RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 IGHV4-59P01825 116 aa8.59□□□□□ -1.03
COL27A1-204ENST00000477421 DTX2Q86UW9 622 aa8.59□□□□□ -1.03
COL27A1-204ENST00000477421 NPBQ8NG41 125 aa8.59□□□□□ -1.03
COL27A1-204ENST00000477421 KNCNA6PVL3 124 aa8.58□□□□□ -1.04
COL27A1-204ENST00000477421 WIPF2Q8TF74 440 aaPredicted RBP8.58□□□□□ -1.04
COL27A1-204ENST00000477421 TP73-AS1Q9UF72 201 aa8.58□□□□□ -1.04
COL27A1-204ENST00000477421 AKAP13Q12802 2813 aa8.58□□□□□ -1.04
COL27A1-204ENST00000477421 INS-IGF2F8WCM5 200 aa8.58□□□□□ -1.04
COL27A1-204ENST00000477421 TP53TG3Q9ULZ0 132 aa8.58□□□□□ -1.04
COL27A1-204ENST00000477421 SPCS1Q9Y6A9 102 aa8.58□□□□□ -1.04
COL27A1-204ENST00000477421 LGALS3P17931 250 aaKnown RBP8.58□□□□□ -1.04
COL27A1-204ENST00000477421 SP5Q6BEB4 398 aaPredicted RBP8.58□□□□□ -1.04
COL27A1-204ENST00000477421 CFHR4Q92496 578 aa8.58□□□□□ -1.04
COL27A1-204ENST00000477421 USMG5Q96IX5 58 aa8.58□□□□□ -1.04
COL27A1-204ENST00000477421 KLF12Q9Y4X4 402 aa8.58□□□□□ -1.04
COL27A1-204ENST00000477421 TNFRSF18Q9Y5U5 241 aa8.58□□□□□ -1.04
COL27A1-204ENST00000477421 FAM223BA6NKX1 122 aa8.57□□□□□ -1.04
COL27A1-204ENST00000477421 BUB3O43684 328 aa8.57□□□□□ -1.04
COL27A1-204ENST00000477421 PAX1P15863 534 aa8.57□□□□□ -1.04
COL27A1-204ENST00000477421 ANXA2RQ3ZCQ2 193 aa8.57□□□□□ -1.04
COL27A1-204ENST00000477421 FAM223AQ8IWN6 122 aa8.57□□□□□ -1.04
COL27A1-204ENST00000477421 ORAOV1Q8WV07 137 aa8.57□□□□□ -1.04
COL27A1-204ENST00000477421 CSTL1Q9H114 145 aa8.57□□□□□ -1.04
COL27A1-204ENST00000477421 KLK9Q9UKQ9 250 aa8.57□□□□□ -1.04
COL27A1-204ENST00000477421 LOC400499M0QZD8 3231 aa8.57□□□□□ -1.04
COL27A1-204ENST00000477421 KIR2DL5BA0A0G2JN68 375 aa8.57□□□□□ -1.04
COL27A1-204ENST00000477421 KIR2DL5BA0A0G2JPC4 375 aa8.57□□□□□ -1.04
COL27A1-204ENST00000477421 TMEM8BA6NDV4 472 aa8.57□□□□□ -1.04
COL27A1-204ENST00000477421 NPIPB6E9PJ23 425 aa8.57□□□□□ -1.04
COL27A1-204ENST00000477421 FBXL19-AS1Q494R0 122 aa8.57□□□□□ -1.04
COL27A1-204ENST00000477421 KIR2DL5AQ8N109 375 aa8.57□□□□□ -1.04
COL27A1-204ENST00000477421 MS4A6AQ9H2W1 248 aa8.57□□□□□ -1.04
COL27A1-204ENST00000477421 YAE1D1Q9NRH1 226 aa8.57□□□□□ -1.04
COL27A1-204ENST00000477421 CYSLTR1Q9Y271 337 aa8.57□□□□□ -1.04
COL27A1-204ENST00000477421 TRBV12-3P01733 135 aa8.56□□□□□ -1.04
COL27A1-204ENST00000477421 DKK2Q9UBU2 259 aa8.56□□□□□ -1.04
COL27A1-204ENST00000477421 GNRH2O43555 120 aa8.56□□□□□ -1.04
COL27A1-204ENST00000477421 DPH3P1Q9H4G8 78 aa8.56□□□□□ -1.04
COL27A1-204ENST00000477421 DEFB131AP59861 70 aa8.55□□□□□ -1.04
COL27A1-204ENST00000477421 DEFB112Q30KQ8 113 aa8.55□□□□□ -1.04
COL27A1-204ENST00000477421 ZNF747Q9BV97 191 aa8.55□□□□□ -1.04
COL27A1-204ENST00000477421 MRPL16Q9NX20 251 aaKnown RBP8.55□□□□□ -1.04
COL27A1-204ENST00000477421 A0A0U1RRA0 63 aa8.55□□□□□ -1.04
COL27A1-204ENST00000477421 DEFB136Q30KP8 78 aa8.55□□□□□ -1.04
COL27A1-204ENST00000477421 ORMDL2Q53FV1 153 aa8.55□□□□□ -1.04
COL27A1-204ENST00000477421 UBE2E2Q96LR5 201 aa8.55□□□□□ -1.04
COL27A1-204ENST00000477421 RNF114Q9Y508 228 aa8.55□□□□□ -1.04
COL27A1-204ENST00000477421 RRN3P1Q2M238 152 aa8.55□□□□□ -1.04
COL27A1-204ENST00000477421 ZNF876PQ49A33 203 aa8.55□□□□□ -1.04
COL27A1-204ENST00000477421 UNQ9165/PRO28630Q6UXU0 137 aa8.55□□□□□ -1.04
COL27A1-204ENST00000477421 TTTY13Q9BZ97 58 aa8.55□□□□□ -1.04
COL27A1-204ENST00000477421 GEMIN7Q9H840 131 aaKnown RBP8.55□□□□□ -1.04
COL27A1-204ENST00000477421 ZNF815PA8K554 130 aa8.54□□□□□ -1.04
COL27A1-204ENST00000477421 ZNF80P51504 273 aaPredicted RBP8.54□□□□□ -1.04
COL27A1-204ENST00000477421 LMO4P61968 165 aa8.54□□□□□ -1.04
COL27A1-204ENST00000477421 Q71RC1 249 aaPredicted RBP8.54□□□□□ -1.04
COL27A1-204ENST00000477421 LINC01356Q8N9X3 169 aa8.54□□□□□ -1.04
COL27A1-204ENST00000477421 SIRPDQ9H106 197 aa8.54□□□□□ -1.04
COL27A1-204ENST00000477421 ANKRD17O75179 2603 aaKnown RBP8.54□□□□□ -1.04
COL27A1-204ENST00000477421 RIPPLY3P57055 190 aa8.54□□□□□ -1.04
COL27A1-204ENST00000477421 MRPS16Q9Y3D3 137 aaKnown RBP8.54□□□□□ -1.04
COL27A1-204ENST00000477421 WI2-2373I1.2A0A1W2PRP0 233 aa8.54□□□□□ -1.04
COL27A1-204ENST00000477421 C19orf71A6NCJ1 209 aa8.54□□□□□ -1.04
COL27A1-204ENST00000477421 PPP1R17O96001 155 aa8.54□□□□□ -1.04
COL27A1-204ENST00000477421 LOXL1Q08397 574 aaPredicted RBP8.54□□□□□ -1.04
COL27A1-204ENST00000477421 LY6G5BQ8NDX9 201 aa8.54□□□□□ -1.04
COL27A1-204ENST00000477421 KLHL30-AS1Q8NEE0 82 aa8.54□□□□□ -1.04
COL27A1-204ENST00000477421 ZNF418Q8TF45 676 aaPredicted RBP8.54□□□□□ -1.04
COL27A1-204ENST00000477421 MLST8Q9BVC4 326 aa8.54□□□□□ -1.04
COL27A1-204ENST00000477421 VCX2Q9H322 139 aa8.54□□□□□ -1.04
COL27A1-204ENST00000477421 FLNBO75369 2602 aaKnown RBP8.53□□□□□ -1.04
COL27A1-204ENST00000477421 IGHV3-53P01767 116 aa8.53□□□□□ -1.04
COL27A1-204ENST00000477421 CRYGBP07316 175 aa8.53□□□□□ -1.04
COL27A1-204ENST00000477421 C5orf56Q8N8D9 126 aa8.53□□□□□ -1.04
COL27A1-204ENST00000477421 MRPL35Q9NZE8 188 aaKnown RBP8.53□□□□□ -1.04
COL27A1-204ENST00000477421 CDKN1BP46527 198 aa8.53□□□□□ -1.04
COL27A1-204ENST00000477421 KLF5Q13887 457 aaPredicted RBP8.53□□□□□ -1.04
COL27A1-204ENST00000477421 MEGF9Q9H1U4 602 aa8.53□□□□□ -1.04
COL27A1-204ENST00000477421 COX11Q9Y6N1 276 aa8.53□□□□□ -1.04
COL27A1-204ENST00000477421 MUC3AQ02505 3323 aa8.53□□□□□ -1.04
COL27A1-204ENST00000477421 NDUFA4O00483 81 aa8.53□□□□□ -1.04
COL27A1-204ENST00000477421 SUMO2P61956 95 aaKnown RBP8.53□□□□□ -1.04
COL27A1-204ENST00000477421 PCP2Q8IVA1 136 aa8.53□□□□□ -1.04
COL27A1-204ENST00000477421 AJUBAQ96IF1 538 aa8.53□□□□□ -1.04
COL27A1-204ENST00000477421 KIR3DS1Q14943 382 aa8.52□□□□□ -1.05
COL27A1-204ENST00000477421 DMXL2Q8TDJ6 3036 aa8.52□□□□□ -1.05
COL27A1-204ENST00000477421 A0A1W2PPR1 153 aa8.52□□□□□ -1.05
COL27A1-204ENST00000477421 VWC2LB2RUY7 222 aa8.52□□□□□ -1.05
COL27A1-204ENST00000477421 HSD52Q0P140 79 aa8.52□□□□□ -1.05
COL27A1-204ENST00000477421 C2orf66Q6UXQ4 117 aa8.52□□□□□ -1.05
COL27A1-204ENST00000477421 MBD6Q96DN6 1003 aa8.52□□□□□ -1.05
COL27A1-204ENST00000477421 UBE2V1Q13404 147 aa8.51□□□□□ -1.05
COL27A1-204ENST00000477421 STHQ8IWL8 128 aa8.51□□□□□ -1.05
COL27A1-204ENST00000477421 Q96MF0 132 aa8.51□□□□□ -1.05
COL27A1-204ENST00000477421 TRGV2A0A075B6R0 118 aa8.51□□□□□ -1.05
COL27A1-204ENST00000477421 LY6LH3BQJ8 138 aa8.51□□□□□ -1.05
COL27A1-204ENST00000477421 H7C1H1 209 aa8.51□□□□□ -1.05
COL27A1-204ENST00000477421 K7EMI3 77 aa8.51□□□□□ -1.05
COL27A1-204ENST00000477421 DUSP14O95147 198 aaKnown RBP8.51□□□□□ -1.05
COL27A1-204ENST00000477421 DSCR9P59020 149 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms