RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 LYPD6BQ8NI32 183 aa12.59□□□□□ -0.39
SMIM4-202ENST00000476842 FAM210BQ96KR6 192 aa12.59□□□□□ -0.39
SMIM4-202ENST00000476842 MDFICQ9P1T7 246 aa12.59□□□□□ -0.39
SMIM4-202ENST00000476842 C11orf21Q9P2W6 132 aa12.59□□□□□ -0.39
SMIM4-202ENST00000476842 APLNQ9ULZ1 77 aa12.59□□□□□ -0.39
SMIM4-202ENST00000476842 IGHV4-4A0A075B6R2 117 aa12.58□□□□□ -0.4
SMIM4-202ENST00000476842 LCE6AA0A183 80 aa12.58□□□□□ -0.4
SMIM4-202ENST00000476842 GAGE12BA1L429 117 aa12.58□□□□□ -0.4
SMIM4-202ENST00000476842 GAGE7O76087 117 aa12.58□□□□□ -0.4
SMIM4-202ENST00000476842 ATP5G1P05496 136 aa12.58□□□□□ -0.4
SMIM4-202ENST00000476842 GAGE12FP0CL80 117 aa12.58□□□□□ -0.4
SMIM4-202ENST00000476842 GAGE12GP0CL81 117 aa12.58□□□□□ -0.4
SMIM4-202ENST00000476842 GAGE12IP0CL82 117 aa12.58□□□□□ -0.4
SMIM4-202ENST00000476842 HTN3P15516 51 aa12.58□□□□□ -0.4
SMIM4-202ENST00000476842 TAGLN2P37802 199 aaKnown RBP12.58□□□□□ -0.4
SMIM4-202ENST00000476842 LGALS9BQ3B8N2 356 aa12.58□□□□□ -0.4
SMIM4-202ENST00000476842 Q6ZTI0 123 aa12.58□□□□□ -0.4
SMIM4-202ENST00000476842 C11orf52Q96A22 123 aa12.58□□□□□ -0.4
SMIM4-202ENST00000476842 SPXQ9BT56 116 aa12.58□□□□□ -0.4
SMIM4-202ENST00000476842 SDF2L1Q9HCN8 221 aa12.58□□□□□ -0.4
SMIM4-202ENST00000476842 BCL2P10415 239 aa12.57□□□□□ -0.4
SMIM4-202ENST00000476842 CRIP1P50238 77 aa12.57□□□□□ -0.4
SMIM4-202ENST00000476842 MEF2BQ02080 365 aaPredicted RBP12.57□□□□□ -0.4
SMIM4-202ENST00000476842 ZC2HC1AQ96GY0 325 aa12.57□□□□□ -0.4
SMIM4-202ENST00000476842 C18orf15Q96N68 181 aa12.57□□□□□ -0.4
SMIM4-202ENST00000476842 VAX2Q9UIW0 290 aa12.57□□□□□ -0.4
SMIM4-202ENST00000476842 LYSTQ99698 3801 aa12.56□□□□□ -0.4
SMIM4-202ENST00000476842 TRGV1A0A0A0MS02 117 aa12.56□□□□□ -0.4
SMIM4-202ENST00000476842 IGHV3-16A0A0C4DH30 117 aa12.56□□□□□ -0.4
SMIM4-202ENST00000476842 PDE6DO43924 150 aa12.56□□□□□ -0.4
SMIM4-202ENST00000476842 TYMSP04818 313 aa12.56□□□□□ -0.4
SMIM4-202ENST00000476842 DNAH1Q9P2D7 4330 aa12.56□□□□□ -0.4
SMIM4-202ENST00000476842 ZNF674Q2M3X9 581 aa12.55□□□□□ -0.4
SMIM4-202ENST00000476842 BAGE2Q86Y30 109 aa12.55□□□□□ -0.4
SMIM4-202ENST00000476842 NDUFAF3Q9BU61 184 aa12.55□□□□□ -0.4
SMIM4-202ENST00000476842 MLST8Q9BVC4 326 aa12.55□□□□□ -0.4
SMIM4-202ENST00000476842 TRGV2A0A075B6R0 118 aa12.54□□□□□ -0.4
SMIM4-202ENST00000476842 F5H768 121 aa12.54□□□□□ -0.4
SMIM4-202ENST00000476842 RPL35P42766 123 aaKnown RBP12.54□□□□□ -0.4
SMIM4-202ENST00000476842 FAM162BQ5T6X4 162 aa12.54□□□□□ -0.4
SMIM4-202ENST00000476842 TEX261Q6UWH6 196 aa12.54□□□□□ -0.4
SMIM4-202ENST00000476842 IGKV3D-20A0A0C4DH25 116 aa12.53□□□□□ -0.4
SMIM4-202ENST00000476842 LINC00476Q8WZB0 136 aa12.53□□□□□ -0.4
SMIM4-202ENST00000476842 RASL10AQ92737 203 aa12.53□□□□□ -0.4
SMIM4-202ENST00000476842 MED9Q9NWA0 146 aa12.53□□□□□ -0.4
SMIM4-202ENST00000476842 MRPL16Q9NX20 251 aaKnown RBP12.53□□□□□ -0.4
SMIM4-202ENST00000476842 ALMS1Q8TCU4 4167 aa12.52□□□□□ -0.4
SMIM4-202ENST00000476842 RBFOX3A6NFN3 312 aa12.52□□□□□ -0.41
SMIM4-202ENST00000476842 SH2D1AO60880 128 aa12.52□□□□□ -0.41
SMIM4-202ENST00000476842 LGALS9CQ6DKI2 356 aa12.52□□□□□ -0.41
SMIM4-202ENST00000476842 TMEM88Q6PEY1 159 aa12.52□□□□□ -0.41
SMIM4-202ENST00000476842 NHLRC2Q8NBF2 726 aa12.52□□□□□ -0.41
SMIM4-202ENST00000476842 DERL1Q9BUN8 251 aa12.52□□□□□ -0.41
SMIM4-202ENST00000476842 KRBOX1C9JBD0 128 aa12.51□□□□□ -0.41
SMIM4-202ENST00000476842 M0R2P5 195 aa12.51□□□□□ -0.41
SMIM4-202ENST00000476842 ORM1P02763 201 aa12.51□□□□□ -0.41
SMIM4-202ENST00000476842 B4DEV8 164 aa12.5□□□□□ -0.41
SMIM4-202ENST00000476842 HOXA5P20719 270 aa12.5□□□□□ -0.41
SMIM4-202ENST00000476842 C9orf85Q96MD7 179 aa12.5□□□□□ -0.41
SMIM4-202ENST00000476842 RYR3Q15413 4870 aa12.49□□□□□ -0.41
SMIM4-202ENST00000476842 RAB19A4D1S5 217 aa12.49□□□□□ -0.41
SMIM4-202ENST00000476842 LY6G6CO95867 125 aa12.49□□□□□ -0.41
SMIM4-202ENST00000476842 RNASE3P12724 160 aaKnown RBP12.49□□□□□ -0.41
SMIM4-202ENST00000476842 OR5I1Q13606 314 aa12.49□□□□□ -0.41
SMIM4-202ENST00000476842 LINC01559Q495D7 138 aa12.49□□□□□ -0.41
SMIM4-202ENST00000476842 ZNF506Q5JVG8 444 aa12.49□□□□□ -0.41
SMIM4-202ENST00000476842 DNLZQ5SXM8 178 aa12.49□□□□□ -0.41
SMIM4-202ENST00000476842 ZNF575Q86XF7 245 aa12.49□□□□□ -0.41
SMIM4-202ENST00000476842 C15orf53Q8NAA6 179 aa12.49□□□□□ -0.41
SMIM4-202ENST00000476842 PTH2Q96A98 100 aa12.49□□□□□ -0.41
SMIM4-202ENST00000476842 IGLV2-8P01709 118 aa12.48□□□□□ -0.41
SMIM4-202ENST00000476842 CENPWQ5EE01 88 aa12.48□□□□□ -0.41
SMIM4-202ENST00000476842 SMIM12Q96EX1 92 aa12.48□□□□□ -0.41
SMIM4-202ENST00000476842 VPS13DQ5THJ4 4388 aa12.47□□□□□ -0.41
SMIM4-202ENST00000476842 TMEM250H0YL14 139 aa12.47□□□□□ -0.41
SMIM4-202ENST00000476842 M0R036 132 aa12.47□□□□□ -0.41
SMIM4-202ENST00000476842 NDUFS6O75380 124 aaKnown RBP12.47□□□□□ -0.41
SMIM4-202ENST00000476842 S100A4P26447 101 aaKnown RBP12.47□□□□□ -0.41
SMIM4-202ENST00000476842 ASIPP42127 132 aa12.47□□□□□ -0.41
SMIM4-202ENST00000476842 GNG4P50150 75 aa12.47□□□□□ -0.41
SMIM4-202ENST00000476842 FAM210AQ96ND0 272 aa12.47□□□□□ -0.41
SMIM4-202ENST00000476842 RYR2Q92736 4967 aa12.47□□□□□ -0.41
SMIM4-202ENST00000476842 TRAV26-1A0A087WT03 109 aa12.46□□□□□ -0.41
SMIM4-202ENST00000476842 H3BNG1 76 aa12.46□□□□□ -0.41
SMIM4-202ENST00000476842 IGHV3-53P01767 116 aa12.46□□□□□ -0.41
SMIM4-202ENST00000476842 ZNF876PQ49A33 203 aa12.46□□□□□ -0.41
SMIM4-202ENST00000476842 POM121L12Q8N7R1 296 aa12.46□□□□□ -0.41
SMIM4-202ENST00000476842 EIF5A2Q9GZV4 153 aaKnown RBP12.46□□□□□ -0.41
SMIM4-202ENST00000476842 IL36BQ9NZH7 164 aa12.46□□□□□ -0.41
SMIM4-202ENST00000476842 TRBV20OR9-2A0A075B6H5 130 aa12.45□□□□□ -0.42
SMIM4-202ENST00000476842 TRAV4A0A0B4J268 109 aa12.45□□□□□ -0.42
SMIM4-202ENST00000476842 GRIFINA4D1Z8 144 aa12.45□□□□□ -0.42
SMIM4-202ENST00000476842 C9JCJ5 164 aa12.45□□□□□ -0.42
SMIM4-202ENST00000476842 P0DMU3 169 aa12.45□□□□□ -0.42
SMIM4-202ENST00000476842 FAM231AP0DMU4 169 aa12.45□□□□□ -0.42
SMIM4-202ENST00000476842 FAM231CP0DMU5 169 aa12.45□□□□□ -0.42
SMIM4-202ENST00000476842 SLAQ13239 276 aa12.45□□□□□ -0.42
SMIM4-202ENST00000476842 FHL2Q14192 279 aa12.45□□□□□ -0.42
SMIM4-202ENST00000476842 TOR2AQ5JU69 321 aa12.45□□□□□ -0.42
SMIM4-202ENST00000476842 PRR27Q6MZM9 219 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms