RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 FAT2Q9NYQ8 4349 aa11.77□□□□□ -0.52
HSPG2-209ENST00000480900 DNAH2Q9P225 4427 aa11.77□□□□□ -0.52
HSPG2-209ENST00000480900 PAX4O43316 350 aa11.77□□□□□ -0.53
HSPG2-209ENST00000480900 ESRGQ1W209 222 aa11.77□□□□□ -0.53
HSPG2-209ENST00000480900 C8orf49Q96NF6 230 aa11.77□□□□□ -0.53
HSPG2-209ENST00000480900 NKX6-2Q9C056 277 aaPredicted RBP11.77□□□□□ -0.53
HSPG2-209ENST00000480900 MRPS16Q9Y3D3 137 aaKnown RBP11.77□□□□□ -0.53
HSPG2-209ENST00000480900 HMSDA8MTL9 139 aa11.76□□□□□ -0.53
HSPG2-209ENST00000480900 M0R2P5 195 aa11.76□□□□□ -0.53
HSPG2-209ENST00000480900 GNRH2O43555 120 aa11.76□□□□□ -0.53
HSPG2-209ENST00000480900 TYMSP04818 313 aa11.76□□□□□ -0.53
HSPG2-209ENST00000480900 FHL2Q14192 279 aa11.76□□□□□ -0.53
HSPG2-209ENST00000480900 ZFP69Q49AA0 526 aa11.76□□□□□ -0.53
HSPG2-209ENST00000480900 Q9H8V8 135 aa11.76□□□□□ -0.53
HSPG2-209ENST00000480900 ICOSQ9Y6W8 199 aa11.76□□□□□ -0.53
HSPG2-209ENST00000480900 MAP1LC3B2A6NCE7 125 aa11.75□□□□□ -0.53
HSPG2-209ENST00000480900 GCGP01275 180 aa11.75□□□□□ -0.53
HSPG2-209ENST00000480900 ZNF80P51504 273 aaPredicted RBP11.75□□□□□ -0.53
HSPG2-209ENST00000480900 CRYBA4P53673 196 aa11.75□□□□□ -0.53
HSPG2-209ENST00000480900 FGF8P55075 233 aaPredicted RBP11.75□□□□□ -0.53
HSPG2-209ENST00000480900 UBE2G2P60604 165 aa11.75□□□□□ -0.53
HSPG2-209ENST00000480900 SMUG1Q53HV7 270 aa11.75□□□□□ -0.53
HSPG2-209ENST00000480900 SAPCD1Q5SSQ6 148 aa11.75□□□□□ -0.53
HSPG2-209ENST00000480900 PRNTQ86SH4 94 aa11.75□□□□□ -0.53
HSPG2-209ENST00000480900 OR11H4Q8NGC9 324 aa11.75□□□□□ -0.53
HSPG2-209ENST00000480900 MAP1LC3BQ9GZQ8 125 aa11.75□□□□□ -0.53
HSPG2-209ENST00000480900 HHLA3Q9XRX5 114 aa11.75□□□□□ -0.53
HSPG2-209ENST00000480900 TRGV4A0A0C4DH28 118 aa11.74□□□□□ -0.53
HSPG2-209ENST00000480900 A0A0D9SG52 128 aa11.74□□□□□ -0.53
HSPG2-209ENST00000480900 FAM74A7A6NL05 159 aa11.74□□□□□ -0.53
HSPG2-209ENST00000480900 IFNA7P01567 189 aa11.74□□□□□ -0.53
HSPG2-209ENST00000480900 PFN1P07737 140 aaKnown RBP11.74□□□□□ -0.53
HSPG2-209ENST00000480900 SFTA3P0C7M3 94 aa11.74□□□□□ -0.53
HSPG2-209ENST00000480900 TTC32Q5I0X7 151 aa11.74□□□□□ -0.53
HSPG2-209ENST00000480900 ZNF479Q96JC4 524 aa11.74□□□□□ -0.53
HSPG2-209ENST00000480900 PKHD1P08F94 4074 aa11.74□□□□□ -0.53
HSPG2-209ENST00000480900 TRAV4A0A0B4J268 109 aa11.73□□□□□ -0.53
HSPG2-209ENST00000480900 PEX7O00628 323 aa11.73□□□□□ -0.53
HSPG2-209ENST00000480900 PPT1P50897 306 aa11.73□□□□□ -0.53
HSPG2-209ENST00000480900 MRPL23Q16540 153 aaKnown RBP11.73□□□□□ -0.53
HSPG2-209ENST00000480900 C6orf223Q8N319 242 aa11.73□□□□□ -0.53
HSPG2-209ENST00000480900 HIST1H2BAQ96A08 127 aa11.73□□□□□ -0.53
HSPG2-209ENST00000480900 C11orf21Q9P2W6 132 aa11.73□□□□□ -0.53
HSPG2-209ENST00000480900 TRAV34A0A0B4J273 112 aa11.72□□□□□ -0.53
HSPG2-209ENST00000480900 BCL2L11O43521 198 aa11.72□□□□□ -0.53
HSPG2-209ENST00000480900 SEC11BP0C7V7 166 aa11.72□□□□□ -0.53
HSPG2-209ENST00000480900 STOML3Q8TAV4 291 aa11.72□□□□□ -0.53
HSPG2-209ENST00000480900 LINC00479Q96M42 142 aa11.72□□□□□ -0.53
HSPG2-209ENST00000480900 ARL2-SNX15V9GYD0 113 aa11.72□□□□□ -0.53
HSPG2-209ENST00000480900 A0A1W2PPQ1 181 aa11.71□□□□□ -0.53
HSPG2-209ENST00000480900 KANTRA0A1W2PQU2 76 aa11.71□□□□□ -0.53
HSPG2-209ENST00000480900 UMAD1C9J7I0 102 aa11.71□□□□□ -0.53
HSPG2-209ENST00000480900 FHITP49789 147 aa11.71□□□□□ -0.53
HSPG2-209ENST00000480900 Q86TA4 180 aa11.71□□□□□ -0.53
HSPG2-209ENST00000480900 OR4C5Q8NGB2 326 aa11.71□□□□□ -0.53
HSPG2-209ENST00000480900 TCEAL7Q9BRU2 100 aa11.71□□□□□ -0.53
HSPG2-209ENST00000480900 NEGR1Q7Z3B1 354 aa11.7□□□□□ -0.54
HSPG2-209ENST00000480900 C9orf85Q96MD7 179 aa11.7□□□□□ -0.54
HSPG2-209ENST00000480900 ZNF471Q9BX82 626 aaPredicted RBP11.7□□□□□ -0.54
HSPG2-209ENST00000480900 KRTAP1-5Q9BYS1 174 aa11.7□□□□□ -0.54
HSPG2-209ENST00000480900 ORM1P02763 201 aa11.69□□□□□ -0.54
HSPG2-209ENST00000480900 EIF5AP63241 154 aaKnown RBP11.69□□□□□ -0.54
HSPG2-209ENST00000480900 PCNPQ8WW12 178 aaKnown RBP11.69□□□□□ -0.54
HSPG2-209ENST00000480900 C9JCJ5 164 aa11.68□□□□□ -0.54
HSPG2-209ENST00000480900 K7EQD1 137 aa11.68□□□□□ -0.54
HSPG2-209ENST00000480900 GYPEP15421 78 aa11.68□□□□□ -0.54
HSPG2-209ENST00000480900 BTF3P20290 206 aaKnown RBP11.68□□□□□ -0.54
HSPG2-209ENST00000480900 SRIP30626 198 aa11.68□□□□□ -0.54
HSPG2-209ENST00000480900 ZNF876PQ49A33 203 aa11.68□□□□□ -0.54
HSPG2-209ENST00000480900 DPPA3Q6W0C5 159 aa11.68□□□□□ -0.54
HSPG2-209ENST00000480900 FAM213BQ8TBF2 198 aa11.68□□□□□ -0.54
HSPG2-209ENST00000480900 MBD3L1Q8WWY6 194 aa11.68□□□□□ -0.54
HSPG2-209ENST00000480900 PTH2Q96A98 100 aa11.68□□□□□ -0.54
HSPG2-209ENST00000480900 FMC1Q96HJ9 113 aa11.68□□□□□ -0.54
HSPG2-209ENST00000480900 FABP5P3A8MUU1 101 aa11.67□□□□□ -0.54
HSPG2-209ENST00000480900 SIVA1O15304 175 aa11.67□□□□□ -0.54
HSPG2-209ENST00000480900 CIDEAO60543 219 aa11.67□□□□□ -0.54
HSPG2-209ENST00000480900 NXPH4O95158 308 aa11.67□□□□□ -0.54
HSPG2-209ENST00000480900 CST9LP1Q5W188 147 aa11.67□□□□□ -0.54
HSPG2-209ENST00000480900 LYPD5Q6UWN5 251 aa11.67□□□□□ -0.54
HSPG2-209ENST00000480900 COX8CQ7Z4L0 72 aa11.67□□□□□ -0.54
HSPG2-209ENST00000480900 SFT2D1Q8WV19 159 aa11.67□□□□□ -0.54
HSPG2-209ENST00000480900 ZFP30Q9Y2G7 519 aa11.67□□□□□ -0.54
HSPG2-209ENST00000480900 PKD1P98161 4303 aa11.67□□□□□ -0.54
HSPG2-209ENST00000480900 TRBV6-1A0A0K0K1D8 114 aa11.66□□□□□ -0.54
HSPG2-209ENST00000480900 PFDN1O60925 122 aa11.66□□□□□ -0.54
HSPG2-209ENST00000480900 RNASE3P12724 160 aaKnown RBP11.66□□□□□ -0.54
HSPG2-209ENST00000480900 GATA1P15976 413 aaPredicted RBP11.66□□□□□ -0.54
HSPG2-209ENST00000480900 UBE2G1P62253 170 aa11.66□□□□□ -0.54
HSPG2-209ENST00000480900 TNP2Q05952 138 aa11.66□□□□□ -0.54
HSPG2-209ENST00000480900 TMUB2Q71RG4 321 aa11.66□□□□□ -0.54
HSPG2-209ENST00000480900 TXNDC17Q9BRA2 123 aa11.66□□□□□ -0.54
HSPG2-209ENST00000480900 IGKV3D-20A0A0C4DH25 116 aa11.65□□□□□ -0.54
HSPG2-209ENST00000480900 RS1O15537 224 aa11.65□□□□□ -0.54
HSPG2-209ENST00000480900 PAGE4O60829 102 aa11.65□□□□□ -0.54
HSPG2-209ENST00000480900 TPT1P13693 172 aaKnown RBP11.65□□□□□ -0.54
HSPG2-209ENST00000480900 ZNF506Q5JVG8 444 aa11.65□□□□□ -0.54
HSPG2-209ENST00000480900 CFAP126Q5VTH2 177 aa11.65□□□□□ -0.54
HSPG2-209ENST00000480900 SH2D6Q7Z4S9 175 aa11.65□□□□□ -0.54
HSPG2-209ENST00000480900 ZC2HC1AQ96GY0 325 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms