RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 NOP10Q9NPE3 64 aaKnown RBP9.36□□□□□ -0.91
TOP3A-205ENST00000477508 CSMD3Q7Z407 3707 aa9.35□□□□□ -0.91
TOP3A-205ENST00000477508 ZNF80P51504 273 aaPredicted RBP9.35□□□□□ -0.91
TOP3A-205ENST00000477508 TCL1AP56279 114 aa9.35□□□□□ -0.91
TOP3A-205ENST00000477508 TCTAP57738 103 aa9.35□□□□□ -0.91
TOP3A-205ENST00000477508 C11orf72Q8NBR9 251 aa9.35□□□□□ -0.91
TOP3A-205ENST00000477508 GSN-AS1Q9NRJ2 163 aa9.35□□□□□ -0.91
TOP3A-205ENST00000477508 NAGKQ9UJ70 344 aa9.35□□□□□ -0.91
TOP3A-205ENST00000477508 TP53TG3Q9ULZ0 132 aa9.35□□□□□ -0.91
TOP3A-205ENST00000477508 DEFB131BA0A096LNP1 70 aa9.34□□□□□ -0.91
TOP3A-205ENST00000477508 RBFOX3A6NFN3 312 aa9.34□□□□□ -0.91
TOP3A-205ENST00000477508 NDUFS6O75380 124 aaKnown RBP9.34□□□□□ -0.91
TOP3A-205ENST00000477508 DEFB130BP0DP73 79 aa9.34□□□□□ -0.91
TOP3A-205ENST00000477508 DEFB130AP0DP74 79 aa9.34□□□□□ -0.91
TOP3A-205ENST00000477508 RPL35P42766 123 aaKnown RBP9.34□□□□□ -0.91
TOP3A-205ENST00000477508 LGALS9BQ3B8N2 356 aa9.34□□□□□ -0.91
TOP3A-205ENST00000477508 FAM162BQ5T6X4 162 aa9.34□□□□□ -0.91
TOP3A-205ENST00000477508 Q6ZQT7 251 aa9.34□□□□□ -0.91
TOP3A-205ENST00000477508 BAGE2Q86Y30 109 aa9.34□□□□□ -0.91
TOP3A-205ENST00000477508 SMIM12Q96EX1 92 aa9.34□□□□□ -0.91
TOP3A-205ENST00000477508 FAM210BQ96KR6 192 aa9.34□□□□□ -0.91
TOP3A-205ENST00000477508 SPXQ9BT56 116 aa9.34□□□□□ -0.91
TOP3A-205ENST00000477508 ZNF767PQ75MW2 155 aa9.33□□□□□ -0.92
TOP3A-205ENST00000477508 LINC00612Q8N6U2 182 aa9.33□□□□□ -0.92
TOP3A-205ENST00000477508 ZC2HC1AQ96GY0 325 aa9.33□□□□□ -0.92
TOP3A-205ENST00000477508 MED9Q9NWA0 146 aa9.33□□□□□ -0.92
TOP3A-205ENST00000477508 TMEM250H0YL14 139 aa9.32□□□□□ -0.92
TOP3A-205ENST00000477508 SPINK4O60575 86 aa9.32□□□□□ -0.92
TOP3A-205ENST00000477508 GHRHP01286 108 aa9.32□□□□□ -0.92
TOP3A-205ENST00000477508 ATP5G1P05496 136 aa9.32□□□□□ -0.92
TOP3A-205ENST00000477508 ZNF674Q2M3X9 581 aa9.32□□□□□ -0.92
TOP3A-205ENST00000477508 ZNF506Q5JVG8 444 aa9.32□□□□□ -0.92
TOP3A-205ENST00000477508 C18orf15Q96N68 181 aa9.32□□□□□ -0.92
TOP3A-205ENST00000477508 MLST8Q9BVC4 326 aa9.32□□□□□ -0.92
TOP3A-205ENST00000477508 TENM2Q9NT68 2774 aa9.31□□□□□ -0.92
TOP3A-205ENST00000477508 TRGV1A0A0A0MS02 117 aa9.31□□□□□ -0.92
TOP3A-205ENST00000477508 IGHV3-16A0A0C4DH30 117 aa9.31□□□□□ -0.92
TOP3A-205ENST00000477508 GAGE12BA1L429 117 aa9.31□□□□□ -0.92
TOP3A-205ENST00000477508 GNRH2O43555 120 aa9.31□□□□□ -0.92
TOP3A-205ENST00000477508 GAGE7O76087 117 aa9.31□□□□□ -0.92
TOP3A-205ENST00000477508 ORM1P02763 201 aa9.31□□□□□ -0.92
TOP3A-205ENST00000477508 TYMSP04818 313 aa9.31□□□□□ -0.92
TOP3A-205ENST00000477508 GAGE12FP0CL80 117 aa9.31□□□□□ -0.92
TOP3A-205ENST00000477508 GAGE12GP0CL81 117 aa9.31□□□□□ -0.92
TOP3A-205ENST00000477508 GAGE12IP0CL82 117 aa9.31□□□□□ -0.92
TOP3A-205ENST00000477508 GNG4P50150 75 aa9.31□□□□□ -0.92
TOP3A-205ENST00000477508 FAM210AQ96ND0 272 aa9.31□□□□□ -0.92
TOP3A-205ENST00000477508 EIF5A2Q9GZV4 153 aaKnown RBP9.31□□□□□ -0.92
TOP3A-205ENST00000477508 BIN3Q9NQY0 253 aa9.31□□□□□ -0.92
TOP3A-205ENST00000477508 MDFICQ9P1T7 246 aa9.31□□□□□ -0.92
TOP3A-205ENST00000477508 TRGV2A0A075B6R0 118 aa9.3□□□□□ -0.92
TOP3A-205ENST00000477508 SH2D1AO60880 128 aa9.3□□□□□ -0.92
TOP3A-205ENST00000477508 CRIP1P50238 77 aa9.3□□□□□ -0.92
TOP3A-205ENST00000477508 RAB14P61106 215 aa9.3□□□□□ -0.92
TOP3A-205ENST00000477508 CENPWQ5EE01 88 aa9.3□□□□□ -0.92
TOP3A-205ENST00000477508 Q6ZTI0 123 aa9.3□□□□□ -0.92
TOP3A-205ENST00000477508 DERL1Q9BUN8 251 aa9.3□□□□□ -0.92
TOP3A-205ENST00000477508 C11orf21Q9P2W6 132 aa9.3□□□□□ -0.92
TOP3A-205ENST00000477508 STARD9Q9P2P6 4700 aa9.29□□□□□ -0.92
TOP3A-205ENST00000477508 IGKV3D-20A0A0C4DH25 116 aa9.29□□□□□ -0.92
TOP3A-205ENST00000477508 B4DEV8 164 aa9.29□□□□□ -0.92
TOP3A-205ENST00000477508 IGLL5B9A064 214 aa9.29□□□□□ -0.92
TOP3A-205ENST00000477508 M0R2P5 195 aa9.29□□□□□ -0.92
TOP3A-205ENST00000477508 HTN3P15516 51 aa9.29□□□□□ -0.92
TOP3A-205ENST00000477508 TOR2AQ5JU69 321 aa9.29□□□□□ -0.92
TOP3A-205ENST00000477508 NHLRC2Q8NBF2 726 aa9.29□□□□□ -0.92
TOP3A-205ENST00000477508 RASL10AQ92737 203 aa9.29□□□□□ -0.92
TOP3A-205ENST00000477508 NDUFAF3Q9BU61 184 aa9.29□□□□□ -0.92
TOP3A-205ENST00000477508 DYNC2H1Q8NCM8 4307 aaKnown RBP9.29□□□□□ -0.92
TOP3A-205ENST00000477508 KMT2CQ8NEZ4 4911 aaKnown RBP9.28□□□□□ -0.92
TOP3A-205ENST00000477508 KRBOX1C9JBD0 128 aa9.28□□□□□ -0.92
TOP3A-205ENST00000477508 C9JCJ5 164 aa9.28□□□□□ -0.92
TOP3A-205ENST00000477508 S100A4P26447 101 aaKnown RBP9.28□□□□□ -0.92
TOP3A-205ENST00000477508 ASIPP42127 132 aa9.28□□□□□ -0.92
TOP3A-205ENST00000477508 DNLZQ5SXM8 178 aa9.28□□□□□ -0.92
TOP3A-205ENST00000477508 PTH2Q96A98 100 aa9.28□□□□□ -0.92
TOP3A-205ENST00000477508 SMDT1Q9H4I9 107 aa9.28□□□□□ -0.92
TOP3A-205ENST00000477508 IGHV4-4A0A075B6R2 117 aa9.27□□□□□ -0.93
TOP3A-205ENST00000477508 RAB19A4D1S5 217 aa9.27□□□□□ -0.93
TOP3A-205ENST00000477508 F5H768 121 aa9.27□□□□□ -0.93
TOP3A-205ENST00000477508 DAZAP1Q96EP5 407 aaKnown RBP9.27□□□□□ -0.93
TOP3A-205ENST00000477508 MRPL16Q9NX20 251 aaKnown RBP9.27□□□□□ -0.93
TOP3A-205ENST00000477508 IL36BQ9NZH7 164 aa9.27□□□□□ -0.93
TOP3A-205ENST00000477508 TMEM238LA0A1B0GVL6 79 aa9.26□□□□□ -0.93
TOP3A-205ENST00000477508 M0R036 132 aa9.26□□□□□ -0.93
TOP3A-205ENST00000477508 CXCL1P09341 107 aa9.26□□□□□ -0.93
TOP3A-205ENST00000477508 MGST1P10620 155 aaKnown RBP9.26□□□□□ -0.93
TOP3A-205ENST00000477508 SLAQ13239 276 aa9.26□□□□□ -0.93
TOP3A-205ENST00000477508 OR5I1Q13606 314 aa9.26□□□□□ -0.93
TOP3A-205ENST00000477508 PEA15Q15121 130 aa9.26□□□□□ -0.93
TOP3A-205ENST00000477508 PIK3CD-AS1Q5SR53 167 aa9.26□□□□□ -0.93
TOP3A-205ENST00000477508 PRR27Q6MZM9 219 aa9.26□□□□□ -0.93
TOP3A-205ENST00000477508 C15orf53Q8NAA6 179 aa9.26□□□□□ -0.93
TOP3A-205ENST00000477508 C9orf85Q96MD7 179 aa9.26□□□□□ -0.93
TOP3A-205ENST00000477508 PARLQ9H300 379 aa9.26□□□□□ -0.93
TOP3A-205ENST00000477508 MUC4Q99102 2169 aa9.25□□□□□ -0.93
TOP3A-205ENST00000477508 TRBV20OR9-2A0A075B6H5 130 aa9.25□□□□□ -0.93
TOP3A-205ENST00000477508 CIDEAO60543 219 aa9.25□□□□□ -0.93
TOP3A-205ENST00000477508 IGLV2-8P01709 118 aa9.25□□□□□ -0.93
TOP3A-205ENST00000477508 RNASE3P12724 160 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms