RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 H3BNG1 76 aa11.28□□□□□ -0.6
COL1A1-205ENST00000476387 BCL2L11O43521 198 aa11.28□□□□□ -0.6
COL1A1-205ENST00000476387 FLI1Q01543 452 aaPredicted RBP11.28□□□□□ -0.6
COL1A1-205ENST00000476387 TDRG1Q3Y452 100 aa11.28□□□□□ -0.6
COL1A1-205ENST00000476387 ZNRF2Q8NHG8 242 aa11.28□□□□□ -0.6
COL1A1-205ENST00000476387 STOML3Q8TAV4 291 aa11.28□□□□□ -0.6
COL1A1-205ENST00000476387 SPXQ9BT56 116 aa11.28□□□□□ -0.6
COL1A1-205ENST00000476387 NKX6-2Q9C056 277 aaPredicted RBP11.28□□□□□ -0.6
COL1A1-205ENST00000476387 SDF2L1Q9HCN8 221 aa11.28□□□□□ -0.6
COL1A1-205ENST00000476387 MDFICQ9P1T7 246 aa11.28□□□□□ -0.6
COL1A1-205ENST00000476387 PFDN1O60925 122 aa11.27□□□□□ -0.61
COL1A1-205ENST00000476387 PPT1P50897 306 aa11.27□□□□□ -0.61
COL1A1-205ENST00000476387 EIF5AP63241 154 aaKnown RBP11.27□□□□□ -0.61
COL1A1-205ENST00000476387 PRNTQ86SH4 94 aa11.27□□□□□ -0.61
COL1A1-205ENST00000476387 KCNS1Q96KK3 526 aa11.27□□□□□ -0.61
COL1A1-205ENST00000476387 PKD1P98161 4303 aa11.27□□□□□ -0.61
COL1A1-205ENST00000476387 NBDYA0A0U1RRE5 68 aa11.26□□□□□ -0.61
COL1A1-205ENST00000476387 GCGP01275 180 aa11.26□□□□□ -0.61
COL1A1-205ENST00000476387 IGHV3-53P01767 116 aa11.26□□□□□ -0.61
COL1A1-205ENST00000476387 SEC11BP0C7V7 166 aa11.26□□□□□ -0.61
COL1A1-205ENST00000476387 SMUG1Q53HV7 270 aa11.26□□□□□ -0.61
COL1A1-205ENST00000476387 C8orf49Q96NF6 230 aa11.26□□□□□ -0.61
COL1A1-205ENST00000476387 FAM74A7A6NL05 159 aa11.25□□□□□ -0.61
COL1A1-205ENST00000476387 UMAD1C9J7I0 102 aa11.25□□□□□ -0.61
COL1A1-205ENST00000476387 PEX7O00628 323 aa11.25□□□□□ -0.61
COL1A1-205ENST00000476387 IGLV2-11P01706 119 aa11.25□□□□□ -0.61
COL1A1-205ENST00000476387 TYMSP04818 313 aa11.25□□□□□ -0.61
COL1A1-205ENST00000476387 SAPCD1Q5SSQ6 148 aa11.25□□□□□ -0.61
COL1A1-205ENST00000476387 LINC00588Q9Y4M8 146 aa11.25□□□□□ -0.61
COL1A1-205ENST00000476387 DNAH11Q96DT5 4516 aa11.25□□□□□ -0.61
COL1A1-205ENST00000476387 IGHV3-16A0A0C4DH30 117 aa11.24□□□□□ -0.61
COL1A1-205ENST00000476387 FHITP49789 147 aa11.24□□□□□ -0.61
COL1A1-205ENST00000476387 SLAQ13239 276 aa11.24□□□□□ -0.61
COL1A1-205ENST00000476387 FAM213BQ8TBF2 198 aa11.24□□□□□ -0.61
COL1A1-205ENST00000476387 HIST1H2BAQ96A08 127 aa11.24□□□□□ -0.61
COL1A1-205ENST00000476387 TRAV34A0A0B4J273 112 aa11.23□□□□□ -0.61
COL1A1-205ENST00000476387 TRGV4A0A0C4DH28 118 aa11.23□□□□□ -0.61
COL1A1-205ENST00000476387 M0R2P5 195 aa11.23□□□□□ -0.61
COL1A1-205ENST00000476387 PAX4O43316 350 aa11.23□□□□□ -0.61
COL1A1-205ENST00000476387 GNRH2O43555 120 aa11.23□□□□□ -0.61
COL1A1-205ENST00000476387 PFN1P07737 140 aaKnown RBP11.23□□□□□ -0.61
COL1A1-205ENST00000476387 TPT1P13693 172 aaKnown RBP11.23□□□□□ -0.61
COL1A1-205ENST00000476387 ZNF80P51504 273 aaPredicted RBP11.23□□□□□ -0.61
COL1A1-205ENST00000476387 TMUB2Q71RG4 321 aa11.23□□□□□ -0.61
COL1A1-205ENST00000476387 C6orf223Q8N319 242 aa11.23□□□□□ -0.61
COL1A1-205ENST00000476387 RASL10AQ92737 203 aa11.23□□□□□ -0.61
COL1A1-205ENST00000476387 VSIG2Q96IQ7 327 aa11.23□□□□□ -0.61
COL1A1-205ENST00000476387 PRO0255Q9UI72 69 aa11.23□□□□□ -0.61
COL1A1-205ENST00000476387 ARL2-SNX15V9GYD0 113 aa11.23□□□□□ -0.61
COL1A1-205ENST00000476387 CST9LP1Q5W188 147 aa11.22□□□□□ -0.61
COL1A1-205ENST00000476387 DPPA3Q6W0C5 159 aa11.22□□□□□ -0.61
COL1A1-205ENST00000476387 Q86TA4 180 aa11.22□□□□□ -0.61
COL1A1-205ENST00000476387 SFT2D1Q8WV19 159 aa11.22□□□□□ -0.61
COL1A1-205ENST00000476387 LINC00479Q96M42 142 aa11.22□□□□□ -0.61
COL1A1-205ENST00000476387 TCEAL7Q9BRU2 100 aa11.22□□□□□ -0.61
COL1A1-205ENST00000476387 ICOSQ9Y6W8 199 aa11.22□□□□□ -0.61
COL1A1-205ENST00000476387 DYNC1H1Q14204 4646 aaKnown RBP11.22□□□□□ -0.61
COL1A1-205ENST00000476387 A0A096LPF7 62 aa11.21□□□□□ -0.61
COL1A1-205ENST00000476387 SFTA3P0C7M3 94 aa11.21□□□□□ -0.61
COL1A1-205ENST00000476387 UBE2G1P62253 170 aa11.21□□□□□ -0.61
COL1A1-205ENST00000476387 HHLA3Q9XRX5 114 aa11.21□□□□□ -0.61
COL1A1-205ENST00000476387 TRAV4A0A0B4J268 109 aa11.2□□□□□ -0.62
COL1A1-205ENST00000476387 A0A1B0GV50 99 aa11.2□□□□□ -0.62
COL1A1-205ENST00000476387 CRYBA4P53673 196 aa11.2□□□□□ -0.62
COL1A1-205ENST00000476387 FHL2Q14192 279 aa11.2□□□□□ -0.62
COL1A1-205ENST00000476387 TCTE3Q8IZS6 198 aa11.2□□□□□ -0.62
COL1A1-205ENST00000476387 OR4C5Q8NGB2 326 aa11.2□□□□□ -0.62
COL1A1-205ENST00000476387 MBD3L1Q8WWY6 194 aa11.2□□□□□ -0.62
COL1A1-205ENST00000476387 FMC1Q96HJ9 113 aa11.2□□□□□ -0.62
COL1A1-205ENST00000476387 ZNF479Q96JC4 524 aa11.2□□□□□ -0.62
COL1A1-205ENST00000476387 C11orf21Q9P2W6 132 aa11.2□□□□□ -0.62
COL1A1-205ENST00000476387 PAGE4O60829 102 aa11.19□□□□□ -0.62
COL1A1-205ENST00000476387 H2AFB1P0C5Y9 115 aa11.19□□□□□ -0.62
COL1A1-205ENST00000476387 TNP2Q05952 138 aa11.19□□□□□ -0.62
COL1A1-205ENST00000476387 ESRGQ1W209 222 aa11.19□□□□□ -0.62
COL1A1-205ENST00000476387 TTC32Q5I0X7 151 aa11.19□□□□□ -0.62
COL1A1-205ENST00000476387 ZNF575Q86XF7 245 aa11.19□□□□□ -0.62
COL1A1-205ENST00000476387 PCNPQ8WW12 178 aaKnown RBP11.19□□□□□ -0.62
COL1A1-205ENST00000476387 UPK3BQ9BT76 320 aa11.19□□□□□ -0.62
COL1A1-205ENST00000476387 Q9H8V8 135 aa11.19□□□□□ -0.62
COL1A1-205ENST00000476387 MRPS16Q9Y3D3 137 aaKnown RBP11.19□□□□□ -0.62
COL1A1-205ENST00000476387 AKR1C3P42330 323 aa11.18□□□□□ -0.62
COL1A1-205ENST00000476387 MRPL23Q16540 153 aaKnown RBP11.18□□□□□ -0.62
COL1A1-205ENST00000476387 EIF5AL1Q6IS14 154 aaKnown RBP11.18□□□□□ -0.62
COL1A1-205ENST00000476387 ZFP30Q9Y2G7 519 aa11.18□□□□□ -0.62
COL1A1-205ENST00000476387 RYR1P21817 5038 aa11.17□□□□□ -0.62
COL1A1-205ENST00000476387 FABP5P3A8MUU1 101 aa11.17□□□□□ -0.62
COL1A1-205ENST00000476387 C9JCJ5 164 aa11.17□□□□□ -0.62
COL1A1-205ENST00000476387 S100A4P26447 101 aaKnown RBP11.17□□□□□ -0.62
COL1A1-205ENST00000476387 ZNF876PQ49A33 203 aa11.17□□□□□ -0.62
COL1A1-205ENST00000476387 Q6ZNX1 250 aa11.17□□□□□ -0.62
COL1A1-205ENST00000476387 A0A1W2PPQ1 181 aa11.16□□□□□ -0.62
COL1A1-205ENST00000476387 C1QBP02746 253 aa11.16□□□□□ -0.62
COL1A1-205ENST00000476387 ORM1P02763 201 aa11.16□□□□□ -0.62
COL1A1-205ENST00000476387 SRIP30626 198 aa11.16□□□□□ -0.62
COL1A1-205ENST00000476387 LGALSLQ3ZCW2 172 aaPredicted RBP11.16□□□□□ -0.62
COL1A1-205ENST00000476387 C9orf85Q96MD7 179 aa11.16□□□□□ -0.62
COL1A1-205ENST00000476387 TRBV6-1A0A0K0K1D8 114 aa11.15□□□□□ -0.62
COL1A1-205ENST00000476387 B4DEV8 164 aa11.15□□□□□ -0.62
COL1A1-205ENST00000476387 BTF3P20290 206 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms