RNA–Protein interactions for RNA: ENST00000477552.1

PTPRD-209, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 4

Gene PTPRD, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-209ENST00000477552 ZNF207O43670 478 aaKnown RBP6.37□□□□□ -1.39
PTPRD-209ENST00000477552 ELANEP08246 267 aa6.37□□□□□ -1.39
PTPRD-209ENST00000477552 FAM159AQ6UWV7 190 aa6.37□□□□□ -1.39
PTPRD-209ENST00000477552 TMEM219Q86XT9 240 aa6.37□□□□□ -1.39
PTPRD-209ENST00000477552 RNF152Q8N8N0 203 aa6.37□□□□□ -1.39
PTPRD-209ENST00000477552 RHPN1-AS1Q9BWJ2 59 aa6.37□□□□□ -1.39
PTPRD-209ENST00000477552 TRAV2A0A0B4J234 112 aa6.36□□□□□ -1.39
PTPRD-209ENST00000477552 GAGE10A6NGK3 116 aa6.36□□□□□ -1.39
PTPRD-209ENST00000477552 LINC01548A6NM66 108 aa6.36□□□□□ -1.39
PTPRD-209ENST00000477552 KLLNB2CW77 178 aa6.36□□□□□ -1.39
PTPRD-209ENST00000477552 F8VRH5 84 aa6.36□□□□□ -1.39
PTPRD-209ENST00000477552 NCR2O95944 276 aa6.36□□□□□ -1.39
PTPRD-209ENST00000477552 SMIM13P0DJ93 91 aa6.36□□□□□ -1.39
PTPRD-209ENST00000477552 NMUP48645 174 aa6.36□□□□□ -1.39
PTPRD-209ENST00000477552 RPL11P62913 178 aaKnown RBP6.36□□□□□ -1.39
PTPRD-209ENST00000477552 CFHR3Q02985 330 aa6.36□□□□□ -1.39
PTPRD-209ENST00000477552 LOXL1Q08397 574 aaPredicted RBP6.36□□□□□ -1.39
PTPRD-209ENST00000477552 ANKRD39Q53RE8 183 aa6.36□□□□□ -1.39
PTPRD-209ENST00000477552 PIK3CD-AS1Q5SR53 167 aa6.36□□□□□ -1.39
PTPRD-209ENST00000477552 IGFL4Q6B9Z1 124 aa6.36□□□□□ -1.39
PTPRD-209ENST00000477552 ADAMTSL5Q6ZMM2 481 aa6.36□□□□□ -1.39
PTPRD-209ENST00000477552 TOMM6Q96B49 74 aa6.36□□□□□ -1.39
PTPRD-209ENST00000477552 TMEM141Q96I45 108 aa6.36□□□□□ -1.39
PTPRD-209ENST00000477552 SCGB3A1Q96QR1 104 aa6.36□□□□□ -1.39
PTPRD-209ENST00000477552 FOXC2Q99958 501 aa6.36□□□□□ -1.39
PTPRD-209ENST00000477552 MSRB1Q9NZV6 116 aa6.36□□□□□ -1.39
PTPRD-209ENST00000477552 HHLA3Q9XRX5 114 aa6.36□□□□□ -1.39
PTPRD-209ENST00000477552 DCHS2Q6V1P9 2916 aa6.36□□□□□ -1.39
PTPRD-209ENST00000477552 BSNQ9UPA5 3926 aa6.35□□□□□ -1.39
PTPRD-209ENST00000477552 IGHV3-66A0A0C4DH42 116 aa6.35□□□□□ -1.39
PTPRD-209ENST00000477552 TMEM238LA0A1B0GVL6 79 aa6.35□□□□□ -1.39
PTPRD-209ENST00000477552 A6NJY4 79 aa6.35□□□□□ -1.39
PTPRD-209ENST00000477552 SMKR1H3BMG3 65 aa6.35□□□□□ -1.39
PTPRD-209ENST00000477552 H3BVH4 76 aa6.35□□□□□ -1.39
PTPRD-209ENST00000477552 VCYO14598 125 aa6.35□□□□□ -1.39
PTPRD-209ENST00000477552 FABP2P12104 132 aa6.35□□□□□ -1.39
PTPRD-209ENST00000477552 CDKN1BP46527 198 aa6.35□□□□□ -1.39
PTPRD-209ENST00000477552 HERVK_113P61574 105 aa6.35□□□□□ -1.39
PTPRD-209ENST00000477552 KIR2DL4Q99706 377 aa6.35□□□□□ -1.39
PTPRD-209ENST00000477552 TM2D2Q9BX73 214 aa6.35□□□□□ -1.39
PTPRD-209ENST00000477552 C11orf21Q9P2W6 132 aa6.35□□□□□ -1.39
PTPRD-209ENST00000477552 SPENQ96T58 3664 aaKnown RBP6.34□□□□□ -1.39
PTPRD-209ENST00000477552 NBASA2RRP1 2371 aa6.34□□□□□ -1.39
PTPRD-209ENST00000477552 IGHV3OR16-8A0A075B7F1 116 aa6.34□□□□□ -1.39
PTPRD-209ENST00000477552 TRBV6-5A0A0K0K1A5 114 aa6.34□□□□□ -1.39
PTPRD-209ENST00000477552 OR11H12B2RN74 326 aa6.34□□□□□ -1.39
PTPRD-209ENST00000477552 C19orf84I3L1E1 186 aa6.34□□□□□ -1.39
PTPRD-209ENST00000477552 PSMB8P28062 276 aa6.34□□□□□ -1.39
PTPRD-209ENST00000477552 ZC2HC1BQ5TFG8 222 aa6.34□□□□□ -1.39
PTPRD-209ENST00000477552 BRD3OSQ6XYD6 125 aa6.34□□□□□ -1.39
PTPRD-209ENST00000477552 Q71RC1 249 aaPredicted RBP6.34□□□□□ -1.39
PTPRD-209ENST00000477552 OR11H1Q8NG94 326 aa6.34□□□□□ -1.39
PTPRD-209ENST00000477552 OR11H2Q8NH07 326 aa6.34□□□□□ -1.39
PTPRD-209ENST00000477552 WFDC12Q8WWY7 111 aa6.34□□□□□ -1.39
PTPRD-209ENST00000477552 CYSLTR1Q9Y271 337 aa6.34□□□□□ -1.39
PTPRD-209ENST00000477552 COL6A6A6NMZ7 2263 aa6.34□□□□□ -1.39
PTPRD-209ENST00000477552 TRGV11A0A075B6L2 103 aa6.33□□□□□ -1.4
PTPRD-209ENST00000477552 CBY3A6NI87 242 aa6.33□□□□□ -1.4
PTPRD-209ENST00000477552 IGHV4-38-2P0DP08 117 aa6.33□□□□□ -1.4
PTPRD-209ENST00000477552 RNASE4P34096 147 aaKnown RBP6.33□□□□□ -1.4
PTPRD-209ENST00000477552 UQCRFS1P47985 274 aa6.33□□□□□ -1.4
PTPRD-209ENST00000477552 CRYBA4P53673 196 aa6.33□□□□□ -1.4
PTPRD-209ENST00000477552 RHOHQ15669 191 aa6.33□□□□□ -1.4
PTPRD-209ENST00000477552 ANXA2RQ3ZCQ2 193 aa6.33□□□□□ -1.4
PTPRD-209ENST00000477552 LYRM7Q5U5X0 104 aa6.33□□□□□ -1.4
PTPRD-209ENST00000477552 UNQ9165/PRO28630Q6UXU0 137 aa6.33□□□□□ -1.4
PTPRD-209ENST00000477552 LRRC75A-AS1Q8N1F1 130 aa6.33□□□□□ -1.4
PTPRD-209ENST00000477552 C20orf173Q96LM9 149 aa6.33□□□□□ -1.4
PTPRD-209ENST00000477552 UBE2E2Q96LR5 201 aa6.33□□□□□ -1.4
PTPRD-209ENST00000477552 C18orf15Q96N68 181 aa6.33□□□□□ -1.4
PTPRD-209ENST00000477552 TIMM17AQ99595 171 aa6.33□□□□□ -1.4
PTPRD-209ENST00000477552 CHAC1Q9BUX1 264 aa6.33□□□□□ -1.4
PTPRD-209ENST00000477552 EDA2RQ9HAV5 297 aa6.33□□□□□ -1.4
PTPRD-209ENST00000477552 DKK2Q9UBU2 259 aa6.33□□□□□ -1.4
PTPRD-209ENST00000477552 CHTOPQ9Y3Y2 248 aaKnown RBP6.33□□□□□ -1.4
PTPRD-209ENST00000477552 SPTBN4Q9H254 2564 aa6.33□□□□□ -1.4
PTPRD-209ENST00000477552 TRBV25-1A0A075B6N4 114 aa6.32□□□□□ -1.4
PTPRD-209ENST00000477552 IGHV3OR16-13A0A075B7E8 117 aa6.32□□□□□ -1.4
PTPRD-209ENST00000477552 IGHV4-30-2A0A087WSY4 118 aa6.32□□□□□ -1.4
PTPRD-209ENST00000477552 IGHV3-49A0A0A0MS15 119 aa6.32□□□□□ -1.4
PTPRD-209ENST00000477552 IGHV3-74A0A0B4J1X5 117 aa6.32□□□□□ -1.4
PTPRD-209ENST00000477552 GAGE12BA1L429 117 aa6.32□□□□□ -1.4
PTPRD-209ENST00000477552 K7EP34 96 aa6.32□□□□□ -1.4
PTPRD-209ENST00000477552 LGALS1P09382 135 aaKnown RBP6.32□□□□□ -1.4
PTPRD-209ENST00000477552 LY6EQ16553 131 aa6.32□□□□□ -1.4
PTPRD-209ENST00000477552 AMMECR1LQ6DCA0 310 aa6.32□□□□□ -1.4
PTPRD-209ENST00000477552 CEND1Q8N111 149 aa6.32□□□□□ -1.4
PTPRD-209ENST00000477552 NEXN-AS1Q8NBZ9 246 aa6.32□□□□□ -1.4
PTPRD-209ENST00000477552 DCANP1Q8TF63 244 aa6.32□□□□□ -1.4
PTPRD-209ENST00000477552 PTH2Q96A98 100 aa6.32□□□□□ -1.4
PTPRD-209ENST00000477552 JMJD8Q96S16 334 aa6.32□□□□□ -1.4
PTPRD-209ENST00000477552 BEX4Q9NWD9 120 aaPredicted RBP6.32□□□□□ -1.4
PTPRD-209ENST00000477552 TMEM160Q9NX00 188 aa6.32□□□□□ -1.4
PTPRD-209ENST00000477552 VPREB3Q9UKI3 123 aa6.32□□□□□ -1.4
PTPRD-209ENST00000477552 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.31□□□□□ -1.4
PTPRD-209ENST00000477552 TRBV27A0A0K0K1C4 114 aa6.31□□□□□ -1.4
PTPRD-209ENST00000477552 A0A1W2PPM0 123 aa6.31□□□□□ -1.4
PTPRD-209ENST00000477552 E9PLD3 99 aa6.31□□□□□ -1.4
PTPRD-209ENST00000477552 J3QR89 54 aa6.31□□□□□ -1.4
PTPRD-209ENST00000477552 COX6B1P14854 86 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms