RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 PAIP2BQ9ULR5 123 aaKnown RBP3.84□□□□□ -1.79
LINC00173-202ENST00000477702 A0A087X0K7 114 aa3.83□□□□□ -1.8
LINC00173-202ENST00000477702 PHOX2AO14813 284 aa3.83□□□□□ -1.8
LINC00173-202ENST00000477702 PITX3O75364 302 aa3.83□□□□□ -1.8
LINC00173-202ENST00000477702 SLC25A5P05141 298 aaKnown RBP3.83□□□□□ -1.8
LINC00173-202ENST00000477702 AP3S2P59780 193 aa3.83□□□□□ -1.8
LINC00173-202ENST00000477702 ERCC8Q13216 396 aa3.83□□□□□ -1.8
LINC00173-202ENST00000477702 IL18Q14116 193 aa3.83□□□□□ -1.8
LINC00173-202ENST00000477702 SMCO1Q147U7 214 aa3.83□□□□□ -1.8
LINC00173-202ENST00000477702 KIAA1644Q3SXP7 199 aa3.83□□□□□ -1.8
LINC00173-202ENST00000477702 SH2D6Q7Z4S9 175 aa3.83□□□□□ -1.8
LINC00173-202ENST00000477702 CLVS1Q8IUQ0 354 aaPredicted RBP3.83□□□□□ -1.8
LINC00173-202ENST00000477702 OR10G4Q8NGN3 311 aa3.83□□□□□ -1.8
LINC00173-202ENST00000477702 LHFPL5Q8TAF8 219 aa3.83□□□□□ -1.8
LINC00173-202ENST00000477702 DPH3Q96FX2 82 aa3.83□□□□□ -1.8
LINC00173-202ENST00000477702 DIRAS2Q96HU8 199 aa3.83□□□□□ -1.8
LINC00173-202ENST00000477702 LINC00477Q96M19 166 aa3.83□□□□□ -1.8
LINC00173-202ENST00000477702 CIB3Q96Q77 187 aaPredicted RBP3.83□□□□□ -1.8
LINC00173-202ENST00000477702 RBKSQ9H477 322 aa3.83□□□□□ -1.8
LINC00173-202ENST00000477702 ZNF331Q9NQX6 463 aaPredicted RBP3.83□□□□□ -1.8
LINC00173-202ENST00000477702 MCUBQ9NWR8 336 aa3.83□□□□□ -1.8
LINC00173-202ENST00000477702 RSL24D1Q9UHA3 163 aaKnown RBP3.83□□□□□ -1.8
LINC00173-202ENST00000477702 HIGD1AQ9Y241 93 aa3.83□□□□□ -1.8
LINC00173-202ENST00000477702 KIF25-AS1Q9Y6Z4 181 aa3.83□□□□□ -1.8
LINC00173-202ENST00000477702 TRAV8-1A0A0A6YYK1 113 aa3.82□□□□□ -1.8
LINC00173-202ENST00000477702 A0A0B4J2A0 478 aa3.82□□□□□ -1.8
LINC00173-202ENST00000477702 GGTLC3B5MD39 225 aa3.82□□□□□ -1.8
LINC00173-202ENST00000477702 SLC17A3O00476 420 aa3.82□□□□□ -1.8
LINC00173-202ENST00000477702 NOL3O60936 208 aaKnown RBP3.82□□□□□ -1.8
LINC00173-202ENST00000477702 MPDU1O75352 247 aa3.82□□□□□ -1.8
LINC00173-202ENST00000477702 OR5G3P0C626 314 aa3.82□□□□□ -1.8
LINC00173-202ENST00000477702 IBA57Q5T440 356 aaKnown RBP3.82□□□□□ -1.8
LINC00173-202ENST00000477702 PRR27Q6MZM9 219 aa3.82□□□□□ -1.8
LINC00173-202ENST00000477702 ACOT7LQ6ZUV0 252 aa3.82□□□□□ -1.8
LINC00173-202ENST00000477702 OR51S1Q8NGJ8 323 aa3.82□□□□□ -1.8
LINC00173-202ENST00000477702 PRAC1Q96KF2 57 aa3.82□□□□□ -1.8
LINC00173-202ENST00000477702 RTBDNQ9BSG5 229 aaPredicted RBP3.82□□□□□ -1.8
LINC00173-202ENST00000477702 SHPKQ9UHJ6 478 aa3.82□□□□□ -1.8
LINC00173-202ENST00000477702 GPR132Q9UNW8 380 aa3.82□□□□□ -1.8
LINC00173-202ENST00000477702 IGHV1OR15-1A0A075B7D0 117 aa3.81□□□□□ -1.8
LINC00173-202ENST00000477702 DUXBA0A1W2PPF3 345 aa3.81□□□□□ -1.8
LINC00173-202ENST00000477702 KLLNB2CW77 178 aa3.81□□□□□ -1.8
LINC00173-202ENST00000477702 WRBO00258 174 aa3.81□□□□□ -1.8
LINC00173-202ENST00000477702 MRPS12O15235 138 aaKnown RBP3.81□□□□□ -1.8
LINC00173-202ENST00000477702 HYPMO75409 117 aa3.81□□□□□ -1.8
LINC00173-202ENST00000477702 PFN1P07737 140 aaKnown RBP3.81□□□□□ -1.8
LINC00173-202ENST00000477702 CHTF8P0CG12 524 aa3.81□□□□□ -1.8
LINC00173-202ENST00000477702 AKR1C1Q04828 323 aa3.81□□□□□ -1.8
LINC00173-202ENST00000477702 ZNF876PQ49A33 203 aa3.81□□□□□ -1.8
LINC00173-202ENST00000477702 PRR9Q5T870 116 aa3.81□□□□□ -1.8
LINC00173-202ENST00000477702 LCN15Q6UWW0 184 aa3.81□□□□□ -1.8
LINC00173-202ENST00000477702 SDIM1Q6ZPB5 146 aa3.81□□□□□ -1.8
LINC00173-202ENST00000477702 OR4C5Q8NGB2 326 aa3.81□□□□□ -1.8
LINC00173-202ENST00000477702 OR4D10Q8NGI6 311 aa3.81□□□□□ -1.8
LINC00173-202ENST00000477702 SMIM4Q8WVI0 70 aa3.81□□□□□ -1.8
LINC00173-202ENST00000477702 RMI2Q96E14 147 aa3.81□□□□□ -1.8
LINC00173-202ENST00000477702 ZC2HC1AQ96GY0 325 aa3.81□□□□□ -1.8
LINC00173-202ENST00000477702 ODF3Q96PU9 254 aa3.81□□□□□ -1.8
LINC00173-202ENST00000477702 LITAFQ99732 161 aa3.81□□□□□ -1.8
LINC00173-202ENST00000477702 SMCO3A2RU48 225 aa3.8□□□□□ -1.8
LINC00173-202ENST00000477702 CTDSPLO15194 276 aa3.8□□□□□ -1.8
LINC00173-202ENST00000477702 IL5P05113 134 aa3.8□□□□□ -1.8
LINC00173-202ENST00000477702 GPX1P07203 203 aa3.8□□□□□ -1.8
LINC00173-202ENST00000477702 OR4E1P0C645 316 aa3.8□□□□□ -1.8
LINC00173-202ENST00000477702 IAPPP10997 89 aa3.8□□□□□ -1.8
LINC00173-202ENST00000477702 SLC25A6P12236 298 aa3.8□□□□□ -1.8
LINC00173-202ENST00000477702 GATA1P15976 413 aaPredicted RBP3.8□□□□□ -1.8
LINC00173-202ENST00000477702 INPP1P49441 399 aa3.8□□□□□ -1.8
LINC00173-202ENST00000477702 SELENOTP62341 195 aa3.8□□□□□ -1.8
LINC00173-202ENST00000477702 PRR3P79522 188 aaKnown RBP3.8□□□□□ -1.8
LINC00173-202ENST00000477702 OPCMLQ14982 345 aa3.8□□□□□ -1.8
LINC00173-202ENST00000477702 C14orf177Q52M58 125 aa3.8□□□□□ -1.8
LINC00173-202ENST00000477702 TMEM128Q5BJH2 165 aa3.8□□□□□ -1.8
LINC00173-202ENST00000477702 MUC21Q5SSG8 566 aa3.8□□□□□ -1.8
LINC00173-202ENST00000477702 CST9LP1Q5W188 147 aa3.8□□□□□ -1.8
LINC00173-202ENST00000477702 FAAP20Q6NZ36 180 aa3.8□□□□□ -1.8
LINC00173-202ENST00000477702 REG3GQ6UW15 175 aa3.8□□□□□ -1.8
LINC00173-202ENST00000477702 DPPA3Q6W0C5 159 aa3.8□□□□□ -1.8
LINC00173-202ENST00000477702 NOTCH2NLQ7Z3S9 236 aa3.8□□□□□ -1.8
LINC00173-202ENST00000477702 LYZL2Q7Z4W2 148 aa3.8□□□□□ -1.8
LINC00173-202ENST00000477702 RASL10AQ92737 203 aa3.8□□□□□ -1.8
LINC00173-202ENST00000477702 UBE2WQ96B02 151 aa3.8□□□□□ -1.8
LINC00173-202ENST00000477702 SLC50A1Q9BRV3 221 aa3.8□□□□□ -1.8
LINC00173-202ENST00000477702 GTSF1LQ9H1H1 148 aa3.8□□□□□ -1.8
LINC00173-202ENST00000477702 KLK12Q9UKR0 248 aa3.8□□□□□ -1.8
LINC00173-202ENST00000477702 WDR83OSQ9Y284 106 aa3.8□□□□□ -1.8
LINC00173-202ENST00000477702 STRAPQ9Y3F4 350 aaKnown RBP3.8□□□□□ -1.8
LINC00173-202ENST00000477702 TRAV4A0A0B4J268 109 aa3.79□□□□□ -1.8
LINC00173-202ENST00000477702 ANKRD20A5PA0PJZ0 165 aa3.79□□□□□ -1.8
LINC00173-202ENST00000477702 FABP12A6NFH5 140 aa3.79□□□□□ -1.8
LINC00173-202ENST00000477702 H3BQ15 152 aa3.79□□□□□ -1.8
LINC00173-202ENST00000477702 SYNGR2O43760 224 aa3.79□□□□□ -1.8
LINC00173-202ENST00000477702 LINC00869P0C866 280 aa3.79□□□□□ -1.8
LINC00173-202ENST00000477702 CXCL2P19875 107 aa3.79□□□□□ -1.8
LINC00173-202ENST00000477702 S100A5P33763 92 aa3.79□□□□□ -1.8
LINC00173-202ENST00000477702 PRR4Q16378 134 aa3.79□□□□□ -1.8
LINC00173-202ENST00000477702 SPANXN5Q5MJ07 72 aa3.79□□□□□ -1.8
LINC00173-202ENST00000477702 PATE2Q6UY27 113 aa3.79□□□□□ -1.8
LINC00173-202ENST00000477702 CYP2G1PQ6ZSU1 146 aa3.79□□□□□ -1.8
LINC00173-202ENST00000477702 TOMM5Q8N4H5 51 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms