RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 DERL1Q9BUN8 251 aa12.24□□□□□ -0.45
SMARCD3-210ENST00000477169 TEX48A0A1B0GUV7 120 aa12.23□□□□□ -0.45
SMARCD3-210ENST00000477169 RPL35P42766 123 aaKnown RBP12.23□□□□□ -0.45
SMARCD3-210ENST00000477169 MUC21Q5SSG8 566 aa12.23□□□□□ -0.45
SMARCD3-210ENST00000477169 COX8CQ7Z4L0 72 aa12.23□□□□□ -0.45
SMARCD3-210ENST00000477169 NDUFAF3Q9BU61 184 aa12.23□□□□□ -0.45
SMARCD3-210ENST00000477169 DKK2Q9UBU2 259 aa12.23□□□□□ -0.45
SMARCD3-210ENST00000477169 TP53TG3Q9ULZ0 132 aa12.23□□□□□ -0.45
SMARCD3-210ENST00000477169 CBY3A6NI87 242 aa12.22□□□□□ -0.45
SMARCD3-210ENST00000477169 PFN1P07737 140 aaKnown RBP12.22□□□□□ -0.45
SMARCD3-210ENST00000477169 IFITM2Q01629 132 aa12.22□□□□□ -0.45
SMARCD3-210ENST00000477169 TOR2AQ5JU69 321 aa12.22□□□□□ -0.45
SMARCD3-210ENST00000477169 FAM222AQ5U5X8 452 aa12.22□□□□□ -0.45
SMARCD3-210ENST00000477169 ZC2HC1AQ96GY0 325 aa12.22□□□□□ -0.45
SMARCD3-210ENST00000477169 FAM210AQ96ND0 272 aa12.22□□□□□ -0.45
SMARCD3-210ENST00000477169 CRIP1P50238 77 aa12.21□□□□□ -0.45
SMARCD3-210ENST00000477169 FAM159AQ6UWV7 190 aa12.21□□□□□ -0.45
SMARCD3-210ENST00000477169 BAGE2Q86Y30 109 aa12.21□□□□□ -0.45
SMARCD3-210ENST00000477169 TMEM183AQ8IXX5 376 aa12.21□□□□□ -0.45
SMARCD3-210ENST00000477169 C11orf72Q8NBR9 251 aa12.21□□□□□ -0.45
SMARCD3-210ENST00000477169 MED9Q9NWA0 146 aa12.21□□□□□ -0.45
SMARCD3-210ENST00000477169 C11orf21Q9P2W6 132 aa12.21□□□□□ -0.45
SMARCD3-210ENST00000477169 NAGKQ9UJ70 344 aa12.21□□□□□ -0.45
SMARCD3-210ENST00000477169 P0DMU3 169 aa12.2□□□□□ -0.46
SMARCD3-210ENST00000477169 FAM231AP0DMU4 169 aa12.2□□□□□ -0.46
SMARCD3-210ENST00000477169 FAM231CP0DMU5 169 aa12.2□□□□□ -0.46
SMARCD3-210ENST00000477169 TDRG1Q3Y452 100 aa12.2□□□□□ -0.46
SMARCD3-210ENST00000477169 NHLRC2Q8NBF2 726 aa12.2□□□□□ -0.46
SMARCD3-210ENST00000477169 FAM210BQ96KR6 192 aa12.2□□□□□ -0.46
SMARCD3-210ENST00000477169 MLST8Q9BVC4 326 aa12.2□□□□□ -0.46
SMARCD3-210ENST00000477169 EIF5A2Q9GZV4 153 aaKnown RBP12.2□□□□□ -0.46
SMARCD3-210ENST00000477169 GSN-AS1Q9NRJ2 163 aa12.2□□□□□ -0.46
SMARCD3-210ENST00000477169 TIMM8BQ9Y5J9 83 aaPredicted RBP12.2□□□□□ -0.46
SMARCD3-210ENST00000477169 RAB19A4D1S5 217 aa12.19□□□□□ -0.46
SMARCD3-210ENST00000477169 LYRM9A8MSI8 78 aa12.19□□□□□ -0.46
SMARCD3-210ENST00000477169 FABP5P3A8MUU1 101 aa12.19□□□□□ -0.46
SMARCD3-210ENST00000477169 NOP10Q9NPE3 64 aaKnown RBP12.19□□□□□ -0.46
SMARCD3-210ENST00000477169 SNURFLB1AK76 121 aa12.18□□□□□ -0.46
SMARCD3-210ENST00000477169 TMEM250H0YL14 139 aa12.18□□□□□ -0.46
SMARCD3-210ENST00000477169 GNRH2O43555 120 aa12.18□□□□□ -0.46
SMARCD3-210ENST00000477169 NDUFS6O75380 124 aaKnown RBP12.18□□□□□ -0.46
SMARCD3-210ENST00000477169 ZNF674Q2M3X9 581 aa12.18□□□□□ -0.46
SMARCD3-210ENST00000477169 CENPWQ5EE01 88 aa12.18□□□□□ -0.46
SMARCD3-210ENST00000477169 IBA57Q5T440 356 aaKnown RBP12.18□□□□□ -0.46
SMARCD3-210ENST00000477169 POM121L12Q8N7R1 296 aa12.18□□□□□ -0.46
SMARCD3-210ENST00000477169 MDFICQ9P1T7 246 aa12.18□□□□□ -0.46
SMARCD3-210ENST00000477169 TRBV20OR9-2A0A075B6H5 130 aa12.17□□□□□ -0.46
SMARCD3-210ENST00000477169 TRGV11A0A075B6L2 103 aa12.17□□□□□ -0.46
SMARCD3-210ENST00000477169 SH2D1AO60880 128 aa12.17□□□□□ -0.46
SMARCD3-210ENST00000477169 IGLV2-8P01709 118 aa12.17□□□□□ -0.46
SMARCD3-210ENST00000477169 TCL1AP56279 114 aa12.17□□□□□ -0.46
SMARCD3-210ENST00000477169 DAZ2Q13117 558 aaKnown RBP12.17□□□□□ -0.46
SMARCD3-210ENST00000477169 FAM162BQ5T6X4 162 aa12.17□□□□□ -0.46
SMARCD3-210ENST00000477169 KCNS1Q96KK3 526 aa12.17□□□□□ -0.46
SMARCD3-210ENST00000477169 SDF2L1Q9HCN8 221 aa12.17□□□□□ -0.46
SMARCD3-210ENST00000477169 TYMSP04818 313 aa12.16□□□□□ -0.46
SMARCD3-210ENST00000477169 GNG4P50150 75 aa12.16□□□□□ -0.46
SMARCD3-210ENST00000477169 RAB14P61106 215 aa12.16□□□□□ -0.46
SMARCD3-210ENST00000477169 ZNF415Q09FC8 603 aa12.16□□□□□ -0.46
SMARCD3-210ENST00000477169 IGKV3D-20A0A0C4DH25 116 aa12.15□□□□□ -0.46
SMARCD3-210ENST00000477169 IGHV3-16A0A0C4DH30 117 aa12.15□□□□□ -0.46
SMARCD3-210ENST00000477169 SRP19P09132 144 aaKnown RBP12.15□□□□□ -0.46
SMARCD3-210ENST00000477169 DAD1P61803 113 aa12.15□□□□□ -0.46
SMARCD3-210ENST00000477169 LINC00612Q8N6U2 182 aa12.15□□□□□ -0.46
SMARCD3-210ENST00000477169 PARLQ9H300 379 aa12.15□□□□□ -0.46
SMARCD3-210ENST00000477169 HECTD4Q9Y4D8 3996 aa12.14□□□□□ -0.47
SMARCD3-210ENST00000477169 ORM1P02763 201 aa12.14□□□□□ -0.47
SMARCD3-210ENST00000477169 DEFB130BP0DP73 79 aa12.14□□□□□ -0.47
SMARCD3-210ENST00000477169 DEFB130AP0DP74 79 aa12.14□□□□□ -0.47
SMARCD3-210ENST00000477169 SRSF3P84103 164 aaKnown RBP12.14□□□□□ -0.47
SMARCD3-210ENST00000477169 CLLU1Q5K131 121 aa12.14□□□□□ -0.47
SMARCD3-210ENST00000477169 SMIM12Q96EX1 92 aa12.14□□□□□ -0.47
SMARCD3-210ENST00000477169 PGPEP1LA6NFU8 196 aa12.13□□□□□ -0.47
SMARCD3-210ENST00000477169 KRBOX1C9JBD0 128 aa12.13□□□□□ -0.47
SMARCD3-210ENST00000477169 C9JCJ5 164 aa12.13□□□□□ -0.47
SMARCD3-210ENST00000477169 C9JQL5 133 aa12.13□□□□□ -0.47
SMARCD3-210ENST00000477169 SPINK4O60575 86 aa12.13□□□□□ -0.47
SMARCD3-210ENST00000477169 HTN3P15516 51 aa12.13□□□□□ -0.47
SMARCD3-210ENST00000477169 CEBPGP53567 150 aa12.13□□□□□ -0.47
SMARCD3-210ENST00000477169 PRR27Q6MZM9 219 aa12.13□□□□□ -0.47
SMARCD3-210ENST00000477169 Q6ZTI0 123 aa12.13□□□□□ -0.47
SMARCD3-210ENST00000477169 GAGE12BA1L429 117 aa12.12□□□□□ -0.47
SMARCD3-210ENST00000477169 B4DEV8 164 aa12.12□□□□□ -0.47
SMARCD3-210ENST00000477169 M0R036 132 aa12.12□□□□□ -0.47
SMARCD3-210ENST00000477169 GAGE7O76087 117 aa12.12□□□□□ -0.47
SMARCD3-210ENST00000477169 GAGE12FP0CL80 117 aa12.12□□□□□ -0.47
SMARCD3-210ENST00000477169 GAGE12GP0CL81 117 aa12.12□□□□□ -0.47
SMARCD3-210ENST00000477169 GAGE12IP0CL82 117 aa12.12□□□□□ -0.47
SMARCD3-210ENST00000477169 MGST1P10620 155 aaKnown RBP12.12□□□□□ -0.47
SMARCD3-210ENST00000477169 PEA15Q15121 130 aa12.12□□□□□ -0.47
SMARCD3-210ENST00000477169 LINC01559Q495D7 138 aa12.12□□□□□ -0.47
SMARCD3-210ENST00000477169 LINC00336Q6ZUF6 198 aa12.12□□□□□ -0.47
SMARCD3-210ENST00000477169 ZNF575Q86XF7 245 aa12.12□□□□□ -0.47
SMARCD3-210ENST00000477169 SPXQ9BT56 116 aa12.12□□□□□ -0.47
SMARCD3-210ENST00000477169 DNAH2Q9P225 4427 aa12.11□□□□□ -0.47
SMARCD3-210ENST00000477169 TRGV1A0A0A0MS02 117 aa12.11□□□□□ -0.47
SMARCD3-210ENST00000477169 MRPL16Q9NX20 251 aaKnown RBP12.11□□□□□ -0.47
SMARCD3-210ENST00000477169 DNAH17Q9UFH2 4485 aa12.1□□□□□ -0.47
SMARCD3-210ENST00000477169 RNASE3P12724 160 aaKnown RBP12.1□□□□□ -0.47
SMARCD3-210ENST00000477169 LGALS9BQ3B8N2 356 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms