RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 BUB1B-PAK6H3BSN5 160 aa8.17□□□□□ -1.1
SIK3-210ENST00000480468 FAM159AQ6UWV7 190 aa8.17□□□□□ -1.1
SIK3-210ENST00000480468 LYPD2Q6UXB3 125 aa8.17□□□□□ -1.1
SIK3-210ENST00000480468 C2orf66Q6UXQ4 117 aa8.17□□□□□ -1.1
SIK3-210ENST00000480468 TIMD4Q96H15 378 aa8.17□□□□□ -1.1
SIK3-210ENST00000480468 ODF3Q96PU9 254 aa8.17□□□□□ -1.1
SIK3-210ENST00000480468 SCGB2A1O75556 95 aa8.17□□□□□ -1.1
SIK3-210ENST00000480468 BRI3O95415 125 aa8.17□□□□□ -1.1
SIK3-210ENST00000480468 TMEM126AQ9H061 195 aa8.17□□□□□ -1.1
SIK3-210ENST00000480468 M0R381 172 aa8.16□□□□□ -1.1
SIK3-210ENST00000480468 ARL3P36405 182 aa8.16□□□□□ -1.1
SIK3-210ENST00000480468 ANXA2RQ3ZCQ2 193 aa8.16□□□□□ -1.1
SIK3-210ENST00000480468 SPANXN1Q5VSR9 72 aa8.16□□□□□ -1.1
SIK3-210ENST00000480468 SEM1Q6ZVN7 128 aa8.16□□□□□ -1.1
SIK3-210ENST00000480468 KLHL30-AS1Q8NEE0 82 aa8.16□□□□□ -1.1
SIK3-210ENST00000480468 MAFAQ8NHW3 353 aaPredicted RBP8.16□□□□□ -1.1
SIK3-210ENST00000480468 FANCD2OSQ96PS1 177 aa8.16□□□□□ -1.1
SIK3-210ENST00000480468 TRAV8-4A0A0B4J246 113 aa8.15□□□□□ -1.1
SIK3-210ENST00000480468 A0A0B4J2C4 111 aa8.15□□□□□ -1.1
SIK3-210ENST00000480468 IGHV1-69DA0A0B4J2H0 117 aa8.15□□□□□ -1.1
SIK3-210ENST00000480468 CLEC3BP05452 202 aa8.15□□□□□ -1.1
SIK3-210ENST00000480468 KLK15Q9H2R5 256 aa8.15□□□□□ -1.1
SIK3-210ENST00000480468 C21orf62Q9NYP8 219 aa8.15□□□□□ -1.1
SIK3-210ENST00000480468 DSPP15924 2871 aaKnown RBP8.15□□□□□ -1.1
SIK3-210ENST00000480468 PRAC2D3DTV9 90 aa8.15□□□□□ -1.1
SIK3-210ENST00000480468 IGHV3-33P01772 117 aa8.15□□□□□ -1.1
SIK3-210ENST00000480468 ATXN8Q156A1 80 aa8.15□□□□□ -1.1
SIK3-210ENST00000480468 IGFL4Q6B9Z1 124 aa8.15□□□□□ -1.1
SIK3-210ENST00000480468 C15orf53Q8NAA6 179 aa8.15□□□□□ -1.1
SIK3-210ENST00000480468 NTN5Q8WTR8 489 aaPredicted RBP8.15□□□□□ -1.1
SIK3-210ENST00000480468 HIF1ANQ9NWT6 349 aa8.15□□□□□ -1.1
SIK3-210ENST00000480468 PRRC2CQ9Y520 2896 aaKnown RBP8.15□□□□□ -1.11
SIK3-210ENST00000480468 IGLV4-69A0A075B6H9 119 aa8.14□□□□□ -1.11
SIK3-210ENST00000480468 C11orf86A6NJI1 115 aa8.14□□□□□ -1.11
SIK3-210ENST00000480468 PPP1R17O96001 155 aa8.14□□□□□ -1.11
SIK3-210ENST00000480468 ZNF883P0CG24 379 aa8.14□□□□□ -1.11
SIK3-210ENST00000480468 ATP1A1-AS1Q5TC04 95 aa8.14□□□□□ -1.11
SIK3-210ENST00000480468 C1orf122Q6ZSJ8 110 aa8.14□□□□□ -1.11
SIK3-210ENST00000480468 MRPL53Q96EL3 112 aaKnown RBP8.14□□□□□ -1.11
SIK3-210ENST00000480468 FAM240AA0A1B0GVK7 77 aa8.14□□□□□ -1.11
SIK3-210ENST00000480468 LY6LH3BQJ8 138 aa8.14□□□□□ -1.11
SIK3-210ENST00000480468 TGFAP01135 160 aa8.14□□□□□ -1.11
SIK3-210ENST00000480468 CRYGDP07320 174 aa8.14□□□□□ -1.11
SIK3-210ENST00000480468 CRIP2P52943 208 aaPredicted RBP8.14□□□□□ -1.11
SIK3-210ENST00000480468 LINC01620Q4KN68 170 aa8.14□□□□□ -1.11
SIK3-210ENST00000480468 MEIG1Q5JSS6 88 aa8.14□□□□□ -1.11
SIK3-210ENST00000480468 Q6ZQT7 251 aa8.14□□□□□ -1.11
SIK3-210ENST00000480468 Q6ZS46 218 aa8.14□□□□□ -1.11
SIK3-210ENST00000480468 TMEM263Q8WUH6 116 aaKnown RBP8.14□□□□□ -1.11
SIK3-210ENST00000480468 TRAV17A0A0B4J275 112 aa8.13□□□□□ -1.11
SIK3-210ENST00000480468 TRBV10-2A0A0K0K1G8 114 aa8.13□□□□□ -1.11
SIK3-210ENST00000480468 NBR2O15453 112 aa8.13□□□□□ -1.11
SIK3-210ENST00000480468 IGFL2Q6UWQ7 119 aa8.13□□□□□ -1.11
SIK3-210ENST00000480468 TRPT1Q86TN4 253 aaKnown RBP8.13□□□□□ -1.11
SIK3-210ENST00000480468 NPBQ8NG41 125 aa8.13□□□□□ -1.11
SIK3-210ENST00000480468 AMELXQ99217 191 aa8.13□□□□□ -1.11
SIK3-210ENST00000480468 AGPAT4-IT1Q9H0P7 198 aa8.13□□□□□ -1.11
SIK3-210ENST00000480468 RNF223E7ERA6 249 aa8.13□□□□□ -1.11
SIK3-210ENST00000480468 LGALS9O00182 355 aa8.13□□□□□ -1.11
SIK3-210ENST00000480468 ADIPOQQ15848 244 aa8.13□□□□□ -1.11
SIK3-210ENST00000480468 FAM57AQ8TBR7 257 aa8.13□□□□□ -1.11
SIK3-210ENST00000480468 DPH3P1Q9H4G8 78 aa8.13□□□□□ -1.11
SIK3-210ENST00000480468 S4R3C0 116 aa8.13□□□□□ -1.11
SIK3-210ENST00000480468 ZNF318Q5VUA4 2279 aa8.13□□□□□ -1.11
SIK3-210ENST00000480468 CELSR3Q9NYQ7 3312 aa8.12□□□□□ -1.11
SIK3-210ENST00000480468 TRAV2A0A0B4J234 112 aa8.12□□□□□ -1.11
SIK3-210ENST00000480468 CTSGP08311 255 aa8.12□□□□□ -1.11
SIK3-210ENST00000480468 LY6DQ14210 128 aa8.12□□□□□ -1.11
SIK3-210ENST00000480468 PMVKQ15126 192 aa8.12□□□□□ -1.11
SIK3-210ENST00000480468 CCL17Q92583 94 aa8.12□□□□□ -1.11
SIK3-210ENST00000480468 VPREB3Q9UKI3 123 aa8.12□□□□□ -1.11
SIK3-210ENST00000480468 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.11□□□□□ -1.11
SIK3-210ENST00000480468 TRBV7-7A0A0K0K1E9 115 aa8.11□□□□□ -1.11
SIK3-210ENST00000480468 A4D1N5 150 aa8.11□□□□□ -1.11
SIK3-210ENST00000480468 H3BMM0 161 aa8.11□□□□□ -1.11
SIK3-210ENST00000480468 TIMM23O14925 209 aa8.11□□□□□ -1.11
SIK3-210ENST00000480468 TSPEAR-AS2P59090 65 aa8.11□□□□□ -1.11
SIK3-210ENST00000480468 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.11□□□□□ -1.11
SIK3-210ENST00000480468 C9orf47Q6ZRZ4 202 aa8.11□□□□□ -1.11
SIK3-210ENST00000480468 UBE2WQ96B02 151 aa8.11□□□□□ -1.11
SIK3-210ENST00000480468 TMEM141Q96I45 108 aa8.11□□□□□ -1.11
SIK3-210ENST00000480468 SPANXDQ9BXN6 97 aa8.11□□□□□ -1.11
SIK3-210ENST00000480468 MSRB2Q9Y3D2 182 aa8.11□□□□□ -1.11
SIK3-210ENST00000480468 YAE1D1Q9NRH1 226 aa8.11□□□□□ -1.11
SIK3-210ENST00000480468 TRBV30A0A0K0K1B3 111 aa8.1□□□□□ -1.11
SIK3-210ENST00000480468 IGIPA6NJ69 53 aa8.1□□□□□ -1.11
SIK3-210ENST00000480468 J3QQQ9 107 aa8.1□□□□□ -1.11
SIK3-210ENST00000480468 EIF4EBP3O60516 100 aaPredicted RBP8.1□□□□□ -1.11
SIK3-210ENST00000480468 TSHBP01222 138 aa8.1□□□□□ -1.11
SIK3-210ENST00000480468 TEX49A0A1B0GTD5 131 aa8.1□□□□□ -1.11
SIK3-210ENST00000480468 BUB3O43684 328 aa8.1□□□□□ -1.11
SIK3-210ENST00000480468 DUSP14O95147 198 aaKnown RBP8.1□□□□□ -1.11
SIK3-210ENST00000480468 MED14OSP0DP75 135 aa8.1□□□□□ -1.11
SIK3-210ENST00000480468 DEFB121Q5J5C9 76 aa8.1□□□□□ -1.11
SIK3-210ENST00000480468 POM121L12Q8N7R1 296 aa8.1□□□□□ -1.11
SIK3-210ENST00000480468 RPL39LQ96EH5 51 aaKnown RBP8.1□□□□□ -1.11
SIK3-210ENST00000480468 LINC01587Q99440 93 aa8.1□□□□□ -1.11
SIK3-210ENST00000480468 TIMM17AQ99595 171 aa8.1□□□□□ -1.11
SIK3-210ENST00000480468 LENEPQ9Y5L5 61 aa8.1□□□□□ -1.11
SIK3-210ENST00000480468 H3BT86 120 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms