-225ENST00000481502 S100A8P05109 93 aa5.97□□□□□ -1.45
SYNE1-225ENST00000481502 PRB4P10163 310 aaPredicted RBP5.97□□□□□ -1.45
SYNE1-225ENST00000481502 TCL1AP56279 114 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms