RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 ZNF415Q09FC8 603 aa10.92□□□□□ -0.66
C9orf3-217ENST00000479161 C15orf53Q8NAA6 179 aa10.92□□□□□ -0.66
C9orf3-217ENST00000479161 FMC1Q96HJ9 113 aa10.92□□□□□ -0.66
C9orf3-217ENST00000479161 SPXQ9BT56 116 aa10.92□□□□□ -0.66
C9orf3-217ENST00000479161 MANBALQ9NQG1 85 aa10.92□□□□□ -0.66
C9orf3-217ENST00000479161 H3BNG1 76 aa10.91□□□□□ -0.66
C9orf3-217ENST00000479161 PAGE4O60829 102 aa10.91□□□□□ -0.66
C9orf3-217ENST00000479161 TOR2AQ5JU69 321 aa10.91□□□□□ -0.66
C9orf3-217ENST00000479161 CST9LP1Q5W188 147 aa10.91□□□□□ -0.66
C9orf3-217ENST00000479161 Q6ZQT7 251 aa10.91□□□□□ -0.66
C9orf3-217ENST00000479161 EPPK1P58107 5090 aaKnown RBP10.91□□□□□ -0.66
C9orf3-217ENST00000479161 TMEM183BQ1AE95 376 aa10.9□□□□□ -0.66
C9orf3-217ENST00000479161 PRNTQ86SH4 94 aa10.9□□□□□ -0.66
C9orf3-217ENST00000479161 RASL10AQ92737 203 aa10.9□□□□□ -0.66
C9orf3-217ENST00000479161 GCGP01275 180 aa10.89□□□□□ -0.67
C9orf3-217ENST00000479161 P0DMU3 169 aa10.89□□□□□ -0.67
C9orf3-217ENST00000479161 FAM231AP0DMU4 169 aa10.89□□□□□ -0.67
C9orf3-217ENST00000479161 FAM231CP0DMU5 169 aa10.89□□□□□ -0.67
C9orf3-217ENST00000479161 TAGLN2P37802 199 aaKnown RBP10.89□□□□□ -0.67
C9orf3-217ENST00000479161 Q6ZTI0 123 aa10.89□□□□□ -0.67
C9orf3-217ENST00000479161 Q86TA4 180 aa10.89□□□□□ -0.67
C9orf3-217ENST00000479161 SGK494Q96LW2 274 aa10.89□□□□□ -0.67
C9orf3-217ENST00000479161 LINC00479Q96M42 142 aa10.89□□□□□ -0.67
C9orf3-217ENST00000479161 SDF2L1Q9HCN8 221 aa10.89□□□□□ -0.67
C9orf3-217ENST00000479161 KMT2AQ03164 3969 aa10.89□□□□□ -0.67
C9orf3-217ENST00000479161 GAGE12BA1L429 117 aa10.88□□□□□ -0.67
C9orf3-217ENST00000479161 FABP5P3A8MUU1 101 aa10.88□□□□□ -0.67
C9orf3-217ENST00000479161 GAGE7O76087 117 aa10.88□□□□□ -0.67
C9orf3-217ENST00000479161 LY6G6CO95867 125 aa10.88□□□□□ -0.67
C9orf3-217ENST00000479161 LTAP01374 205 aa10.88□□□□□ -0.67
C9orf3-217ENST00000479161 GAGE12FP0CL80 117 aa10.88□□□□□ -0.67
C9orf3-217ENST00000479161 GAGE12GP0CL81 117 aa10.88□□□□□ -0.67
C9orf3-217ENST00000479161 GAGE12IP0CL82 117 aa10.88□□□□□ -0.67
C9orf3-217ENST00000479161 ZNF80P51504 273 aaPredicted RBP10.88□□□□□ -0.67
C9orf3-217ENST00000479161 MUC21Q5SSG8 566 aa10.88□□□□□ -0.67
C9orf3-217ENST00000479161 PTH2Q96A98 100 aa10.88□□□□□ -0.67
C9orf3-217ENST00000479161 C8orf49Q96NF6 230 aa10.88□□□□□ -0.67
C9orf3-217ENST00000479161 TRAV34A0A0B4J273 112 aa10.87□□□□□ -0.67
C9orf3-217ENST00000479161 IGHV3-16A0A0C4DH30 117 aa10.87□□□□□ -0.67
C9orf3-217ENST00000479161 F5H768 121 aa10.87□□□□□ -0.67
C9orf3-217ENST00000479161 HTN3P15516 51 aa10.87□□□□□ -0.67
C9orf3-217ENST00000479161 UBE2G1P62253 170 aa10.87□□□□□ -0.67
C9orf3-217ENST00000479161 RNF212Q495C1 297 aa10.87□□□□□ -0.67
C9orf3-217ENST00000479161 TMEM88Q6PEY1 159 aa10.87□□□□□ -0.67
C9orf3-217ENST00000479161 TMEM183AQ8IXX5 376 aa10.87□□□□□ -0.67
C9orf3-217ENST00000479161 C11orf52Q96A22 123 aa10.87□□□□□ -0.67
C9orf3-217ENST00000479161 MDFICQ9P1T7 246 aa10.87□□□□□ -0.67
C9orf3-217ENST00000479161 BIRC6Q9NR09 4857 aa10.87□□□□□ -0.67
C9orf3-217ENST00000479161 HYDINQ4G0P3 5121 aa10.87□□□□□ -0.67
C9orf3-217ENST00000479161 TRGV2A0A075B6R0 118 aa10.86□□□□□ -0.67
C9orf3-217ENST00000479161 TRGV1A0A0A0MS02 117 aa10.86□□□□□ -0.67
C9orf3-217ENST00000479161 CCL20P78556 96 aa10.86□□□□□ -0.67
C9orf3-217ENST00000479161 SLAQ13239 276 aa10.86□□□□□ -0.67
C9orf3-217ENST00000479161 PIK3CD-AS1Q5SR53 167 aa10.86□□□□□ -0.67
C9orf3-217ENST00000479161 DNLZQ5SXM8 178 aa10.86□□□□□ -0.67
C9orf3-217ENST00000479161 DNAH6Q9C0G6 4158 aa10.86□□□□□ -0.67
C9orf3-217ENST00000479161 KRBOX1C9JBD0 128 aa10.85□□□□□ -0.67
C9orf3-217ENST00000479161 M0R2P5 195 aa10.85□□□□□ -0.67
C9orf3-217ENST00000479161 CIDEAO60543 219 aa10.85□□□□□ -0.67
C9orf3-217ENST00000479161 IFNA1P01562 189 aa10.85□□□□□ -0.67
C9orf3-217ENST00000479161 TYMSP04818 313 aa10.85□□□□□ -0.67
C9orf3-217ENST00000479161 AKR1C3P42330 323 aa10.85□□□□□ -0.67
C9orf3-217ENST00000479161 FAM3BP58499 235 aaPredicted RBP10.85□□□□□ -0.67
C9orf3-217ENST00000479161 BLOC1S1P78537 153 aa10.85□□□□□ -0.67
C9orf3-217ENST00000479161 ZNF674Q2M3X9 581 aa10.85□□□□□ -0.67
C9orf3-217ENST00000479161 LYPD6BQ8NI32 183 aa10.85□□□□□ -0.67
C9orf3-217ENST00000479161 MLST8Q9BVC4 326 aa10.85□□□□□ -0.67
C9orf3-217ENST00000479161 GNG13Q9P2W3 67 aa10.85□□□□□ -0.67
C9orf3-217ENST00000479161 C11orf21Q9P2W6 132 aa10.85□□□□□ -0.67
C9orf3-217ENST00000479161 GNRH2O43555 120 aa10.84□□□□□ -0.67
C9orf3-217ENST00000479161 PDE6DO43924 150 aa10.84□□□□□ -0.67
C9orf3-217ENST00000479161 POM121L12Q8N7R1 296 aa10.84□□□□□ -0.67
C9orf3-217ENST00000479161 NAGKQ9UJ70 344 aa10.84□□□□□ -0.67
C9orf3-217ENST00000479161 A0A1B0GV50 99 aa10.83□□□□□ -0.68
C9orf3-217ENST00000479161 NDUFS6O75380 124 aaKnown RBP10.83□□□□□ -0.68
C9orf3-217ENST00000479161 HOXA5P20719 270 aa10.83□□□□□ -0.68
C9orf3-217ENST00000479161 CRIP1P50238 77 aa10.83□□□□□ -0.68
C9orf3-217ENST00000479161 MEF2BQ02080 365 aaPredicted RBP10.83□□□□□ -0.68
C9orf3-217ENST00000479161 FAM162BQ5T6X4 162 aa10.83□□□□□ -0.68
C9orf3-217ENST00000479161 SMIM12Q96EX1 92 aa10.83□□□□□ -0.68
C9orf3-217ENST00000479161 ZC2HC1AQ96GY0 325 aa10.83□□□□□ -0.68
C9orf3-217ENST00000479161 C9orf85Q96MD7 179 aa10.83□□□□□ -0.68
C9orf3-217ENST00000479161 IGKV3D-20A0A0C4DH25 116 aa10.82□□□□□ -0.68
C9orf3-217ENST00000479161 SCO2A0A1W2PP80 73 aa10.82□□□□□ -0.68
C9orf3-217ENST00000479161 ALKAL2Q6UX46 152 aa10.82□□□□□ -0.68
C9orf3-217ENST00000479161 VAX2Q9UIW0 290 aa10.82□□□□□ -0.68
C9orf3-217ENST00000479161 NACAE9PAV3 2078 aa10.81□□□□□ -0.68
C9orf3-217ENST00000479161 TRAV4A0A0B4J268 109 aa10.81□□□□□ -0.68
C9orf3-217ENST00000479161 BCL2P10415 239 aa10.81□□□□□ -0.68
C9orf3-217ENST00000479161 OR5I1Q13606 314 aa10.81□□□□□ -0.68
C9orf3-217ENST00000479161 LINC01559Q495D7 138 aa10.81□□□□□ -0.68
C9orf3-217ENST00000479161 MRPL16Q9NX20 251 aaKnown RBP10.81□□□□□ -0.68
C9orf3-217ENST00000479161 IL36BQ9NZH7 164 aa10.81□□□□□ -0.68
C9orf3-217ENST00000479161 PRO0255Q9UI72 69 aa10.81□□□□□ -0.68
C9orf3-217ENST00000479161 TRAV26-1A0A087WT03 109 aa10.8□□□□□ -0.68
C9orf3-217ENST00000479161 CXCL1P09341 107 aa10.8□□□□□ -0.68
C9orf3-217ENST00000479161 RNASE3P12724 160 aaKnown RBP10.8□□□□□ -0.68
C9orf3-217ENST00000479161 RPL35P42766 123 aaKnown RBP10.8□□□□□ -0.68
C9orf3-217ENST00000479161 BAGE2Q86Y30 109 aa10.8□□□□□ -0.68
C9orf3-217ENST00000479161 SH2D1AO60880 128 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms