RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 MGST1P10620 155 aaKnown RBP12.73□□□□□ -0.37
SREBF1-211ENST00000476994 TMEM256Q8N2U0 113 aa12.73□□□□□ -0.37
SREBF1-211ENST00000476994 OVOL2Q9BRP0 275 aa12.73□□□□□ -0.37
SREBF1-211ENST00000476994 TP53TG1Q9Y2A0 90 aa12.73□□□□□ -0.37
SREBF1-211ENST00000476994 CARHSP1Q9Y2V2 147 aaKnown RBP12.73□□□□□ -0.37
SREBF1-211ENST00000476994 IGKV3D-20A0A0C4DH25 116 aa12.72□□□□□ -0.37
SREBF1-211ENST00000476994 F8W036 122 aa12.72□□□□□ -0.37
SREBF1-211ENST00000476994 H7BYZ3 331 aa12.72□□□□□ -0.37
SREBF1-211ENST00000476994 TDRG1Q3Y452 100 aa12.72□□□□□ -0.37
SREBF1-211ENST00000476994 ISOC2Q96AB3 205 aa12.72□□□□□ -0.37
SREBF1-211ENST00000476994 NIPSNAP3BQ9BS92 247 aa12.72□□□□□ -0.37
SREBF1-211ENST00000476994 GOLT1BQ9Y3E0 138 aa12.72□□□□□ -0.37
SREBF1-211ENST00000476994 PRM2P04554 102 aa12.71□□□□□ -0.37
SREBF1-211ENST00000476994 LINC01559Q495D7 138 aa12.71□□□□□ -0.37
SREBF1-211ENST00000476994 PRR27Q6MZM9 219 aa12.71□□□□□ -0.37
SREBF1-211ENST00000476994 NEU1Q99519 415 aa12.71□□□□□ -0.37
SREBF1-211ENST00000476994 PYGO2Q9BRQ0 406 aa12.71□□□□□ -0.37
SREBF1-211ENST00000476994 IGHV1OR15-1A0A075B7D0 117 aa12.7□□□□□ -0.38
SREBF1-211ENST00000476994 SPRY2O43597 315 aa12.7□□□□□ -0.38
SREBF1-211ENST00000476994 ANXA2RQ3ZCQ2 193 aa12.7□□□□□ -0.38
SREBF1-211ENST00000476994 MUC21Q5SSG8 566 aa12.7□□□□□ -0.38
SREBF1-211ENST00000476994 FAM231DQ6ZW35 169 aa12.7□□□□□ -0.38
SREBF1-211ENST00000476994 BIN3Q9NQY0 253 aa12.7□□□□□ -0.38
SREBF1-211ENST00000476994 KRBOX1C9JBD0 128 aa12.69□□□□□ -0.38
SREBF1-211ENST00000476994 ADIRFQ15847 76 aa12.69□□□□□ -0.38
SREBF1-211ENST00000476994 NUDT10Q8NFP7 164 aa12.69□□□□□ -0.38
SREBF1-211ENST00000476994 NUDT11Q96G61 164 aa12.69□□□□□ -0.38
SREBF1-211ENST00000476994 LINC01587Q99440 93 aa12.69□□□□□ -0.38
SREBF1-211ENST00000476994 RNASE7Q9H1E1 156 aaKnown RBP12.69□□□□□ -0.38
SREBF1-211ENST00000476994 TP53TG3Q9ULZ0 132 aa12.69□□□□□ -0.38
SREBF1-211ENST00000476994 DNAH1Q9P2D7 4330 aa12.68□□□□□ -0.38
SREBF1-211ENST00000476994 IGHV3OR16-12A0A075B7B8 117 aa12.68□□□□□ -0.38
SREBF1-211ENST00000476994 ZNF705GA8MUZ8 300 aaPredicted RBP12.68□□□□□ -0.38
SREBF1-211ENST00000476994 AZU1P20160 251 aa12.68□□□□□ -0.38
SREBF1-211ENST00000476994 RPL19P84098 196 aaKnown RBP12.68□□□□□ -0.38
SREBF1-211ENST00000476994 PNRC1Q12796 327 aaPredicted RBP12.68□□□□□ -0.38
SREBF1-211ENST00000476994 OR11H2Q8NH07 326 aa12.68□□□□□ -0.38
SREBF1-211ENST00000476994 NACAE9PAV3 2078 aa12.67□□□□□ -0.38
SREBF1-211ENST00000476994 PLAC8L1A1L4L8 177 aa12.67□□□□□ -0.38
SREBF1-211ENST00000476994 TYMSP04818 313 aa12.67□□□□□ -0.38
SREBF1-211ENST00000476994 Q8NAQ8 132 aa12.67□□□□□ -0.38
SREBF1-211ENST00000476994 C11orf72Q8NBR9 251 aa12.67□□□□□ -0.38
SREBF1-211ENST00000476994 RNASE8Q8TDE3 154 aaKnown RBP12.67□□□□□ -0.38
SREBF1-211ENST00000476994 TMEM208Q9BTX3 173 aa12.67□□□□□ -0.38
SREBF1-211ENST00000476994 OSTCQ9NRP0 149 aa12.67□□□□□ -0.38
SREBF1-211ENST00000476994 NAGKQ9UJ70 344 aa12.67□□□□□ -0.38
SREBF1-211ENST00000476994 SMIM9A6NGZ8 99 aa12.66□□□□□ -0.38
SREBF1-211ENST00000476994 M0R036 132 aa12.66□□□□□ -0.38
SREBF1-211ENST00000476994 GNRH2O43555 120 aa12.66□□□□□ -0.38
SREBF1-211ENST00000476994 DNLZQ5SXM8 178 aa12.66□□□□□ -0.38
SREBF1-211ENST00000476994 IBA57Q5T440 356 aaKnown RBP12.66□□□□□ -0.38
SREBF1-211ENST00000476994 FAM159AQ6UWV7 190 aa12.66□□□□□ -0.38
SREBF1-211ENST00000476994 IGHV3-16A0A0C4DH30 117 aa12.65□□□□□ -0.38
SREBF1-211ENST00000476994 B4DEV8 164 aa12.65□□□□□ -0.38
SREBF1-211ENST00000476994 P01737 135 aa12.65□□□□□ -0.38
SREBF1-211ENST00000476994 ORM1P02763 201 aa12.65□□□□□ -0.38
SREBF1-211ENST00000476994 CXCL1P09341 107 aa12.65□□□□□ -0.38
SREBF1-211ENST00000476994 SFRP2Q96HF1 295 aa12.65□□□□□ -0.38
SREBF1-211ENST00000476994 KCNS1Q96KK3 526 aa12.65□□□□□ -0.38
SREBF1-211ENST00000476994 V9GYV3 84 aa12.65□□□□□ -0.38
SREBF1-211ENST00000476994 CXorf65A6NEN9 183 aa12.64□□□□□ -0.39
SREBF1-211ENST00000476994 RNASE3P12724 160 aaKnown RBP12.64□□□□□ -0.39
SREBF1-211ENST00000476994 MIFP14174 115 aa12.64□□□□□ -0.39
SREBF1-211ENST00000476994 ERVFC1-1P60608 527 aa12.64□□□□□ -0.39
SREBF1-211ENST00000476994 RRN3P1Q2M238 152 aa12.64□□□□□ -0.39
SREBF1-211ENST00000476994 OR2D3Q8NGH3 330 aa12.64□□□□□ -0.39
SREBF1-211ENST00000476994 TMEM263Q8WUH6 116 aaKnown RBP12.64□□□□□ -0.39
SREBF1-211ENST00000476994 DAZAP1Q96EP5 407 aaKnown RBP12.64□□□□□ -0.39
SREBF1-211ENST00000476994 RPP21Q9H633 154 aaKnown RBP12.64□□□□□ -0.39
SREBF1-211ENST00000476994 MDFICQ9P1T7 246 aa12.64□□□□□ -0.39
SREBF1-211ENST00000476994 TMSB15BA0A087X1C1 80 aa12.63□□□□□ -0.39
SREBF1-211ENST00000476994 IGHV4-28A0A0C4DH34 117 aa12.63□□□□□ -0.39
SREBF1-211ENST00000476994 TMEM189A5PLL7 270 aa12.63□□□□□ -0.39
SREBF1-211ENST00000476994 CBY3A6NI87 242 aa12.63□□□□□ -0.39
SREBF1-211ENST00000476994 HTN1P15515 57 aa12.63□□□□□ -0.39
SREBF1-211ENST00000476994 CT83Q5H943 113 aa12.63□□□□□ -0.39
SREBF1-211ENST00000476994 TRGV11A0A075B6L2 103 aa12.62□□□□□ -0.39
SREBF1-211ENST00000476994 NUPR2A6NF83 97 aa12.62□□□□□ -0.39
SREBF1-211ENST00000476994 GATCO43716 136 aaKnown RBP12.62□□□□□ -0.39
SREBF1-211ENST00000476994 RNF212Q495C1 297 aa12.62□□□□□ -0.39
SREBF1-211ENST00000476994 ZNF493Q6ZR52 646 aa12.62□□□□□ -0.39
SREBF1-211ENST00000476994 OR10G8Q8NGN5 311 aa12.62□□□□□ -0.39
SREBF1-211ENST00000476994 C16orf74Q96GX8 76 aa12.62□□□□□ -0.39
SREBF1-211ENST00000476994 C9orf85Q96MD7 179 aa12.62□□□□□ -0.39
SREBF1-211ENST00000476994 EPPK1P58107 5090 aaKnown RBP12.61□□□□□ -0.39
SREBF1-211ENST00000476994 GRIFINA4D1Z8 144 aa12.61□□□□□ -0.39
SREBF1-211ENST00000476994 APOC3P02656 99 aa12.61□□□□□ -0.39
SREBF1-211ENST00000476994 IGLC6P0CF74 106 aa12.61□□□□□ -0.39
SREBF1-211ENST00000476994 GZMBP10144 247 aa12.61□□□□□ -0.39
SREBF1-211ENST00000476994 TCL1AP56279 114 aa12.61□□□□□ -0.39
SREBF1-211ENST00000476994 CLRN3Q8NCR9 226 aa12.61□□□□□ -0.39
SREBF1-211ENST00000476994 GSN-AS1Q9NRJ2 163 aa12.61□□□□□ -0.39
SREBF1-211ENST00000476994 RPS20P60866 119 aaKnown RBP12.6□□□□□ -0.39
SREBF1-211ENST00000476994 C15orf54Q8N8G6 183 aa12.6□□□□□ -0.39
SREBF1-211ENST00000476994 GTSF1Q8WW33 167 aa12.6□□□□□ -0.39
SREBF1-211ENST00000476994 C11orf68Q9H3H3 251 aaKnown RBP12.6□□□□□ -0.39
SREBF1-211ENST00000476994 SCRT2Q9NQ03 307 aa12.6□□□□□ -0.39
SREBF1-211ENST00000476994 SNAI2O43623 268 aa12.59□□□□□ -0.39
SREBF1-211ENST00000476994 MED14OSP0DP75 135 aa12.59□□□□□ -0.39
SREBF1-211ENST00000476994 ZNF415Q09FC8 603 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms