RNA–Protein interactions for RNA: ENST00000475491.1

KCNIP3-206, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best)

Gene KCNIP3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-206ENST00000475491 P01737 135 aa8.84□□□□□ -0.99
KCNIP3-206ENST00000475491 HLA-DRB1P01911 266 aa8.84□□□□□ -0.99
KCNIP3-206ENST00000475491 PPIFP30405 207 aaKnown RBP8.84□□□□□ -0.99
KCNIP3-206ENST00000475491 ZNF138P52744 262 aa8.84□□□□□ -0.99
KCNIP3-206ENST00000475491 TMEM75Q8N9X5 138 aa8.84□□□□□ -0.99
KCNIP3-206ENST00000475491 TXNDC17Q9BRA2 123 aa8.84□□□□□ -0.99
KCNIP3-206ENST00000475491 FNDC10F2Z333 226 aa8.83□□□□□ -1
KCNIP3-206ENST00000475491 CRYGCP07315 174 aa8.83□□□□□ -1
KCNIP3-206ENST00000475491 GAGE5Q13069 117 aa8.83□□□□□ -1
KCNIP3-206ENST00000475491 GAGE6Q13070 117 aa8.83□□□□□ -1
KCNIP3-206ENST00000475491 CCDC140Q96MF4 163 aa8.83□□□□□ -1
KCNIP3-206ENST00000475491 C8orf49Q96NF6 230 aa8.83□□□□□ -1
KCNIP3-206ENST00000475491 SPRY2O43597 315 aa8.83□□□□□ -1
KCNIP3-206ENST00000475491 IGKV3-20P01619 116 aa8.83□□□□□ -1
KCNIP3-206ENST00000475491 FCER1GP30273 86 aa8.83□□□□□ -1
KCNIP3-206ENST00000475491 ATP5IP56385 69 aaPredicted RBP8.83□□□□□ -1
KCNIP3-206ENST00000475491 NUP35Q8NFH5 326 aa8.83□□□□□ -1
KCNIP3-206ENST00000475491 C11orf52Q96A22 123 aa8.83□□□□□ -1
KCNIP3-206ENST00000475491 A0A1B0GWB2 263 aa8.83□□□□□ -1
KCNIP3-206ENST00000475491 C9JCJ5 164 aa8.82□□□□□ -1
KCNIP3-206ENST00000475491 CHEK1O14757 476 aa8.82□□□□□ -1
KCNIP3-206ENST00000475491 RNF5Q99942 180 aa8.82□□□□□ -1
KCNIP3-206ENST00000475491 CYSLTR1Q9Y271 337 aa8.82□□□□□ -1
KCNIP3-206ENST00000475491 H3BRM9 83 aa8.82□□□□□ -1
KCNIP3-206ENST00000475491 TCTEX1D4Q5JR98 221 aa8.82□□□□□ -1
KCNIP3-206ENST00000475491 SH2D6Q7Z4S9 175 aa8.82□□□□□ -1
KCNIP3-206ENST00000475491 IGF2BP2-AS1Q96M15 143 aa8.82□□□□□ -1
KCNIP3-206ENST00000475491 GPR82Q96P67 336 aa8.82□□□□□ -1
KCNIP3-206ENST00000475491 PSG8Q9UQ74 426 aa8.82□□□□□ -1
KCNIP3-206ENST00000475491 TRAV9-1A0A075B6T8 112 aa8.82□□□□□ -1
KCNIP3-206ENST00000475491 GATA3P23771 443 aa8.82□□□□□ -1
KCNIP3-206ENST00000475491 ID1P41134 155 aa8.82□□□□□ -1
KCNIP3-206ENST00000475491 NMUP48645 174 aa8.82□□□□□ -1
KCNIP3-206ENST00000475491 NPIPB5A8MRT5 1133 aa8.81□□□□□ -1
KCNIP3-206ENST00000475491 SMIM13P0DJ93 91 aa8.81□□□□□ -1
KCNIP3-206ENST00000475491 ERCC8Q13216 396 aa8.81□□□□□ -1
KCNIP3-206ENST00000475491 NEGR1Q7Z3B1 354 aa8.81□□□□□ -1
KCNIP3-206ENST00000475491 TTC9CQ8N5M4 171 aa8.81□□□□□ -1
KCNIP3-206ENST00000475491 AKAP9Q99996 3911 aa8.81□□□□□ -1
KCNIP3-206ENST00000475491 A0A096LNT2 108 aa8.81□□□□□ -1
KCNIP3-206ENST00000475491 A0A1W2PPM0 123 aa8.81□□□□□ -1
KCNIP3-206ENST00000475491 OR5AL1P0C617 328 aa8.81□□□□□ -1
KCNIP3-206ENST00000475491 FXYD7P58549 80 aa8.81□□□□□ -1
KCNIP3-206ENST00000475491 SPATA12Q7Z6I5 190 aa8.81□□□□□ -1
KCNIP3-206ENST00000475491 JMJD8Q96S16 334 aa8.81□□□□□ -1
KCNIP3-206ENST00000475491 OOSP1A8MZH6 123 aa8.81□□□□□ -1
KCNIP3-206ENST00000475491 OR4X2Q8NGF9 303 aa8.81□□□□□ -1
KCNIP3-206ENST00000475491 C18orf32Q8TCD1 76 aa8.81□□□□□ -1
KCNIP3-206ENST00000475491 AAMDCQ9H7C9 122 aa8.81□□□□□ -1
KCNIP3-206ENST00000475491 COL6A5A8TX70 2615 aa8.8□□□□□ -1
KCNIP3-206ENST00000475491 EBI3Q14213 229 aa8.8□□□□□ -1
KCNIP3-206ENST00000475491 FAM162BQ5T6X4 162 aa8.8□□□□□ -1
KCNIP3-206ENST00000475491 TMEM136Q6ZRR5 245 aa8.8□□□□□ -1
KCNIP3-206ENST00000475491 KRTAP1-3Q8IUG1 177 aa8.8□□□□□ -1
KCNIP3-206ENST00000475491 SYS1-DBNDD2H3BUS1 97 aa8.8□□□□□ -1
KCNIP3-206ENST00000475491 SHANK2-AS3Q9BTD1 123 aa8.79□□□□□ -1
KCNIP3-206ENST00000475491 A6NDX4 124 aa8.79□□□□□ -1
KCNIP3-206ENST00000475491 GDF5OSQ5U4N7 250 aa8.79□□□□□ -1
KCNIP3-206ENST00000475491 Q6ZQT7 251 aa8.79□□□□□ -1
KCNIP3-206ENST00000475491 FAM110DQ8TAY7 271 aaPredicted RBP8.79□□□□□ -1
KCNIP3-206ENST00000475491 DEFB104AQ8WTQ1 72 aa8.79□□□□□ -1
KCNIP3-206ENST00000475491 RABAC1Q9UI14 185 aa8.79□□□□□ -1
KCNIP3-206ENST00000475491 TRBV19A0A075B6N1 114 aa8.79□□□□□ -1
KCNIP3-206ENST00000475491 F6UB75 175 aa8.79□□□□□ -1
KCNIP3-206ENST00000475491 INS-IGF2F8WCM5 200 aa8.79□□□□□ -1
KCNIP3-206ENST00000475491 DSCR9P59020 149 aa8.79□□□□□ -1
KCNIP3-206ENST00000475491 WFDC2Q14508 124 aa8.79□□□□□ -1
KCNIP3-206ENST00000475491 OR8A1Q8NGG7 326 aa8.79□□□□□ -1
KCNIP3-206ENST00000475491 VGLL1Q99990 258 aa8.79□□□□□ -1
KCNIP3-206ENST00000475491 OSTCQ9NRP0 149 aa8.79□□□□□ -1
KCNIP3-206ENST00000475491 PRAC2D3DTV9 90 aa8.78□□□□□ -1
KCNIP3-206ENST00000475491 CITED2Q99967 270 aaPredicted RBP8.78□□□□□ -1
KCNIP3-206ENST00000475491 LOC389332A0A1B0GUA5 103 aa8.78□□□□□ -1
KCNIP3-206ENST00000475491 TEX29Q8N6K0 151 aa8.78□□□□□ -1
KCNIP3-206ENST00000475491 GTSF1Q8WW33 167 aa8.78□□□□□ -1
KCNIP3-206ENST00000475491 EEF1AKMT3Q96AZ1 226 aa8.78□□□□□ -1
KCNIP3-206ENST00000475491 VCX2Q9H322 139 aa8.78□□□□□ -1
KCNIP3-206ENST00000475491 OR11H12B2RN74 326 aa8.78□□□□□ -1
KCNIP3-206ENST00000475491 ORM1P02763 201 aa8.78□□□□□ -1
KCNIP3-206ENST00000475491 SYT8Q8NBV8 401 aa8.78□□□□□ -1
KCNIP3-206ENST00000475491 OR11H1Q8NG94 326 aa8.78□□□□□ -1
KCNIP3-206ENST00000475491 OR11H2Q8NH07 326 aa8.78□□□□□ -1
KCNIP3-206ENST00000475491 ZNF502Q8TBZ5 544 aa8.78□□□□□ -1
KCNIP3-206ENST00000475491 ZNF418Q8TF45 676 aaPredicted RBP8.78□□□□□ -1
KCNIP3-206ENST00000475491 APOMO95445 188 aa8.77□□□□□ -1
KCNIP3-206ENST00000475491 CT45A10P0DMU9 189 aa8.77□□□□□ -1
KCNIP3-206ENST00000475491 CSN1S1P47710 185 aa8.77□□□□□ -1
KCNIP3-206ENST00000475491 UFSP1Q6NVU6 142 aa8.77□□□□□ -1
KCNIP3-206ENST00000475491 SYNJ2BPP57105 145 aa8.77□□□□□ -1.01
KCNIP3-206ENST00000475491 Q86TA4 180 aa8.77□□□□□ -1.01
KCNIP3-206ENST00000475491 ZNF414Q96IQ9 312 aa8.77□□□□□ -1.01
KCNIP3-206ENST00000475491 RPP21Q9H633 154 aaKnown RBP8.77□□□□□ -1.01
KCNIP3-206ENST00000475491 NOTCH1P46531 2555 aa8.77□□□□□ -1.01
KCNIP3-206ENST00000475491 LOXL1Q08397 574 aaPredicted RBP8.77□□□□□ -1.01
KCNIP3-206ENST00000475491 TTC32Q5I0X7 151 aa8.77□□□□□ -1.01
KCNIP3-206ENST00000475491 SIGLEC15Q6ZMC9 328 aa8.77□□□□□ -1.01
KCNIP3-206ENST00000475491 SPXQ9BT56 116 aa8.77□□□□□ -1.01
KCNIP3-206ENST00000475491 ARMS2P0C7Q2 107 aa8.76□□□□□ -1.01
KCNIP3-206ENST00000475491 LINC00173Q6ZV60 143 aa8.76□□□□□ -1.01
KCNIP3-206ENST00000475491 NHP2Q9NX24 153 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms