RNA–Protein interactions for RNA: ENST00000480340.1

DENND4B-208, Transcript of DENN domain containing 4B, human

TSL 2

Gene DENND4B, Length 2,530 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND4B-208	ENST00000480340	CD300E	Q496F6	205 aa	Predicted RBP	10.87	□□□□□ -0.67
DENND4B-208	ENST00000480340	SAMD5	Q5TGI4	173 aa		10.87	□□□□□ -0.67
DENND4B-208	ENST00000480340	PRSS3P2	Q8NHM4	247 aa		10.87	□□□□□ -0.67
DENND4B-208	ENST00000480340	TPPP3	Q9BW30	176 aa		10.87	□□□□□ -0.67
DENND4B-208	ENST00000480340	DNAJC9-AS1	A6NH13	148 aa		10.87	□□□□□ -0.67
DENND4B-208	ENST00000480340	IGHV3-23	P01764	117 aa		10.87	□□□□□ -0.67
DENND4B-208	ENST00000480340	CRIP1	P50238	77 aa		10.87	□□□□□ -0.67
DENND4B-208	ENST00000480340	FA2H	Q7L5A8	372 aa		10.87	□□□□□ -0.67
DENND4B-208	ENST00000480340	WFDC12	Q8WWY7	111 aa		10.87	□□□□□ -0.67
DENND4B-208	ENST00000480340	GAGE12H	A6NDE8	117 aa		10.86	□□□□□ -0.67
DENND4B-208	ENST00000480340	CRIP2	P52943	208 aa	Predicted RBP	10.86	□□□□□ -0.67
DENND4B-208	ENST00000480340	LYZ	P61626	148 aa		10.86	□□□□□ -0.67
DENND4B-208	ENST00000480340	C19orf54	Q5BKX5	351 aa		10.86	□□□□□ -0.67
DENND4B-208	ENST00000480340	ESM1	Q9NQ30	184 aa		10.86	□□□□□ -0.67
DENND4B-208	ENST00000480340	CUBN	O60494	3623 aa		10.86	□□□□□ -0.67
DENND4B-208	ENST00000480340	OTOR	Q9NRC9	128 aa		10.86	□□□□□ -0.67
DENND4B-208	ENST00000480340	TSSC4	Q9Y5U2	329 aa	Predicted RBP	10.86	□□□□□ -0.67
DENND4B-208	ENST00000480340	NF1	P21359	2839 aa		10.85	□□□□□ -0.67
DENND4B-208	ENST00000480340	CACNG7	P62955	275 aa		10.85	□□□□□ -0.67
DENND4B-208	ENST00000480340	LGALS9B	Q3B8N2	356 aa		10.85	□□□□□ -0.67
DENND4B-208	ENST00000480340	LGALS9C	Q6DKI2	356 aa		10.85	□□□□□ -0.67
DENND4B-208	ENST00000480340	SIGLEC8	Q9NYZ4	499 aa		10.85	□□□□□ -0.67
DENND4B-208	ENST00000480340	INAFM1	C9JVW0	142 aa		10.85	□□□□□ -0.67
DENND4B-208	ENST00000480340	SMIM13	P0DJ93	91 aa		10.85	□□□□□ -0.67
DENND4B-208	ENST00000480340	SCGB2A2	Q13296	93 aa		10.85	□□□□□ -0.67
DENND4B-208	ENST00000480340	PCP2	Q8IVA1	136 aa		10.85	□□□□□ -0.67
DENND4B-208	ENST00000480340	TMEM86B	Q8N661	226 aa		10.85	□□□□□ -0.67
DENND4B-208	ENST00000480340	NIPBL	Q6KC79	2804 aa	eCLIP	10.84	□□□□□ -0.67
DENND4B-208	ENST00000480340	TMEM213	A2RRL7	107 aa		10.84	□□□□□ -0.67
DENND4B-208	ENST00000480340		D6R8Y8	96 aa		10.84	□□□□□ -0.67
DENND4B-208	ENST00000480340	PPIF	P30405	207 aa	Known RBP	10.84	□□□□□ -0.67
DENND4B-208	ENST00000480340	C15orf32	Q32M92	178 aa		10.84	□□□□□ -0.67
DENND4B-208	ENST00000480340	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	10.84	□□□□□ -0.67
DENND4B-208	ENST00000480340	ZNF702P	Q9H963	129 aa		10.84	□□□□□ -0.67
DENND4B-208	ENST00000480340	HIGD1A	Q9Y241	93 aa		10.84	□□□□□ -0.67
DENND4B-208	ENST00000480340	NSD1	Q96L73	2696 aa	Predicted RBP	10.84	□□□□□ -0.67
DENND4B-208	ENST00000480340	RAB9A	P51151	201 aa		10.84	□□□□□ -0.67
DENND4B-208	ENST00000480340	RIG	Q13278	110 aa		10.84	□□□□□ -0.67
DENND4B-208	ENST00000480340	TM4SF20	Q53R12	229 aa		10.84	□□□□□ -0.67
DENND4B-208	ENST00000480340	GATD1	Q8NB37	220 aa		10.84	□□□□□ -0.67
DENND4B-208	ENST00000480340	FOXI2	Q6ZQN5	318 aa		10.83	□□□□□ -0.68
DENND4B-208	ENST00000480340	WFDC3	Q8IUB2	231 aa		10.83	□□□□□ -0.68
DENND4B-208	ENST00000480340	AMN1	Q8IY45	258 aa		10.83	□□□□□ -0.68
DENND4B-208	ENST00000480340	C8orf49	Q96NF6	230 aa		10.83	□□□□□ -0.68
DENND4B-208	ENST00000480340	VGLL1	Q99990	258 aa		10.83	□□□□□ -0.68
DENND4B-208	ENST00000480340	C21orf62	Q9NYP8	219 aa		10.83	□□□□□ -0.68
DENND4B-208	ENST00000480340	TMSB15B	A0A087X1C1	80 aa		10.83	□□□□□ -0.68
DENND4B-208	ENST00000480340	SERTM2	A0A1B0GWG4	89 aa		10.83	□□□□□ -0.68
DENND4B-208	ENST00000480340		J3QR89	54 aa		10.83	□□□□□ -0.68
DENND4B-208	ENST00000480340	ZNF207	O43670	478 aa	Known RBP	10.83	□□□□□ -0.68
DENND4B-208	ENST00000480340	TRGV3	P03979	118 aa		10.83	□□□□□ -0.68
DENND4B-208	ENST00000480340	FCGR2B	P31994	310 aa	Predicted RBP	10.83	□□□□□ -0.68
DENND4B-208	ENST00000480340	MFAP4	P55083	255 aa		10.83	□□□□□ -0.68
DENND4B-208	ENST00000480340	CKS1B	P61024	79 aa		10.83	□□□□□ -0.68
DENND4B-208	ENST00000480340	LCNL1	Q6ZST4	164 aa		10.83	□□□□□ -0.68
DENND4B-208	ENST00000480340	SPATA25	Q9BR10	227 aa		10.83	□□□□□ -0.68
DENND4B-208	ENST00000480340	FN1	P02751	2386 aa	Known RBP	10.82	□□□□□ -0.68
DENND4B-208	ENST00000480340	PF4V1	P10720	104 aa		10.82	□□□□□ -0.68
DENND4B-208	ENST00000480340	C10orf99	Q6UWK7	81 aa		10.82	□□□□□ -0.68
DENND4B-208	ENST00000480340		M0R3E3	92 aa		10.82	□□□□□ -0.68
DENND4B-208	ENST00000480340	ZNF418	Q8TF45	676 aa	Predicted RBP	10.82	□□□□□ -0.68
DENND4B-208	ENST00000480340	KLK15	Q9H2R5	256 aa		10.82	□□□□□ -0.68
DENND4B-208	ENST00000480340		F8W735	103 aa	Predicted RBP	10.81	□□□□□ -0.68
DENND4B-208	ENST00000480340	SMKR1	H3BMG3	65 aa		10.81	□□□□□ -0.68
DENND4B-208	ENST00000480340	PSG8	Q9UQ74	426 aa		10.81	□□□□□ -0.68
DENND4B-208	ENST00000480340	IGKV1-17	P01599	117 aa		10.81	□□□□□ -0.68
DENND4B-208	ENST00000480340	NMU	P48645	174 aa		10.81	□□□□□ -0.68
DENND4B-208	ENST00000480340	CFHR3	Q02985	330 aa		10.81	□□□□□ -0.68
DENND4B-208	ENST00000480340	KLK9	Q2XQG4	91 aa		10.81	□□□□□ -0.68
DENND4B-208	ENST00000480340	TTTY13	Q9BZ97	58 aa		10.81	□□□□□ -0.68
DENND4B-208	ENST00000480340	SPANXB1	Q9NS25	103 aa	Predicted RBP	10.81	□□□□□ -0.68
DENND4B-208	ENST00000480340	KLK9	Q9UKQ9	250 aa		10.81	□□□□□ -0.68
DENND4B-208	ENST00000480340	LYZL1	Q6UWQ5	148 aa		10.8	□□□□□ -0.68
DENND4B-208	ENST00000480340	SIGLEC15	Q6ZMC9	328 aa		10.8	□□□□□ -0.68
DENND4B-208	ENST00000480340	PRELID3A	Q96N28	172 aa		10.8	□□□□□ -0.68
DENND4B-208	ENST00000480340	TMEM14C	Q9P0S9	112 aa		10.8	□□□□□ -0.68
DENND4B-208	ENST00000480340	DKK2	Q9UBU2	259 aa		10.8	□□□□□ -0.68
DENND4B-208	ENST00000480340	TRBV19	A0A075B6N1	114 aa		10.8	□□□□□ -0.68
DENND4B-208	ENST00000480340	FBLL1	A6NHQ2	334 aa	Known RBP	10.8	□□□□□ -0.68
DENND4B-208	ENST00000480340	ATP5G2	Q06055	141 aa		10.8	□□□□□ -0.68
DENND4B-208	ENST00000480340	TCTEX1D4	Q5JR98	221 aa		10.8	□□□□□ -0.68
DENND4B-208	ENST00000480340	ZNF493	Q6ZR52	646 aa		10.8	□□□□□ -0.68
DENND4B-208	ENST00000480340	TMEM75	Q8N9X5	138 aa		10.8	□□□□□ -0.68
DENND4B-208	ENST00000480340	ZNF502	Q8TBZ5	544 aa		10.8	□□□□□ -0.68
DENND4B-208	ENST00000480340	C18orf15	Q96N68	181 aa		10.8	□□□□□ -0.68
DENND4B-208	ENST00000480340	TRAV26-1	A0A087WT03	109 aa		10.79	□□□□□ -0.68
DENND4B-208	ENST00000480340		F8W1H4	67 aa		10.79	□□□□□ -0.68
DENND4B-208	ENST00000480340	IGLV1-40	P01703	118 aa		10.79	□□□□□ -0.68
DENND4B-208	ENST00000480340	FXYD2	P54710	66 aa		10.79	□□□□□ -0.68
DENND4B-208	ENST00000480340	CLEC19A	Q6UXS0	136 aa		10.79	□□□□□ -0.68
DENND4B-208	ENST00000480340	EEF1AKMT3	Q96AZ1	226 aa		10.79	□□□□□ -0.68
DENND4B-208	ENST00000480340	ZNF580	Q9UK33	172 aa		10.79	□□□□□ -0.68
DENND4B-208	ENST00000480340	C2CD3	Q4AC94	2353 aa		10.79	□□□□□ -0.68
DENND4B-208	ENST00000480340	IGHV3-11	P01762	117 aa		10.79	□□□□□ -0.68
DENND4B-208	ENST00000480340	CLEC3B	P05452	202 aa		10.79	□□□□□ -0.68
DENND4B-208	ENST00000480340	GCSH	P23434	173 aa		10.79	□□□□□ -0.68
DENND4B-208	ENST00000480340	HILS1	P60008	231 aa		10.79	□□□□□ -0.68
DENND4B-208	ENST00000480340	WFDC2	Q14508	124 aa		10.79	□□□□□ -0.68
DENND4B-208	ENST00000480340	MRPL51	Q4U2R6	128 aa	Known RBP	10.79	□□□□□ -0.68
DENND4B-208	ENST00000480340		Q6ZSV7	163 aa		10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 142.4 ms