RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 PRSS33Q8NF86 280 aa3.28□□□□□ -1.88
GPNMB-210ENST00000478451 OR8A1Q8NGG7 326 aa3.28□□□□□ -1.88
GPNMB-210ENST00000478451 RNASE8Q8TDE3 154 aaKnown RBP3.28□□□□□ -1.88
GPNMB-210ENST00000478451 IFI27L1Q96BM0 104 aa3.28□□□□□ -1.88
GPNMB-210ENST00000478451 ASCL2Q99929 193 aa3.28□□□□□ -1.88
GPNMB-210ENST00000478451 SIGLEC8Q9NYZ4 499 aa3.28□□□□□ -1.88
GPNMB-210ENST00000478451 HIGD1BQ9P298 99 aa3.28□□□□□ -1.88
GPNMB-210ENST00000478451 VPS13AQ96RL7 3174 aa3.28□□□□□ -1.88
GPNMB-210ENST00000478451 PLXNB1O43157 2135 aa3.28□□□□□ -1.89
GPNMB-210ENST00000478451 LOC105371242A0A075B767 164 aa3.27□□□□□ -1.89
GPNMB-210ENST00000478451 A0A087X0K7 114 aa3.27□□□□□ -1.89
GPNMB-210ENST00000478451 IGLV9-49A0A0B4J1Y8 123 aa3.27□□□□□ -1.89
GPNMB-210ENST00000478451 LINC01546A6NGU7 62 aa3.27□□□□□ -1.89
GPNMB-210ENST00000478451 OR2T8A6NH00 312 aa3.27□□□□□ -1.89
GPNMB-210ENST00000478451 LINC01549A6NIU2 74 aa3.27□□□□□ -1.89
GPNMB-210ENST00000478451 ODF3BA8MYP8 253 aa3.27□□□□□ -1.89
GPNMB-210ENST00000478451 K7EMI3 77 aa3.27□□□□□ -1.89
GPNMB-210ENST00000478451 ZNF207O43670 478 aaKnown RBP3.27□□□□□ -1.89
GPNMB-210ENST00000478451 CIDEAO60543 219 aa3.27□□□□□ -1.89
GPNMB-210ENST00000478451 IGLC6P0CF74 106 aa3.27□□□□□ -1.89
GPNMB-210ENST00000478451 SMIM13P0DJ93 91 aa3.27□□□□□ -1.89
GPNMB-210ENST00000478451 FABP2P12104 132 aa3.27□□□□□ -1.89
GPNMB-210ENST00000478451 PRTN3P24158 256 aa3.27□□□□□ -1.89
GPNMB-210ENST00000478451 FCER1GP30273 86 aa3.27□□□□□ -1.89
GPNMB-210ENST00000478451 IFI27P40305 119 aaPredicted RBP3.27□□□□□ -1.89
GPNMB-210ENST00000478451 ZNF138P52744 262 aa3.27□□□□□ -1.89
GPNMB-210ENST00000478451 RBX1P62877 108 aa3.27□□□□□ -1.89
GPNMB-210ENST00000478451 CACNG7P62955 275 aa3.27□□□□□ -1.89
GPNMB-210ENST00000478451 MRPL51Q4U2R6 128 aaKnown RBP3.27□□□□□ -1.89
GPNMB-210ENST00000478451 OCIAD2Q56VL3 154 aa3.27□□□□□ -1.89
GPNMB-210ENST00000478451 TMEM78Q5T7P6 136 aa3.27□□□□□ -1.89
GPNMB-210ENST00000478451 AMMECR1LQ6DCA0 310 aa3.27□□□□□ -1.89
GPNMB-210ENST00000478451 LINC00173Q6ZV60 143 aa3.27□□□□□ -1.89
GPNMB-210ENST00000478451 IL17RELQ6ZVW7 336 aa3.27□□□□□ -1.89
GPNMB-210ENST00000478451 MRPL53Q96EL3 112 aaKnown RBP3.27□□□□□ -1.89
GPNMB-210ENST00000478451 CNFNQ9BYD5 112 aa3.27□□□□□ -1.89
GPNMB-210ENST00000478451 CST9LQ9H4G1 147 aa3.27□□□□□ -1.89
GPNMB-210ENST00000478451 SH3BGRL2Q9UJC5 107 aa3.27□□□□□ -1.89
GPNMB-210ENST00000478451 TMSB15BA0A087X1C1 80 aa3.26□□□□□ -1.89
GPNMB-210ENST00000478451 TRBV7-1A0A0A6YYK4 115 aa3.26□□□□□ -1.89
GPNMB-210ENST00000478451 A0A0G2JLM5 398 aa3.26□□□□□ -1.89
GPNMB-210ENST00000478451 LOC389332A0A1B0GUA5 103 aa3.26□□□□□ -1.89
GPNMB-210ENST00000478451 NCBP2LA6PVI3 153 aaKnown RBP3.26□□□□□ -1.89
GPNMB-210ENST00000478451 J3QR89 54 aa3.26□□□□□ -1.89
GPNMB-210ENST00000478451 K7EP34 96 aa3.26□□□□□ -1.89
GPNMB-210ENST00000478451 M0R3E3 92 aa3.26□□□□□ -1.89
GPNMB-210ENST00000478451 CCL24O00175 119 aa3.26□□□□□ -1.89
GPNMB-210ENST00000478451 DPM2O94777 84 aa3.26□□□□□ -1.89
GPNMB-210ENST00000478451 PPP1R17O96001 155 aa3.26□□□□□ -1.89
GPNMB-210ENST00000478451 IGKCP01834 107 aa3.26□□□□□ -1.89
GPNMB-210ENST00000478451 ORM1P02763 201 aa3.26□□□□□ -1.89
GPNMB-210ENST00000478451 SMIM17P0DL12 118 aa3.26□□□□□ -1.89
GPNMB-210ENST00000478451 IGHV4-38-2P0DP08 117 aa3.26□□□□□ -1.89
GPNMB-210ENST00000478451 SLC25A16P16260 332 aa3.26□□□□□ -1.89
GPNMB-210ENST00000478451 COL8A2P25067 703 aa3.26□□□□□ -1.89
GPNMB-210ENST00000478451 PLNP26678 52 aa3.26□□□□□ -1.89
GPNMB-210ENST00000478451 NMUP48645 174 aa3.26□□□□□ -1.89
GPNMB-210ENST00000478451 UCNP55089 124 aa3.26□□□□□ -1.89
GPNMB-210ENST00000478451 EBI3Q14213 229 aa3.26□□□□□ -1.89
GPNMB-210ENST00000478451 TAL2Q16559 108 aa3.26□□□□□ -1.89
GPNMB-210ENST00000478451 LDLRAD2Q5SZI1 272 aa3.26□□□□□ -1.89
GPNMB-210ENST00000478451 C2orf91Q6ZV80 131 aa3.26□□□□□ -1.89
GPNMB-210ENST00000478451 ERASQ7Z444 233 aa3.26□□□□□ -1.89
GPNMB-210ENST00000478451 AMN1Q8IY45 258 aa3.26□□□□□ -1.89
GPNMB-210ENST00000478451 Q8N8P6 123 aa3.26□□□□□ -1.89
GPNMB-210ENST00000478451 OR2K2Q8NGT1 345 aa3.26□□□□□ -1.89
GPNMB-210ENST00000478451 MYOZ3Q8TDC0 251 aa3.26□□□□□ -1.89
GPNMB-210ENST00000478451 EEF1AKMT3Q96AZ1 226 aa3.26□□□□□ -1.89
GPNMB-210ENST00000478451 HILPDAQ9Y5L2 63 aa3.26□□□□□ -1.89
GPNMB-210ENST00000478451 LENEPQ9Y5L5 61 aa3.26□□□□□ -1.89
GPNMB-210ENST00000478451 ZNF318Q5VUA4 2279 aa3.26□□□□□ -1.89
GPNMB-210ENST00000478451 DMDP11532 3685 aa3.25□□□□□ -1.89
GPNMB-210ENST00000478451 OTOGLQ3ZCN5 2332 aa3.25□□□□□ -1.89
GPNMB-210ENST00000478451 IGKV2-40A0A087WW87 121 aaPredicted RBP3.25□□□□□ -1.89
GPNMB-210ENST00000478451 A0A1W2PPM0 123 aa3.25□□□□□ -1.89
GPNMB-210ENST00000478451 TMEM213A2RRL7 107 aa3.25□□□□□ -1.89
GPNMB-210ENST00000478451 NPYP01303 97 aa3.25□□□□□ -1.89
GPNMB-210ENST00000478451 IGKV2D-40P01614 121 aaPredicted RBP3.25□□□□□ -1.89
GPNMB-210ENST00000478451 FGF6P10767 208 aa3.25□□□□□ -1.89
GPNMB-210ENST00000478451 EVI2AP22794 236 aa3.25□□□□□ -1.89
GPNMB-210ENST00000478451 CD24P25063 80 aa3.25□□□□□ -1.89
GPNMB-210ENST00000478451 LEPP41159 167 aa3.25□□□□□ -1.89
GPNMB-210ENST00000478451 UQCRFS1P47985 274 aa3.25□□□□□ -1.89
GPNMB-210ENST00000478451 CRIP1P50238 77 aa3.25□□□□□ -1.89
GPNMB-210ENST00000478451 LAGE3Q14657 143 aa3.25□□□□□ -1.89
GPNMB-210ENST00000478451 KLK9Q2XQG4 91 aa3.25□□□□□ -1.89
GPNMB-210ENST00000478451 ZNF876PQ49A33 203 aa3.25□□□□□ -1.89
GPNMB-210ENST00000478451 ORMDL2Q53FV1 153 aa3.25□□□□□ -1.89
GPNMB-210ENST00000478451 VMO1Q7Z5L0 202 aa3.25□□□□□ -1.89
GPNMB-210ENST00000478451 LHFPL4Q7Z7J7 247 aa3.25□□□□□ -1.89
GPNMB-210ENST00000478451 Q8N6K4 173 aa3.25□□□□□ -1.89
GPNMB-210ENST00000478451 MRAP2Q96G30 205 aa3.25□□□□□ -1.89
GPNMB-210ENST00000478451 METTL26Q96S19 204 aa3.25□□□□□ -1.89
GPNMB-210ENST00000478451 KLK9Q9UKQ9 250 aa3.25□□□□□ -1.89
GPNMB-210ENST00000478451 RP1L1Q8IWN7 2480 aaPredicted RBP3.24□□□□□ -1.89
GPNMB-210ENST00000478451 A0A096LNJ9 63 aa3.24□□□□□ -1.89
GPNMB-210ENST00000478451 TRAV12-1A0A0B4J245 112 aa3.24□□□□□ -1.89
GPNMB-210ENST00000478451 TRAV8-6A0A0B4J262 113 aa3.24□□□□□ -1.89
GPNMB-210ENST00000478451 IGHV4-61A0A0C4DH41 118 aa3.24□□□□□ -1.89
GPNMB-210ENST00000478451 FAM223BA6NKX1 122 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms