RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 K7EMT4 169 aa8.35□□□□□ -1.07
HLA-DMB-260ENST00000477537 NPYP01303 97 aa8.35□□□□□ -1.07
HLA-DMB-260ENST00000477537 Q6YL49 198 aa8.35□□□□□ -1.07
HLA-DMB-260ENST00000477537 OR10AG1Q8NH19 301 aa8.35□□□□□ -1.07
HLA-DMB-260ENST00000477537 UQCR10Q9UDW1 63 aa8.35□□□□□ -1.07
HLA-DMB-260ENST00000477537 TMEM89A2RUT3 159 aa8.35□□□□□ -1.07
HLA-DMB-260ENST00000477537 OR4C46A6NHA9 309 aa8.35□□□□□ -1.07
HLA-DMB-260ENST00000477537 H0Y8G0 127 aa8.35□□□□□ -1.07
HLA-DMB-260ENST00000477537 SRD5A1P18405 259 aa8.35□□□□□ -1.07
HLA-DMB-260ENST00000477537 PET117Q6UWS5 81 aa8.35□□□□□ -1.07
HLA-DMB-260ENST00000477537 LRRC75A-AS1Q8N1F1 130 aa8.35□□□□□ -1.07
HLA-DMB-260ENST00000477537 F6UB75 175 aa8.34□□□□□ -1.07
HLA-DMB-260ENST00000477537 RPLP1P05386 114 aaKnown RBP8.34□□□□□ -1.07
HLA-DMB-260ENST00000477537 PRSS57Q6UWY2 283 aa8.34□□□□□ -1.07
HLA-DMB-260ENST00000477537 MRPL52Q86TS9 123 aaKnown RBP8.34□□□□□ -1.07
HLA-DMB-260ENST00000477537 ZFAND2AQ8N6M9 145 aa8.34□□□□□ -1.07
HLA-DMB-260ENST00000477537 OR8A1Q8NGG7 326 aa8.34□□□□□ -1.07
HLA-DMB-260ENST00000477537 UFC1Q9Y3C8 167 aa8.34□□□□□ -1.07
HLA-DMB-260ENST00000477537 IGLL1P15814 213 aa8.33□□□□□ -1.08
HLA-DMB-260ENST00000477537 Q6ZN92 141 aa8.33□□□□□ -1.08
HLA-DMB-260ENST00000477537 Q96MF0 132 aa8.33□□□□□ -1.08
HLA-DMB-260ENST00000477537 MCRIP2Q9BUT9 160 aaKnown RBP8.33□□□□□ -1.08
HLA-DMB-260ENST00000477537 ZNF747Q9BV97 191 aa8.33□□□□□ -1.08
HLA-DMB-260ENST00000477537 KRTAP3-3Q9BYR6 98 aa8.33□□□□□ -1.08
HLA-DMB-260ENST00000477537 KRTAP3-2Q9BYR7 98 aa8.33□□□□□ -1.08
HLA-DMB-260ENST00000477537 ZNF702PQ9H963 129 aa8.33□□□□□ -1.08
HLA-DMB-260ENST00000477537 A0A096LNJ9 63 aa8.33□□□□□ -1.08
HLA-DMB-260ENST00000477537 H3BVH4 76 aa8.33□□□□□ -1.08
HLA-DMB-260ENST00000477537 HOXA3O43365 443 aaPredicted RBP8.33□□□□□ -1.08
HLA-DMB-260ENST00000477537 GAS8-AS1O95177 125 aa8.33□□□□□ -1.08
HLA-DMB-260ENST00000477537 PPBPP02775 128 aa8.33□□□□□ -1.08
HLA-DMB-260ENST00000477537 HNRNPA3P51991 378 aaKnown RBP8.33□□□□□ -1.08
HLA-DMB-260ENST00000477537 WFDC3Q8IUB2 231 aa8.33□□□□□ -1.08
HLA-DMB-260ENST00000477537 KRTAP1-3Q8IUG1 177 aa8.33□□□□□ -1.08
HLA-DMB-260ENST00000477537 TRAV21A0A0B4J279 112 aa8.32□□□□□ -1.08
HLA-DMB-260ENST00000477537 SNAI2O43623 268 aa8.32□□□□□ -1.08
HLA-DMB-260ENST00000477537 TCF21O43680 179 aa8.32□□□□□ -1.08
HLA-DMB-260ENST00000477537 EVI2AP22794 236 aa8.32□□□□□ -1.08
HLA-DMB-260ENST00000477537 RNASE4P34096 147 aaKnown RBP8.32□□□□□ -1.08
HLA-DMB-260ENST00000477537 ID1P41134 155 aa8.32□□□□□ -1.08
HLA-DMB-260ENST00000477537 FXYD7P58549 80 aa8.32□□□□□ -1.08
HLA-DMB-260ENST00000477537 CACNG7P62955 275 aa8.32□□□□□ -1.08
HLA-DMB-260ENST00000477537 SMIM15Q7Z3B0 74 aa8.32□□□□□ -1.08
HLA-DMB-260ENST00000477537 FAM19A4Q96LR4 140 aa8.32□□□□□ -1.08
HLA-DMB-260ENST00000477537 MAP1LC3AQ9H492 121 aa8.32□□□□□ -1.08
HLA-DMB-260ENST00000477537 hDV102S1A0JD36 115 aa8.31□□□□□ -1.08
HLA-DMB-260ENST00000477537 TNFRSF6BO95407 300 aa8.31□□□□□ -1.08
HLA-DMB-260ENST00000477537 GATA1P15976 413 aaPredicted RBP8.31□□□□□ -1.08
HLA-DMB-260ENST00000477537 BATFQ16520 125 aa8.31□□□□□ -1.08
HLA-DMB-260ENST00000477537 SPANXN1Q5VSR9 72 aa8.31□□□□□ -1.08
HLA-DMB-260ENST00000477537 LINC01545Q5VT33 79 aa8.31□□□□□ -1.08
HLA-DMB-260ENST00000477537 IGHV4-4A0A075B6R2 117 aa8.31□□□□□ -1.08
HLA-DMB-260ENST00000477537 HBDP02042 147 aa8.31□□□□□ -1.08
HLA-DMB-260ENST00000477537 ELANEP08246 267 aa8.31□□□□□ -1.08
HLA-DMB-260ENST00000477537 NUTF2P61970 127 aaKnown RBP8.31□□□□□ -1.08
HLA-DMB-260ENST00000477537 WFDC11Q8NEX6 87 aa8.31□□□□□ -1.08
HLA-DMB-260ENST00000477537 PMCHL2Q9BQD1 86 aa8.31□□□□□ -1.08
HLA-DMB-260ENST00000477537 LAMTOR2Q9Y2Q5 125 aa8.31□□□□□ -1.08
HLA-DMB-260ENST00000477537 CUBNO60494 3623 aa8.3□□□□□ -1.08
HLA-DMB-260ENST00000477537 HSBP1L1C9JCN9 74 aa8.3□□□□□ -1.08
HLA-DMB-260ENST00000477537 LGALS1P09382 135 aaKnown RBP8.3□□□□□ -1.08
HLA-DMB-260ENST00000477537 KIR3DS1Q14943 382 aa8.3□□□□□ -1.08
HLA-DMB-260ENST00000477537 DCANP1Q8TF63 244 aa8.3□□□□□ -1.08
HLA-DMB-260ENST00000477537 ST20Q9HBF5 79 aa8.3□□□□□ -1.08
HLA-DMB-260ENST00000477537 SONP18583 2426 aaKnown RBP8.3□□□□□ -1.08
HLA-DMB-260ENST00000477537 IGHV4OR15-8A0A075B7B6 117 aa8.29□□□□□ -1.08
HLA-DMB-260ENST00000477537 A0A087WW49 117 aa8.29□□□□□ -1.08
HLA-DMB-260ENST00000477537 CYSRT1A8MQ03 144 aa8.29□□□□□ -1.08
HLA-DMB-260ENST00000477537 TSPOP30536 169 aa8.29□□□□□ -1.08
HLA-DMB-260ENST00000477537 ASIPP42127 132 aa8.29□□□□□ -1.08
HLA-DMB-260ENST00000477537 TFPI2P48307 235 aa8.29□□□□□ -1.08
HLA-DMB-260ENST00000477537 ANXA2RQ3ZCQ2 193 aa8.29□□□□□ -1.08
HLA-DMB-260ENST00000477537 SAMD13Q5VXD3 122 aa8.29□□□□□ -1.08
HLA-DMB-260ENST00000477537 MYOZ3Q8TDC0 251 aa8.29□□□□□ -1.08
HLA-DMB-260ENST00000477537 DUX5Q96PT3 197 aa8.29□□□□□ -1.08
HLA-DMB-260ENST00000477537 MS4A6AQ9H2W1 248 aa8.29□□□□□ -1.08
HLA-DMB-260ENST00000477537 ANK3Q12955 4377 aaKnown RBP8.29□□□□□ -1.08
HLA-DMB-260ENST00000477537 TRBV7-9A0A0J9YWB2 115 aa8.29□□□□□ -1.08
HLA-DMB-260ENST00000477537 SPRY2O43597 315 aa8.29□□□□□ -1.08
HLA-DMB-260ENST00000477537 S100A4P26447 101 aaKnown RBP8.29□□□□□ -1.08
HLA-DMB-260ENST00000477537 SYNJ2BPP57105 145 aa8.29□□□□□ -1.08
HLA-DMB-260ENST00000477537 APRG1Q8IVJ8 170 aa8.29□□□□□ -1.08
HLA-DMB-260ENST00000477537 NXT2Q9NPJ8 142 aaKnown RBP8.29□□□□□ -1.08
HLA-DMB-260ENST00000477537 TRAV26-2A0A0B4J265 109 aa8.28□□□□□ -1.08
HLA-DMB-260ENST00000477537 LINC01546A6NGU7 62 aa8.28□□□□□ -1.08
HLA-DMB-260ENST00000477537 OR2K2Q8NGT1 345 aa8.28□□□□□ -1.08
HLA-DMB-260ENST00000477537 HIVEP1P15822 2718 aa8.27□□□□□ -1.08
HLA-DMB-260ENST00000477537 M0R381 172 aa8.27□□□□□ -1.09
HLA-DMB-260ENST00000477537 GNRH2O43555 120 aa8.27□□□□□ -1.09
HLA-DMB-260ENST00000477537 ZNF688P0C7X2 276 aa8.27□□□□□ -1.09
HLA-DMB-260ENST00000477537 HOXD3P31249 432 aaPredicted RBP8.27□□□□□ -1.09
HLA-DMB-260ENST00000477537 LEPP41159 167 aa8.27□□□□□ -1.09
HLA-DMB-260ENST00000477537 PSMG4Q5JS54 123 aa8.27□□□□□ -1.09
HLA-DMB-260ENST00000477537 WFDC12Q8WWY7 111 aa8.27□□□□□ -1.09
HLA-DMB-260ENST00000477537 UBE2E2Q96LR5 201 aa8.27□□□□□ -1.09
HLA-DMB-260ENST00000477537 MRPS16Q9Y3D3 137 aaKnown RBP8.27□□□□□ -1.09
HLA-DMB-260ENST00000477537 MXRA5Q9NR99 2828 aa8.27□□□□□ -1.09
HLA-DMB-260ENST00000477537 MAST4O15021 2626 aa8.27□□□□□ -1.09
HLA-DMB-260ENST00000477537 LGALS9O00182 355 aa8.27□□□□□ -1.09
HLA-DMB-260ENST00000477537 RNF152Q8N8N0 203 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms