RNA–Protein interactions for RNA: ENST00000477794.2

PRKCD-204, Transcript of protein kinase C delta, human

TSL 3

Gene PRKCD, Length 404 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCD-204	ENST00000477794	IGHV3-38	A0A0C4DH36	116 aa		12.57	□□□□□ -0.4
PRKCD-204	ENST00000477794	TIRAP	P58753	221 aa		12.57	□□□□□ -0.4
PRKCD-204	ENST00000477794	TMEM183B	Q1AE95	376 aa		12.57	□□□□□ -0.4
PRKCD-204	ENST00000477794	TMEM183A	Q8IXX5	376 aa		12.57	□□□□□ -0.4
PRKCD-204	ENST00000477794	NHLRC2	Q8NBF2	726 aa		12.57	□□□□□ -0.4
PRKCD-204	ENST00000477794	MDFIC	Q9P1T7	246 aa		12.57	□□□□□ -0.4
PRKCD-204	ENST00000477794	TRAV8-6	A0A0B4J262	113 aa		12.56	□□□□□ -0.4
PRKCD-204	ENST00000477794	OR7C2	O60412	319 aa		12.56	□□□□□ -0.4
PRKCD-204	ENST00000477794	GCSAML	Q5JQS6	135 aa		12.56	□□□□□ -0.4
PRKCD-204	ENST00000477794	MIR17HG	Q75NE6	70 aa		12.56	□□□□□ -0.4
PRKCD-204	ENST00000477794	FXYD6-FXYD2	A0A087WZ82	144 aa		12.55	□□□□□ -0.4
PRKCD-204	ENST00000477794	C17orf112	F2Z3M2	114 aa		12.55	□□□□□ -0.4
PRKCD-204	ENST00000477794	SMLR1	H3BR10	107 aa		12.55	□□□□□ -0.4
PRKCD-204	ENST00000477794	OR10J4	P0C629	311 aa		12.55	□□□□□ -0.4
PRKCD-204	ENST00000477794		Q6AWC8	147 aa		12.55	□□□□□ -0.4
PRKCD-204	ENST00000477794	INO80E	Q8NBZ0	244 aa	Predicted RBP	12.55	□□□□□ -0.4
PRKCD-204	ENST00000477794	FAM167A-AS1	Q96KT0	104 aa		12.55	□□□□□ -0.4
PRKCD-204	ENST00000477794	ATP5S	Q99766	215 aa		12.55	□□□□□ -0.4
PRKCD-204	ENST00000477794	MBD2	Q9UBB5	411 aa		12.55	□□□□□ -0.4
PRKCD-204	ENST00000477794	HMSD	A8MTL9	139 aa		12.54	□□□□□ -0.4
PRKCD-204	ENST00000477794		M0R2P5	195 aa		12.54	□□□□□ -0.4
PRKCD-204	ENST00000477794	PFN1	P07737	140 aa	Known RBP	12.54	□□□□□ -0.4
PRKCD-204	ENST00000477794	RAN	P62826	216 aa	Known RBP	12.54	□□□□□ -0.4
PRKCD-204	ENST00000477794		Q5BKY6	102 aa		12.54	□□□□□ -0.4
PRKCD-204	ENST00000477794	LINC01556	Q5JQF7	62 aa		12.54	□□□□□ -0.4
PRKCD-204	ENST00000477794		Q6ZQT7	251 aa		12.54	□□□□□ -0.4
PRKCD-204	ENST00000477794	FXYD5	Q96DB9	178 aa		12.54	□□□□□ -0.4
PRKCD-204	ENST00000477794	NAGK	Q9UJ70	344 aa		12.54	□□□□□ -0.4
PRKCD-204	ENST00000477794		G3V3Q6	166 aa		12.53	□□□□□ -0.4
PRKCD-204	ENST00000477794	PLA2G1B	P04054	148 aa	Known RBP	12.53	□□□□□ -0.4
PRKCD-204	ENST00000477794	UBE2L3	P68036	154 aa	Known RBP	12.53	□□□□□ -0.4
PRKCD-204	ENST00000477794	TDRG1	Q3Y452	100 aa		12.53	□□□□□ -0.4
PRKCD-204	ENST00000477794	OR5C1	Q8NGR4	320 aa		12.53	□□□□□ -0.4
PRKCD-204	ENST00000477794	TMED6	Q8WW62	240 aa		12.53	□□□□□ -0.4
PRKCD-204	ENST00000477794	PHYHIPL	Q96FC7	376 aa		12.53	□□□□□ -0.4
PRKCD-204	ENST00000477794	OR5AC2	Q9NZP5	309 aa		12.53	□□□□□ -0.4
PRKCD-204	ENST00000477794		H0YIZ8	118 aa		12.52	□□□□□ -0.41
PRKCD-204	ENST00000477794	TAS2R45	P59539	299 aa		12.52	□□□□□ -0.41
PRKCD-204	ENST00000477794	FAM74A1	Q5RGS3	127 aa		12.52	□□□□□ -0.41
PRKCD-204	ENST00000477794	SH3BGRL3	Q9H299	93 aa		12.52	□□□□□ -0.41
PRKCD-204	ENST00000477794	VPS13B	Q7Z7G8	4022 aa		12.51	□□□□□ -0.41
PRKCD-204	ENST00000477794	IBA57-AS1	B1ANH7	110 aa		12.51	□□□□□ -0.41
PRKCD-204	ENST00000477794	ARPC5	O15511	151 aa		12.51	□□□□□ -0.41
PRKCD-204	ENST00000477794	CIDEA	O60543	219 aa		12.51	□□□□□ -0.41
PRKCD-204	ENST00000477794	OR10J3	Q5JRS4	329 aa		12.51	□□□□□ -0.41
PRKCD-204	ENST00000477794		Q8N814	137 aa		12.51	□□□□□ -0.41
PRKCD-204	ENST00000477794	OR11H4	Q8NGC9	324 aa		12.51	□□□□□ -0.41
PRKCD-204	ENST00000477794	CMTM2	Q8TAZ6	248 aa		12.51	□□□□□ -0.41
PRKCD-204	ENST00000477794	KCNS1	Q96KK3	526 aa		12.51	□□□□□ -0.41
PRKCD-204	ENST00000477794	PRADC1	Q9BSG0	188 aa		12.51	□□□□□ -0.41
PRKCD-204	ENST00000477794	TM2D2	Q9BX73	214 aa		12.51	□□□□□ -0.41
PRKCD-204	ENST00000477794	TNFSF18	Q9UNG2	199 aa		12.51	□□□□□ -0.41
PRKCD-204	ENST00000477794	LRCOL1	A6NCL2	159 aa		12.5	□□□□□ -0.41
PRKCD-204	ENST00000477794	HAMP	P81172	84 aa		12.5	□□□□□ -0.41
PRKCD-204	ENST00000477794	KHDC3L	Q587J8	217 aa		12.5	□□□□□ -0.41
PRKCD-204	ENST00000477794	AQP10	Q96PS8	301 aa		12.5	□□□□□ -0.41
PRKCD-204	ENST00000477794		Q9HAA7	133 aa		12.5	□□□□□ -0.41
PRKCD-204	ENST00000477794	SDF2L1	Q9HCN8	221 aa		12.5	□□□□□ -0.41
PRKCD-204	ENST00000477794	TRAV21	A0A0B4J279	112 aa		12.49	□□□□□ -0.41
PRKCD-204	ENST00000477794		A0A0D9SG52	128 aa		12.49	□□□□□ -0.41
PRKCD-204	ENST00000477794	FBLL1	A6NHQ2	334 aa	Known RBP	12.49	□□□□□ -0.41
PRKCD-204	ENST00000477794	DIRC3	C9JPN6	131 aa		12.49	□□□□□ -0.41
PRKCD-204	ENST00000477794	RPL12	P30050	165 aa	Known RBP	12.49	□□□□□ -0.41
PRKCD-204	ENST00000477794	NHLH2	Q02577	135 aa		12.49	□□□□□ -0.41
PRKCD-204	ENST00000477794	ZNF345	Q14585	488 aa		12.49	□□□□□ -0.41
PRKCD-204	ENST00000477794	GATA1	P15976	413 aa	Predicted RBP	12.48	□□□□□ -0.41
PRKCD-204	ENST00000477794	LAGE3	Q14657	143 aa		12.48	□□□□□ -0.41
PRKCD-204	ENST00000477794	WDR61	Q9GZS3	305 aa	Known RBP	12.48	□□□□□ -0.41
PRKCD-204	ENST00000477794	IGHV3-16	A0A0C4DH30	117 aa		12.47	□□□□□ -0.41
PRKCD-204	ENST00000477794	RHOH	Q15669	191 aa		12.47	□□□□□ -0.41
PRKCD-204	ENST00000477794	OTOR	Q9NRC9	128 aa		12.47	□□□□□ -0.41
PRKCD-204	ENST00000477794	LOC100131303	A0A0U1RQF7	123 aa		12.46	□□□□□ -0.41
PRKCD-204	ENST00000477794	TAAR5	O14804	337 aa		12.46	□□□□□ -0.41
PRKCD-204	ENST00000477794	KCNRG	Q8N5I3	272 aa		12.46	□□□□□ -0.41
PRKCD-204	ENST00000477794	ARL6IP6	Q8N6S5	226 aa		12.46	□□□□□ -0.41
PRKCD-204	ENST00000477794	HSPB11	Q9Y547	144 aa		12.46	□□□□□ -0.41
PRKCD-204	ENST00000477794	TRBV6-4	A0A1B0GX49	114 aa		12.45	□□□□□ -0.42
PRKCD-204	ENST00000477794	KANTR	A0A1W2PQU2	76 aa		12.45	□□□□□ -0.42
PRKCD-204	ENST00000477794	RNF222	A6NCQ9	220 aa		12.45	□□□□□ -0.42
PRKCD-204	ENST00000477794	NKX2-5	P52952	324 aa	Predicted RBP	12.45	□□□□□ -0.42
PRKCD-204	ENST00000477794	LELP1	Q5T871	98 aa		12.45	□□□□□ -0.42
PRKCD-204	ENST00000477794	C9orf62	Q8N4C0	152 aa		12.45	□□□□□ -0.42
PRKCD-204	ENST00000477794	DEFB104A	Q8WTQ1	72 aa		12.45	□□□□□ -0.42
PRKCD-204	ENST00000477794	NDFIP1	Q9BT67	221 aa		12.45	□□□□□ -0.42
PRKCD-204	ENST00000477794	TREM1	Q9NP99	234 aa		12.45	□□□□□ -0.42
PRKCD-204	ENST00000477794	RPH3AL	Q9UNE2	315 aa		12.45	□□□□□ -0.42
PRKCD-204	ENST00000477794	GNRH2	O43555	120 aa		12.44	□□□□□ -0.42
PRKCD-204	ENST00000477794	IGHV3-30	P01768	117 aa		12.44	□□□□□ -0.42
PRKCD-204	ENST00000477794	IGHV3-33	P01772	117 aa		12.44	□□□□□ -0.42
PRKCD-204	ENST00000477794	IGHV3-30-3	P0DP02	117 aa		12.44	□□□□□ -0.42
PRKCD-204	ENST00000477794	IGHV3-30-5	P0DP03	117 aa		12.44	□□□□□ -0.42
PRKCD-204	ENST00000477794	LGALSL	Q3ZCW2	172 aa	Predicted RBP	12.44	□□□□□ -0.42
PRKCD-204	ENST00000477794	ZNF876P	Q49A33	203 aa		12.44	□□□□□ -0.42
PRKCD-204	ENST00000477794	TOR2A	Q5JU69	321 aa		12.44	□□□□□ -0.42
PRKCD-204	ENST00000477794	FFAR4	Q5NUL3	377 aa		12.44	□□□□□ -0.42
PRKCD-204	ENST00000477794	TMUB2	Q71RG4	321 aa		12.44	□□□□□ -0.42
PRKCD-204	ENST00000477794	SLC25A29	Q8N8R3	303 aa		12.44	□□□□□ -0.42
PRKCD-204	ENST00000477794	SCGB1C1	Q8TD33	95 aa		12.44	□□□□□ -0.42
PRKCD-204	ENST00000477794	TRAV8-3	A0A0A6YYJ7	113 aa		12.43	□□□□□ -0.42
PRKCD-204	ENST00000477794	PGP	A6NDG6	321 aa		12.43	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms