RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 FABP4P15090 132 aa-1.32□□□□□ -2.62
CALD1-218ENST00000478075 UBE2KP61086 200 aa-1.32□□□□□ -2.62
CALD1-218ENST00000478075 RANP62826 216 aaKnown RBP-1.32□□□□□ -2.62
CALD1-218ENST00000478075 BEX3Q00994 111 aa-1.32□□□□□ -2.62
CALD1-218ENST00000478075 TMED1Q13445 227 aa-1.32□□□□□ -2.62
CALD1-218ENST00000478075 COQ5Q5HYK3 327 aa-1.32□□□□□ -2.62
CALD1-218ENST00000478075 TNFAIP8L2Q6P589 184 aaPredicted RBP-1.32□□□□□ -2.62
CALD1-218ENST00000478075 FAM151BQ6UXP7 276 aa-1.32□□□□□ -2.62
CALD1-218ENST00000478075 ZNF818PQ6ZRF7 136 aa-1.32□□□□□ -2.62
CALD1-218ENST00000478075 RUFY3Q7L099 469 aa-1.32□□□□□ -2.62
CALD1-218ENST00000478075 PQLC3Q8N755 202 aa-1.32□□□□□ -2.62
CALD1-218ENST00000478075 JOSD2Q8TAC2 188 aa-1.32□□□□□ -2.62
CALD1-218ENST00000478075 PIGXQ8TBF5 258 aa-1.32□□□□□ -2.62
CALD1-218ENST00000478075 STAG3L4Q8TBR4 150 aa-1.32□□□□□ -2.62
CALD1-218ENST00000478075 EEF1AKMT1Q8WVE0 214 aa-1.32□□□□□ -2.62
CALD1-218ENST00000478075 TOMM6Q96B49 74 aa-1.32□□□□□ -2.62
CALD1-218ENST00000478075 PBDC1Q9BVG4 233 aa-1.32□□□□□ -2.62
CALD1-218ENST00000478075 TIPINQ9BVW5 301 aa-1.32□□□□□ -2.62
CALD1-218ENST00000478075 NPCDR1Q9BY65 106 aa-1.32□□□□□ -2.62
CALD1-218ENST00000478075 EXO5Q9H790 373 aa-1.32□□□□□ -2.62
CALD1-218ENST00000478075 STMN3Q9NZ72 180 aa-1.32□□□□□ -2.62
CALD1-218ENST00000478075 COMMD9Q9P000 198 aa-1.32□□□□□ -2.62
CALD1-218ENST00000478075 EXTL2Q9UBQ6 330 aa-1.32□□□□□ -2.62
CALD1-218ENST00000478075 DKKL1Q9UK85 242 aa-1.32□□□□□ -2.62
CALD1-218ENST00000478075 PIN4Q9Y237 131 aaKnown RBP-1.32□□□□□ -2.62
CALD1-218ENST00000478075 CYSLTR1Q9Y271 337 aa-1.32□□□□□ -2.62
CALD1-218ENST00000478075 NDUFAF1Q9Y375 327 aa-1.32□□□□□ -2.62
CALD1-218ENST00000478075 PTPRMP28827 1452 aa-1.32□□□□□ -2.62
CALD1-218ENST00000478075 NEO1Q92859 1461 aa-1.32□□□□□ -2.62
CALD1-218ENST00000478075 MBD5Q9P267 1494 aa-1.32□□□□□ -2.62
CALD1-218ENST00000478075 NCOA3Q9Y6Q9 1424 aa-1.32□□□□□ -2.62
CALD1-218ENST00000478075 IBTKQ9P2D0 1353 aaPredicted RBP-1.33□□□□□ -2.62
CALD1-218ENST00000478075 N4BP2Q86UW6 1770 aaPredicted RBP-1.33□□□□□ -2.62
CALD1-218ENST00000478075 CXorf51AA0A1B0GTR3 108 aa-1.33□□□□□ -2.62
CALD1-218ENST00000478075 DISC1C4P0D8 188 aa-1.33□□□□□ -2.62
CALD1-218ENST00000478075 I3L3M4 83 aa-1.33□□□□□ -2.62
CALD1-218ENST00000478075 K7ERJ3 54 aa-1.33□□□□□ -2.62
CALD1-218ENST00000478075 KPNA4O00629 521 aaPredicted RBP-1.33□□□□□ -2.62
CALD1-218ENST00000478075 FABP7O15540 132 aa-1.33□□□□□ -2.62
CALD1-218ENST00000478075 RNF13O43567 381 aa-1.33□□□□□ -2.62
CALD1-218ENST00000478075 EDF1O60869 148 aaKnown RBP-1.33□□□□□ -2.62
CALD1-218ENST00000478075 RPS17P08708 135 aaKnown RBP-1.33□□□□□ -2.62
CALD1-218ENST00000478075 SMIM6P0DI80 62 aa-1.33□□□□□ -2.62
CALD1-218ENST00000478075 SAA1P0DJI8 122 aaPredicted RBP-1.33□□□□□ -2.62
CALD1-218ENST00000478075 PIPP12273 146 aaPredicted RBP-1.33□□□□□ -2.62
CALD1-218ENST00000478075 HLA-EP13747 358 aa-1.33□□□□□ -2.62
CALD1-218ENST00000478075 SRP14P37108 136 aaKnown RBP-1.33□□□□□ -2.62
CALD1-218ENST00000478075 POLR2JP52435 117 aaKnown RBP-1.33□□□□□ -2.62
CALD1-218ENST00000478075 DNAJB13P59910 316 aa-1.33□□□□□ -2.62
CALD1-218ENST00000478075 UBE2HP62256 183 aa-1.33□□□□□ -2.62
CALD1-218ENST00000478075 LCN2P80188 198 aa-1.33□□□□□ -2.62
CALD1-218ENST00000478075 HIST3H3Q16695 136 aa-1.33□□□□□ -2.62
CALD1-218ENST00000478075 C9orf116Q5BN46 136 aaPredicted RBP-1.33□□□□□ -2.62
CALD1-218ENST00000478075 EIF5AL1Q6IS14 154 aaKnown RBP-1.33□□□□□ -2.62
CALD1-218ENST00000478075 ARL6IP6Q8N6S5 226 aa-1.33□□□□□ -2.62
CALD1-218ENST00000478075 LRRC20Q8TCA0 184 aa-1.33□□□□□ -2.62
CALD1-218ENST00000478075 FAM172AQ8WUF8 416 aa-1.33□□□□□ -2.62
CALD1-218ENST00000478075 PP6455Q8WZ26 134 aa-1.33□□□□□ -2.62
CALD1-218ENST00000478075 CLEC2BQ92478 149 aa-1.33□□□□□ -2.62
CALD1-218ENST00000478075 IFI27L1Q96BM0 104 aa-1.33□□□□□ -2.62
CALD1-218ENST00000478075 CIB1Q99828 191 aa-1.33□□□□□ -2.62
CALD1-218ENST00000478075 DCUN1D5Q9BTE7 237 aa-1.33□□□□□ -2.62
CALD1-218ENST00000478075 TMBIM4Q9HC24 238 aa-1.33□□□□□ -2.62
CALD1-218ENST00000478075 LZTFL1Q9NQ48 299 aa-1.33□□□□□ -2.62
CALD1-218ENST00000478075 NDUFA4L2Q9NRX3 87 aa-1.33□□□□□ -2.62
CALD1-218ENST00000478075 C19orf12Q9NSK7 152 aa-1.33□□□□□ -2.62
CALD1-218ENST00000478075 TAS2R3Q9NYW6 316 aa-1.33□□□□□ -2.62
CALD1-218ENST00000478075 VPS29Q9UBQ0 182 aa-1.33□□□□□ -2.62
CALD1-218ENST00000478075 ODF2LQ9ULJ1 636 aa-1.33□□□□□ -2.62
CALD1-218ENST00000478075 SBDSQ9Y3A5 250 aaKnown RBP eCLIP-1.33□□□□□ -2.62
CALD1-218ENST00000478075 DMDP11532 3685 aa-1.33□□□□□ -2.62
CALD1-218ENST00000478075 PTPRGP23470 1445 aa-1.33□□□□□ -2.62
CALD1-218ENST00000478075 WRNQ14191 1432 aaPredicted RBP eCLIP-1.33□□□□□ -2.62
CALD1-218ENST00000478075 TRAPPC8Q9Y2L5 1435 aa-1.33□□□□□ -2.62
CALD1-218ENST00000478075 PARP14Q460N5 1801 aa-1.33□□□□□ -2.62
CALD1-218ENST00000478075 TMEM94Q12767 1356 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 SCN11AQ9UI33 1791 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 WDFY4Q6ZS81 3184 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 ABCC9O60706 1549 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 PRDM15P57071 1507 aaPredicted RBP-1.34□□□□□ -2.62
CALD1-218ENST00000478075 TIAM2Q8IVF5 1701 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 LINC01546A6NGU7 62 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 CLDN24A6NM45 220 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 CENPXA8MT69 81 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 F5H5K5 113 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 TMEM256-PLSCR3K7ERE1 68 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 M0R135 149 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 CYBAP13498 195 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 ADCYAP1P18509 176 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 S100A5P33763 92 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 DYNLT3P51808 116 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 RGS8P57771 180 aaPredicted RBP-1.34□□□□□ -2.62
CALD1-218ENST00000478075 RAB5BP61020 215 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 CXCR4P61073 352 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 BTG2P78543 158 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 MLLT11Q13015 90 aaPredicted RBP-1.34□□□□□ -2.62
CALD1-218ENST00000478075 OR8B8Q15620 311 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 BEX5Q5H9J7 111 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 TMEM170BQ5T4T1 132 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 SSX6Q7RTT6 188 aa-1.34□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms