RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 Q9BRP9 147 aa3.32□□□□□ -1.88
NUP58-209ENST00000476553 NDUFB11Q9NX14 153 aa3.32□□□□□ -1.88
NUP58-209ENST00000476553 STRCQ7RTU9 1775 aa3.32□□□□□ -1.88
NUP58-209ENST00000476553 ATRXP46100 2492 aa3.32□□□□□ -1.88
NUP58-209ENST00000476553 PRR14LQ5THK1 2151 aa3.31□□□□□ -1.88
NUP58-209ENST00000476553 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.31□□□□□ -1.88
NUP58-209ENST00000476553 ROBO1Q9Y6N7 1651 aa3.31□□□□□ -1.88
NUP58-209ENST00000476553 CC2D2AQ9P2K1 1620 aa3.31□□□□□ -1.88
NUP58-209ENST00000476553 G3V3Q6 166 aa3.31□□□□□ -1.88
NUP58-209ENST00000476553 SSSCA1O60232 199 aa3.31□□□□□ -1.88
NUP58-209ENST00000476553 ERC2-IT1O76042 136 aa3.31□□□□□ -1.88
NUP58-209ENST00000476553 MT-ATP8P03928 68 aa3.31□□□□□ -1.88
NUP58-209ENST00000476553 ASAH2BP0C7U1 165 aa3.31□□□□□ -1.88
NUP58-209ENST00000476553 ADCYAP1P18509 176 aa3.31□□□□□ -1.88
NUP58-209ENST00000476553 HINT1P49773 126 aaPredicted RBP3.31□□□□□ -1.88
NUP58-209ENST00000476553 DCDP81605 110 aaKnown RBP3.31□□□□□ -1.88
NUP58-209ENST00000476553 SPANXN1Q5VSR9 72 aa3.31□□□□□ -1.88
NUP58-209ENST00000476553 SBSPONQ8IVN8 264 aa3.31□□□□□ -1.88
NUP58-209ENST00000476553 Q8N9L7 120 aa3.31□□□□□ -1.88
NUP58-209ENST00000476553 DPH3P1Q9H4G8 78 aa3.31□□□□□ -1.88
NUP58-209ENST00000476553 LHFPL6Q9Y693 200 aa3.31□□□□□ -1.88
NUP58-209ENST00000476553 SMARCA4P51532 1647 aa3.3□□□□□ -1.88
NUP58-209ENST00000476553 GAPVD1Q14C86 1478 aa3.3□□□□□ -1.88
NUP58-209ENST00000476553 RTEL1-TNFRSF6BF6WH68 1400 aa3.3□□□□□ -1.88
NUP58-209ENST00000476553 IGKV3D-11A0A0A0MRZ8 115 aa3.3□□□□□ -1.88
NUP58-209ENST00000476553 TRAV2A0A0B4J234 112 aa3.3□□□□□ -1.88
NUP58-209ENST00000476553 MUC21A0A140T8X8 626 aa3.3□□□□□ -1.88
NUP58-209ENST00000476553 TCRBV4S1A1TA0A5B7 111 aa3.3□□□□□ -1.88
NUP58-209ENST00000476553 H3BQ15 152 aa3.3□□□□□ -1.88
NUP58-209ENST00000476553 COX7CP15954 63 aa3.3□□□□□ -1.88
NUP58-209ENST00000476553 ATP5EP56381 51 aaPredicted RBP3.3□□□□□ -1.88
NUP58-209ENST00000476553 LY6EQ16553 131 aa3.3□□□□□ -1.88
NUP58-209ENST00000476553 DEFB113Q30KQ7 82 aa3.3□□□□□ -1.88
NUP58-209ENST00000476553 SCN3AQ9NY46 2000 aa3.3□□□□□ -1.88
NUP58-209ENST00000476553 COL24A1Q17RW2 1714 aa3.3□□□□□ -1.88
NUP58-209ENST00000476553 MGAMO43451 1857 aa3.29□□□□□ -1.88
NUP58-209ENST00000476553 TRAV10A0A0B4J240 114 aa3.29□□□□□ -1.88
NUP58-209ENST00000476553 TRAV12-1A0A0B4J245 112 aa3.29□□□□□ -1.88
NUP58-209ENST00000476553 RBAKDNA6NC62 111 aa3.29□□□□□ -1.88
NUP58-209ENST00000476553 HRES1P13985 223 aa3.29□□□□□ -1.88
NUP58-209ENST00000476553 RPL26P61254 145 aaKnown RBP3.29□□□□□ -1.88
NUP58-209ENST00000476553 Q0VG73 95 aa3.29□□□□□ -1.88
NUP58-209ENST00000476553 INSL4Q14641 139 aa3.29□□□□□ -1.88
NUP58-209ENST00000476553 IQCJQ1A5X6 159 aa3.29□□□□□ -1.88
NUP58-209ENST00000476553 SPRNQ5BIV9 151 aa3.29□□□□□ -1.88
NUP58-209ENST00000476553 C5orf38Q86SI9 138 aa3.29□□□□□ -1.88
NUP58-209ENST00000476553 C9orf163Q8N9P6 203 aa3.29□□□□□ -1.88
NUP58-209ENST00000476553 ATG5Q9H1Y0 275 aa3.29□□□□□ -1.88
NUP58-209ENST00000476553 NACAE9PAV3 2078 aa3.29□□□□□ -1.88
NUP58-209ENST00000476553 KIAA1549Q9HCM3 1950 aa3.29□□□□□ -1.88
NUP58-209ENST00000476553 ARHGAP32A7KAX9 2087 aa3.28□□□□□ -1.88
NUP58-209ENST00000476553 UBE2L5PA0A1B0GUS4 154 aa3.28□□□□□ -1.88
NUP58-209ENST00000476553 A0A1W2PNM2 257 aa3.28□□□□□ -1.88
NUP58-209ENST00000476553 IL7P13232 177 aa3.28□□□□□ -1.88
NUP58-209ENST00000476553 UBE2L3P68036 154 aaKnown RBP3.28□□□□□ -1.88
NUP58-209ENST00000476553 ZCCHC23Q6ZST2 131 aa3.28□□□□□ -1.88
NUP58-209ENST00000476553 PRO2289Q9P1D8 64 aa3.28□□□□□ -1.88
NUP58-209ENST00000476553 NDUFA12Q9UI09 145 aa3.28□□□□□ -1.88
NUP58-209ENST00000476553 MYO16Q9Y6X6 1858 aa3.28□□□□□ -1.88
NUP58-209ENST00000476553 ABCC3O15438 1527 aa3.28□□□□□ -1.88
NUP58-209ENST00000476553 MAP3K1Q13233 1512 aa3.28□□□□□ -1.88
NUP58-209ENST00000476553 MYO9BQ13459 2157 aa3.28□□□□□ -1.88
NUP58-209ENST00000476553 RRBP1Q9P2E9 1410 aaKnown RBP3.27□□□□□ -1.89
NUP58-209ENST00000476553 ABCA3Q99758 1704 aa3.27□□□□□ -1.89
NUP58-209ENST00000476553 IGLV4-60A0A075B6I1 120 aa3.27□□□□□ -1.89
NUP58-209ENST00000476553 PIGBOS1A0A0B4J2F0 54 aa3.27□□□□□ -1.89
NUP58-209ENST00000476553 SNCAP37840 140 aa3.27□□□□□ -1.89
NUP58-209ENST00000476553 MIR22HGQ0VDD5 57 aa3.27□□□□□ -1.89
NUP58-209ENST00000476553 C2orf82Q6UX34 121 aa3.27□□□□□ -1.89
NUP58-209ENST00000476553 TMEM141Q96I45 108 aa3.27□□□□□ -1.89
NUP58-209ENST00000476553 C10orf71Q711Q0 1435 aa3.27□□□□□ -1.89
NUP58-209ENST00000476553 IGKV3-11P04433 115 aa3.26□□□□□ -1.89
NUP58-209ENST00000476553 P0C880 135 aa3.26□□□□□ -1.89
NUP58-209ENST00000476553 CXCL8P10145 99 aa3.26□□□□□ -1.89
NUP58-209ENST00000476553 PYDC2Q56P42 97 aa3.26□□□□□ -1.89
NUP58-209ENST00000476553 Q8TAT8 98 aa3.26□□□□□ -1.89
NUP58-209ENST00000476553 NPVFQ9HCQ7 196 aa3.26□□□□□ -1.89
NUP58-209ENST00000476553 BET1LQ9NYM9 111 aa3.26□□□□□ -1.89
NUP58-209ENST00000476553 CPSF1Q10570 1443 aaKnown RBP3.26□□□□□ -1.89
NUP58-209ENST00000476553 CEP162Q5TB80 1403 aa3.26□□□□□ -1.89
NUP58-209ENST00000476553 CASKIN1Q8WXD9 1431 aa3.26□□□□□ -1.89
NUP58-209ENST00000476553 CASZ1Q86V15 1759 aa3.25□□□□□ -1.89
NUP58-209ENST00000476553 ADGRB3O60242 1522 aa3.25□□□□□ -1.89
NUP58-209ENST00000476553 ERICH3Q5RHP9 1530 aa3.25□□□□□ -1.89
NUP58-209ENST00000476553 KDM5DQ9BY66 1539 aa3.25□□□□□ -1.89
NUP58-209ENST00000476553 IGKV2D-24A0A075B6R9 120 aa3.25□□□□□ -1.89
NUP58-209ENST00000476553 DEFB134Q4QY38 66 aa3.25□□□□□ -1.89
NUP58-209ENST00000476553 ZNF833PQ6ZTB9 187 aa3.25□□□□□ -1.89
NUP58-209ENST00000476553 Q6ZTI0 123 aa3.25□□□□□ -1.89
NUP58-209ENST00000476553 ABCC5O15440 1437 aa3.25□□□□□ -1.89
NUP58-209ENST00000476553 DAPK1P53355 1430 aa3.25□□□□□ -1.89
NUP58-209ENST00000476553 MUC4Q99102 2169 aa3.25□□□□□ -1.89
NUP58-209ENST00000476553 SLIT2O94813 1529 aa3.24□□□□□ -1.89
NUP58-209ENST00000476553 KIAA1549LQ6ZVL6 1849 aa3.24□□□□□ -1.89
NUP58-209ENST00000476553 PXDNLA1KZ92 1463 aa3.24□□□□□ -1.89
NUP58-209ENST00000476553 PLEKHH2Q8IVE3 1493 aa3.24□□□□□ -1.89
NUP58-209ENST00000476553 COL16A1Q07092 1604 aaPredicted RBP3.24□□□□□ -1.89
NUP58-209ENST00000476553 RBM3P98179 157 aaKnown RBP3.24□□□□□ -1.89
NUP58-209ENST00000476553 S100A7L2Q5SY68 101 aa3.24□□□□□ -1.89
NUP58-209ENST00000476553 C6orf52Q5T4I8 152 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms