RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 Q8N1X5 172 aa10.41□□□□□ -0.74
LIMS3-203ENST00000480744 KCNRGQ8N5I3 272 aa10.41□□□□□ -0.74
LIMS3-203ENST00000480744 SPXQ9BT56 116 aa10.41□□□□□ -0.74
LIMS3-203ENST00000480744 SCRT2Q9NQ03 307 aa10.41□□□□□ -0.74
LIMS3-203ENST00000480744 TNFRSF18Q9Y5U5 241 aa10.41□□□□□ -0.74
LIMS3-203ENST00000480744 A0A1W2PPV4 95 aa10.4□□□□□ -0.74
LIMS3-203ENST00000480744 HMSDA8MTL9 139 aa10.4□□□□□ -0.74
LIMS3-203ENST00000480744 K7EQD1 137 aa10.4□□□□□ -0.74
LIMS3-203ENST00000480744 GYPEP15421 78 aa10.4□□□□□ -0.74
LIMS3-203ENST00000480744 FUSP35637 526 aaKnown RBP eCLIP10.4□□□□□ -0.74
LIMS3-203ENST00000480744 ERVFC1-1P60608 527 aa10.4□□□□□ -0.74
LIMS3-203ENST00000480744 GOLT1AQ6ZVE7 132 aa10.4□□□□□ -0.74
LIMS3-203ENST00000480744 TCTE3Q8IZS6 198 aa10.4□□□□□ -0.74
LIMS3-203ENST00000480744 OR10G4Q8NGN3 311 aa10.4□□□□□ -0.74
LIMS3-203ENST00000480744 OR10G9Q8NGN4 311 aa10.4□□□□□ -0.74
LIMS3-203ENST00000480744 OR10G7Q8NGN6 311 aa10.4□□□□□ -0.74
LIMS3-203ENST00000480744 RASL10AQ92737 203 aa10.4□□□□□ -0.74
LIMS3-203ENST00000480744 LY96Q9Y6Y9 160 aa10.4□□□□□ -0.74
LIMS3-203ENST00000480744 BORCS7-ASMTA0A0B4J1R7 106 aa10.39□□□□□ -0.75
LIMS3-203ENST00000480744 F6UZH7 168 aa10.39□□□□□ -0.75
LIMS3-203ENST00000480744 WFDC10BQ8IUB3 73 aa10.39□□□□□ -0.75
LIMS3-203ENST00000480744 TMED6Q8WW62 240 aa10.39□□□□□ -0.75
LIMS3-203ENST00000480744 TRAV9-2A0A087WT02 112 aa10.38□□□□□ -0.75
LIMS3-203ENST00000480744 TRAV8-1A0A0A6YYK1 113 aa10.38□□□□□ -0.75
LIMS3-203ENST00000480744 TAAR5O14804 337 aa10.38□□□□□ -0.75
LIMS3-203ENST00000480744 GNRH2O43555 120 aa10.38□□□□□ -0.75
LIMS3-203ENST00000480744 ORM1P02763 201 aa10.38□□□□□ -0.75
LIMS3-203ENST00000480744 CDC34P49427 236 aaPredicted RBP10.38□□□□□ -0.75
LIMS3-203ENST00000480744 GNG5P63218 68 aa10.38□□□□□ -0.75
LIMS3-203ENST00000480744 SERF2P84101 59 aa10.38□□□□□ -0.75
LIMS3-203ENST00000480744 ZNF726P1Q15940 193 aa10.38□□□□□ -0.75
LIMS3-203ENST00000480744 PQLC2Q6ZP29 291 aa10.38□□□□□ -0.75
LIMS3-203ENST00000480744 NFE4Q86UQ8 179 aa10.38□□□□□ -0.75
LIMS3-203ENST00000480744 IQCF2Q8IXL9 164 aa10.38□□□□□ -0.75
LIMS3-203ENST00000480744 OR4C5Q8NGB2 326 aa10.38□□□□□ -0.75
LIMS3-203ENST00000480744 TRAV4A0A0B4J268 109 aa10.37□□□□□ -0.75
LIMS3-203ENST00000480744 TRAV21A0A0B4J279 112 aa10.37□□□□□ -0.75
LIMS3-203ENST00000480744 C9JCJ5 164 aa10.37□□□□□ -0.75
LIMS3-203ENST00000480744 M0R2P5 195 aa10.37□□□□□ -0.75
LIMS3-203ENST00000480744 ARL14EPLP0DKL9 152 aa10.37□□□□□ -0.75
LIMS3-203ENST00000480744 RAB24Q969Q5 203 aa10.37□□□□□ -0.75
LIMS3-203ENST00000480744 TXNDC17Q9BRA2 123 aa10.37□□□□□ -0.75
LIMS3-203ENST00000480744 TREM1Q9NP99 234 aa10.37□□□□□ -0.75
LIMS3-203ENST00000480744 IGHV3-16A0A0C4DH30 117 aa10.36□□□□□ -0.75
LIMS3-203ENST00000480744 BCL2L11O43521 198 aa10.36□□□□□ -0.75
LIMS3-203ENST00000480744 TYMSP04818 313 aa10.36□□□□□ -0.75
LIMS3-203ENST00000480744 STAG3L2P0CL84 134 aa10.36□□□□□ -0.75
LIMS3-203ENST00000480744 STAG3L3P0CL85 134 aa10.36□□□□□ -0.75
LIMS3-203ENST00000480744 DNAH10OSP0CZ25 163 aa10.36□□□□□ -0.75
LIMS3-203ENST00000480744 EVI2AP22794 236 aa10.36□□□□□ -0.75
LIMS3-203ENST00000480744 TDRG1Q3Y452 100 aa10.36□□□□□ -0.75
LIMS3-203ENST00000480744 TMUB2Q71RG4 321 aa10.36□□□□□ -0.75
LIMS3-203ENST00000480744 TVP23CQ96ET8 276 aa10.36□□□□□ -0.75
LIMS3-203ENST00000480744 SGK494Q96LW2 274 aa10.36□□□□□ -0.75
LIMS3-203ENST00000480744 SDF2L1Q9HCN8 221 aa10.36□□□□□ -0.75
LIMS3-203ENST00000480744 PGPEP1Q9NXJ5 209 aa10.36□□□□□ -0.75
LIMS3-203ENST00000480744 MSRB1Q9NZV6 116 aa10.36□□□□□ -0.75
LIMS3-203ENST00000480744 A0A0D9SG52 128 aa10.35□□□□□ -0.75
LIMS3-203ENST00000480744 LOC100131303A0A0U1RQF7 123 aa10.35□□□□□ -0.75
LIMS3-203ENST00000480744 AKAP14Q86UN6 197 aa10.35□□□□□ -0.75
LIMS3-203ENST00000480744 NHLRC2Q8NBF2 726 aa10.35□□□□□ -0.75
LIMS3-203ENST00000480744 NDFIP1Q9BT67 221 aa10.35□□□□□ -0.75
LIMS3-203ENST00000480744 MBP02144 154 aa10.34□□□□□ -0.75
LIMS3-203ENST00000480744 C1QBP02746 253 aa10.34□□□□□ -0.75
LIMS3-203ENST00000480744 LGALSLQ3ZCW2 172 aaPredicted RBP10.34□□□□□ -0.75
LIMS3-203ENST00000480744 ARL6IP6Q8N6S5 226 aa10.34□□□□□ -0.75
LIMS3-203ENST00000480744 KCNS1Q96KK3 526 aa10.34□□□□□ -0.75
LIMS3-203ENST00000480744 ZNF471Q9BX82 626 aaPredicted RBP10.34□□□□□ -0.75
LIMS3-203ENST00000480744 A0A087WTM6 91 aa10.33□□□□□ -0.76
LIMS3-203ENST00000480744 CRYGDP07320 174 aa10.33□□□□□ -0.76
LIMS3-203ENST00000480744 GCHFRP30047 84 aa10.33□□□□□ -0.76
LIMS3-203ENST00000480744 PPT1P50897 306 aa10.33□□□□□ -0.76
LIMS3-203ENST00000480744 CDPF1Q6NVV7 123 aa10.33□□□□□ -0.76
LIMS3-203ENST00000480744 SUN5Q8TC36 379 aa10.33□□□□□ -0.76
LIMS3-203ENST00000480744 KANTRA0A1W2PQU2 76 aa10.32□□□□□ -0.76
LIMS3-203ENST00000480744 FBLL1A6NHQ2 334 aaKnown RBP10.32□□□□□ -0.76
LIMS3-203ENST00000480744 GATA1P15976 413 aaPredicted RBP10.32□□□□□ -0.76
LIMS3-203ENST00000480744 FHITP49789 147 aa10.32□□□□□ -0.76
LIMS3-203ENST00000480744 AKR1C8PQ5T2L2 129 aa10.32□□□□□ -0.76
LIMS3-203ENST00000480744 ACTR3CQ9C0K3 210 aaPredicted RBP10.32□□□□□ -0.76
LIMS3-203ENST00000480744 CTXND1A0A1B0GTU2 59 aa10.31□□□□□ -0.76
LIMS3-203ENST00000480744 K7EP13 123 aa10.31□□□□□ -0.76
LIMS3-203ENST00000480744 K7EQM0 130 aa10.31□□□□□ -0.76
LIMS3-203ENST00000480744 TCRAP04437 139 aa10.31□□□□□ -0.76
LIMS3-203ENST00000480744 FGF8P55075 233 aaPredicted RBP10.31□□□□□ -0.76
LIMS3-203ENST00000480744 ZNF876PQ49A33 203 aa10.31□□□□□ -0.76
LIMS3-203ENST00000480744 SH2D6Q7Z4S9 175 aa10.31□□□□□ -0.76
LIMS3-203ENST00000480744 C10orf126Q8N4M7 172 aa10.31□□□□□ -0.76
LIMS3-203ENST00000480744 C5orf17Q8NAS9 161 aa10.31□□□□□ -0.76
LIMS3-203ENST00000480744 IGHV3-73A0A0B4J1V6 119 aa10.3□□□□□ -0.76
LIMS3-203ENST00000480744 SERTM2A0A1B0GWG4 89 aa10.3□□□□□ -0.76
LIMS3-203ENST00000480744 EPM2AB3EWF7 344 aa10.3□□□□□ -0.76
LIMS3-203ENST00000480744 GGTLC3B5MD39 225 aa10.3□□□□□ -0.76
LIMS3-203ENST00000480744 PFDN1O60925 122 aa10.3□□□□□ -0.76
LIMS3-203ENST00000480744 CXorf1O96002 111 aa10.3□□□□□ -0.76
LIMS3-203ENST00000480744 GCGP01275 180 aa10.3□□□□□ -0.76
LIMS3-203ENST00000480744 SEC11BP0C7V7 166 aa10.3□□□□□ -0.76
LIMS3-203ENST00000480744 ZNF80P51504 273 aaPredicted RBP10.3□□□□□ -0.76
LIMS3-203ENST00000480744 C9orf62Q8N4C0 152 aa10.3□□□□□ -0.76
LIMS3-203ENST00000480744 STOML3Q8TAV4 291 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms