RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 MITD1Q8WV92 249 aa4.44□□□□□ -1.7
RTFDC1-206ENST00000477485 RASL10AQ92737 203 aa4.44□□□□□ -1.7
RTFDC1-206ENST00000477485 ATP5SQ99766 215 aa4.44□□□□□ -1.7
RTFDC1-206ENST00000477485 NPCDR1Q9BY65 106 aa4.44□□□□□ -1.7
RTFDC1-206ENST00000477485 TRAV6A0A075B6T7 132 aa4.43□□□□□ -1.7
RTFDC1-206ENST00000477485 IGLV2-8P01709 118 aa4.43□□□□□ -1.7
RTFDC1-206ENST00000477485 GATA1P15976 413 aaPredicted RBP4.43□□□□□ -1.7
RTFDC1-206ENST00000477485 RHOHQ15669 191 aa4.43□□□□□ -1.7
RTFDC1-206ENST00000477485 VWC2Q2TAL6 325 aa4.43□□□□□ -1.7
RTFDC1-206ENST00000477485 Q6AWC8 147 aa4.43□□□□□ -1.7
RTFDC1-206ENST00000477485 Q8N3U1 123 aa4.43□□□□□ -1.7
RTFDC1-206ENST00000477485 SLC25A29Q8N8R3 303 aa4.43□□□□□ -1.7
RTFDC1-206ENST00000477485 ATP6V0E2Q8NHE4 81 aa4.43□□□□□ -1.7
RTFDC1-206ENST00000477485 CMTM2Q8TAZ6 248 aa4.43□□□□□ -1.7
RTFDC1-206ENST00000477485 BAALCQ8WXS3 180 aa4.43□□□□□ -1.7
RTFDC1-206ENST00000477485 SEC22CQ9BRL7 303 aa4.43□□□□□ -1.7
RTFDC1-206ENST00000477485 NMES1Q9C002 83 aa4.43□□□□□ -1.7
RTFDC1-206ENST00000477485 SDF2L1Q9HCN8 221 aa4.43□□□□□ -1.7
RTFDC1-206ENST00000477485 LYRM2Q9NU23 88 aaPredicted RBP4.43□□□□□ -1.7
RTFDC1-206ENST00000477485 TRBV7-9A0A0J9YWB2 115 aa4.42□□□□□ -1.7
RTFDC1-206ENST00000477485 RBAKDNA6NC62 111 aa4.42□□□□□ -1.7
RTFDC1-206ENST00000477485 TYMSP04818 313 aa4.42□□□□□ -1.7
RTFDC1-206ENST00000477485 TIRAPP58753 221 aa4.42□□□□□ -1.7
RTFDC1-206ENST00000477485 RAB32Q13637 225 aa4.42□□□□□ -1.7
RTFDC1-206ENST00000477485 LAGE3Q14657 143 aa4.42□□□□□ -1.7
RTFDC1-206ENST00000477485 ATP6V1FQ16864 119 aa4.42□□□□□ -1.7
RTFDC1-206ENST00000477485 ZNF876PQ49A33 203 aa4.42□□□□□ -1.7
RTFDC1-206ENST00000477485 LELP1Q5T871 98 aa4.42□□□□□ -1.7
RTFDC1-206ENST00000477485 TMEM252Q8N6L7 170 aa4.42□□□□□ -1.7
RTFDC1-206ENST00000477485 ASB13Q8WXK3 278 aa4.42□□□□□ -1.7
RTFDC1-206ENST00000477485 FXYD5Q96DB9 178 aa4.42□□□□□ -1.7
RTFDC1-206ENST00000477485 FAM167A-AS1Q96KT0 104 aa4.42□□□□□ -1.7
RTFDC1-206ENST00000477485 C2orf50Q96LR7 162 aa4.42□□□□□ -1.7
RTFDC1-206ENST00000477485 GTSF1LQ9H1H1 148 aa4.42□□□□□ -1.7
RTFDC1-206ENST00000477485 KCNIP2Q9NS61 270 aa4.42□□□□□ -1.7
RTFDC1-206ENST00000477485 URGCP-MRPS24S4R325 110 aa4.42□□□□□ -1.7
RTFDC1-206ENST00000477485 IGKV2D-24A0A075B6R9 120 aa4.41□□□□□ -1.7
RTFDC1-206ENST00000477485 TRAV8-3A0A0A6YYJ7 113 aa4.41□□□□□ -1.7
RTFDC1-206ENST00000477485 TRAV21A0A0B4J279 112 aa4.41□□□□□ -1.7
RTFDC1-206ENST00000477485 GAGE12JA6NER3 117 aa4.41□□□□□ -1.7
RTFDC1-206ENST00000477485 GGTLC3B5MD39 225 aa4.41□□□□□ -1.7
RTFDC1-206ENST00000477485 DIRC3C9JPN6 131 aa4.41□□□□□ -1.7
RTFDC1-206ENST00000477485 C17orf112F2Z3M2 114 aa4.41□□□□□ -1.7
RTFDC1-206ENST00000477485 RS1O15537 224 aa4.41□□□□□ -1.7
RTFDC1-206ENST00000477485 OXTP01178 125 aa4.41□□□□□ -1.7
RTFDC1-206ENST00000477485 BTCP35070 178 aa4.41□□□□□ -1.7
RTFDC1-206ENST00000477485 GAGE1Q13065 139 aa4.41□□□□□ -1.7
RTFDC1-206ENST00000477485 GAGE4Q13068 117 aa4.41□□□□□ -1.7
RTFDC1-206ENST00000477485 GAGE5Q13069 117 aa4.41□□□□□ -1.7
RTFDC1-206ENST00000477485 GAGE13Q4V321 117 aa4.41□□□□□ -1.7
RTFDC1-206ENST00000477485 KHDC3LQ587J8 217 aa4.41□□□□□ -1.7
RTFDC1-206ENST00000477485 TOR2AQ5JU69 321 aa4.41□□□□□ -1.7
RTFDC1-206ENST00000477485 FAM74A1Q5RGS3 127 aa4.41□□□□□ -1.7
RTFDC1-206ENST00000477485 Q6ZSA8 131 aa4.41□□□□□ -1.7
RTFDC1-206ENST00000477485 GOLT1AQ6ZVE7 132 aa4.41□□□□□ -1.7
RTFDC1-206ENST00000477485 DAZ4Q86SG3 579 aaKnown RBP4.41□□□□□ -1.7
RTFDC1-206ENST00000477485 OR5C1Q8NGR4 320 aa4.41□□□□□ -1.7
RTFDC1-206ENST00000477485 KCNS1Q96KK3 526 aa4.41□□□□□ -1.7
RTFDC1-206ENST00000477485 MRPL18Q9H0U6 180 aaKnown RBP4.41□□□□□ -1.7
RTFDC1-206ENST00000477485 TREM1Q9NP99 234 aa4.41□□□□□ -1.7
RTFDC1-206ENST00000477485 DAZ3Q9NR90 486 aaKnown RBP4.41□□□□□ -1.7
RTFDC1-206ENST00000477485 TRAV8-1A0A0A6YYK1 113 aa4.4□□□□□ -1.71
RTFDC1-206ENST00000477485 TRBV6-4A0A1B0GX49 114 aa4.4□□□□□ -1.71
RTFDC1-206ENST00000477485 PGPA6NDG6 321 aa4.4□□□□□ -1.71
RTFDC1-206ENST00000477485 EIF3GO75821 320 aaKnown RBP eCLIP4.4□□□□□ -1.71
RTFDC1-206ENST00000477485 IL7P13232 177 aa4.4□□□□□ -1.71
RTFDC1-206ENST00000477485 RPL37AP61513 92 aaKnown RBP4.4□□□□□ -1.71
RTFDC1-206ENST00000477485 NHLH2Q02577 135 aa4.4□□□□□ -1.71
RTFDC1-206ENST00000477485 CNPY1Q3B7I2 92 aa4.4□□□□□ -1.71
RTFDC1-206ENST00000477485 TDRG1Q3Y452 100 aa4.4□□□□□ -1.71
RTFDC1-206ENST00000477485 LRRC37A5PQ49AS3 106 aa4.4□□□□□ -1.71
RTFDC1-206ENST00000477485 FFAR4Q5NUL3 377 aa4.4□□□□□ -1.71
RTFDC1-206ENST00000477485 CFAP126Q5VTH2 177 aa4.4□□□□□ -1.71
RTFDC1-206ENST00000477485 CIRBP-AS1Q8TBR5 109 aa4.4□□□□□ -1.71
RTFDC1-206ENST00000477485 CHAC2Q8WUX2 184 aa4.4□□□□□ -1.71
RTFDC1-206ENST00000477485 ANAPC16Q96DE5 110 aa4.4□□□□□ -1.71
RTFDC1-206ENST00000477485 RMI2Q96E14 147 aa4.4□□□□□ -1.71
RTFDC1-206ENST00000477485 SGK494Q96LW2 274 aa4.4□□□□□ -1.71
RTFDC1-206ENST00000477485 NDFIP1Q9BT67 221 aa4.4□□□□□ -1.71
RTFDC1-206ENST00000477485 CHAC1Q9BUX1 264 aa4.4□□□□□ -1.71
RTFDC1-206ENST00000477485 SH3BGRL3Q9H299 93 aa4.4□□□□□ -1.71
RTFDC1-206ENST00000477485 C11orf1Q9H5F2 150 aa4.4□□□□□ -1.71
RTFDC1-206ENST00000477485 NUDT15Q9NV35 164 aa4.4□□□□□ -1.71
RTFDC1-206ENST00000477485 LENEPQ9Y5L5 61 aa4.4□□□□□ -1.71
RTFDC1-206ENST00000477485 FAT1Q14517 4588 aa4.4□□□□□ -1.71
RTFDC1-206ENST00000477485 LYRM1O43325 122 aa4.39□□□□□ -1.71
RTFDC1-206ENST00000477485 TCRBP04435 133 aa4.39□□□□□ -1.71
RTFDC1-206ENST00000477485 MGST1P10620 155 aaKnown RBP4.39□□□□□ -1.71
RTFDC1-206ENST00000477485 TAS2R45P59539 299 aa4.39□□□□□ -1.71
RTFDC1-206ENST00000477485 GNG5P63218 68 aa4.39□□□□□ -1.71
RTFDC1-206ENST00000477485 ACOT6Q3I5F7 207 aaPredicted RBP4.39□□□□□ -1.71
RTFDC1-206ENST00000477485 ZFP69Q49AA0 526 aa4.39□□□□□ -1.71
RTFDC1-206ENST00000477485 ZNF506Q5JVG8 444 aa4.39□□□□□ -1.71
RTFDC1-206ENST00000477485 KCNIP4Q6PIL6 250 aa4.39□□□□□ -1.71
RTFDC1-206ENST00000477485 DPPA3Q6W0C5 159 aa4.39□□□□□ -1.71
RTFDC1-206ENST00000477485 Q8N976 141 aa4.39□□□□□ -1.71
RTFDC1-206ENST00000477485 OR2T35Q8NGX2 323 aa4.39□□□□□ -1.71
RTFDC1-206ENST00000477485 MBD2Q9UBB5 411 aa4.39□□□□□ -1.71
RTFDC1-206ENST00000477485 COX11Q9Y6N1 276 aa4.39□□□□□ -1.71
RTFDC1-206ENST00000477485 PGPEP1LA6NFU8 196 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms