RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 SLURP1P55000 103 aa11.56□□□□□ -0.56
RPUSD3-215ENST00000475470 SNRPD3P62318 126 aaKnown RBP11.56□□□□□ -0.56
RPUSD3-215ENST00000475470 PRELID3AQ96N28 172 aa11.56□□□□□ -0.56
RPUSD3-215ENST00000475470 U3KQK5 164 aa11.56□□□□□ -0.56
RPUSD3-215ENST00000475470 FLNAP21333 2647 aaKnown RBP11.56□□□□□ -0.56
RPUSD3-215ENST00000475470 LINC01619G3V211 115 aa11.55□□□□□ -0.56
RPUSD3-215ENST00000475470 PSMG4Q5JS54 123 aa11.55□□□□□ -0.56
RPUSD3-215ENST00000475470 DMRTA1Q5VZB9 504 aa11.55□□□□□ -0.56
RPUSD3-215ENST00000475470 PRSS3P2Q8NHM4 247 aa11.55□□□□□ -0.56
RPUSD3-215ENST00000475470 DPF1Q92782 380 aa11.55□□□□□ -0.56
RPUSD3-215ENST00000475470 IGHV1-24A0A0C4DH33 117 aa11.55□□□□□ -0.56
RPUSD3-215ENST00000475470 CKS2P33552 79 aa11.55□□□□□ -0.56
RPUSD3-215ENST00000475470 TCTEX1D4Q5JR98 221 aa11.55□□□□□ -0.56
RPUSD3-215ENST00000475470 OR11H1Q8NG94 326 aa11.55□□□□□ -0.56
RPUSD3-215ENST00000475470 C4orf3Q8WVX3 66 aa11.55□□□□□ -0.56
RPUSD3-215ENST00000475470 VAMP8Q9BV40 100 aa11.55□□□□□ -0.56
RPUSD3-215ENST00000475470 OR10AG1Q8NH19 301 aa11.54□□□□□ -0.56
RPUSD3-215ENST00000475470 ESM1Q9NQ30 184 aa11.54□□□□□ -0.56
RPUSD3-215ENST00000475470 K7EQG2 157 aa11.54□□□□□ -0.56
RPUSD3-215ENST00000475470 OR5AL1P0C617 328 aa11.54□□□□□ -0.56
RPUSD3-215ENST00000475470 FA2HQ7L5A8 372 aa11.54□□□□□ -0.56
RPUSD3-215ENST00000475470 Q8N976 141 aa11.54□□□□□ -0.56
RPUSD3-215ENST00000475470 SONP18583 2426 aaKnown RBP11.53□□□□□ -0.56
RPUSD3-215ENST00000475470 RAB4AP20338 218 aa11.53□□□□□ -0.56
RPUSD3-215ENST00000475470 SPANXN1Q5VSR9 72 aa11.53□□□□□ -0.56
RPUSD3-215ENST00000475470 EBLN2Q6P2I7 272 aa11.53□□□□□ -0.56
RPUSD3-215ENST00000475470 APRG1Q8IVJ8 170 aa11.53□□□□□ -0.56
RPUSD3-215ENST00000475470 OR1N2Q8NGR9 330 aa11.53□□□□□ -0.56
RPUSD3-215ENST00000475470 AP5S1Q9NUS5 200 aa11.53□□□□□ -0.56
RPUSD3-215ENST00000475470 LOC389332A0A1B0GUA5 103 aa11.52□□□□□ -0.56
RPUSD3-215ENST00000475470 H3BVH4 76 aa11.52□□□□□ -0.56
RPUSD3-215ENST00000475470 G0S2P27469 103 aa11.52□□□□□ -0.56
RPUSD3-215ENST00000475470 KIR3DS1Q14943 382 aa11.52□□□□□ -0.56
RPUSD3-215ENST00000475470 SMIM15Q7Z3B0 74 aa11.52□□□□□ -0.56
RPUSD3-215ENST00000475470 KLHL30-AS1Q8NEE0 82 aa11.52□□□□□ -0.56
RPUSD3-215ENST00000475470 TIMM8BQ9Y5J9 83 aaPredicted RBP11.52□□□□□ -0.56
RPUSD3-215ENST00000475470 SMKR1H3BMG3 65 aa11.52□□□□□ -0.57
RPUSD3-215ENST00000475470 SNAI2O43623 268 aa11.52□□□□□ -0.57
RPUSD3-215ENST00000475470 BTF3P20290 206 aaKnown RBP11.52□□□□□ -0.57
RPUSD3-215ENST00000475470 CACNG7P62955 275 aa11.52□□□□□ -0.57
RPUSD3-215ENST00000475470 RNF185Q96GF1 192 aa11.52□□□□□ -0.57
RPUSD3-215ENST00000475470 DUX3Q96PT4 197 aa11.52□□□□□ -0.57
RPUSD3-215ENST00000475470 C20orf144Q9BQM9 153 aa11.52□□□□□ -0.57
RPUSD3-215ENST00000475470 MIEN1Q9BRT3 115 aa11.52□□□□□ -0.57
RPUSD3-215ENST00000475470 LEPROTL1O95214 131 aa11.51□□□□□ -0.57
RPUSD3-215ENST00000475470 NCR2O95944 276 aa11.51□□□□□ -0.57
RPUSD3-215ENST00000475470 S100A4P26447 101 aaKnown RBP11.51□□□□□ -0.57
RPUSD3-215ENST00000475470 IFI27P40305 119 aaPredicted RBP11.51□□□□□ -0.57
RPUSD3-215ENST00000475470 ANXA2RQ3ZCQ2 193 aa11.51□□□□□ -0.57
RPUSD3-215ENST00000475470 PEMTQ9UBM1 199 aa11.51□□□□□ -0.57
RPUSD3-215ENST00000475470 PPBPP02775 128 aa11.51□□□□□ -0.57
RPUSD3-215ENST00000475470 ASIPP42127 132 aa11.51□□□□□ -0.57
RPUSD3-215ENST00000475470 ADAMTSL5Q6ZMM2 481 aa11.51□□□□□ -0.57
RPUSD3-215ENST00000475470 WFDC12Q8WWY7 111 aa11.51□□□□□ -0.57
RPUSD3-215ENST00000475470 SIGLEC8Q9NYZ4 499 aa11.51□□□□□ -0.57
RPUSD3-215ENST00000475470 KLLNB2CW77 178 aa11.5□□□□□ -0.57
RPUSD3-215ENST00000475470 SCGB2A2Q13296 93 aa11.5□□□□□ -0.57
RPUSD3-215ENST00000475470 ITPR2Q14571 2701 aa11.5□□□□□ -0.57
RPUSD3-215ENST00000475470 IGHV4-4A0A075B6R2 117 aa11.5□□□□□ -0.57
RPUSD3-215ENST00000475470 A0A0J9YX75 114 aa11.5□□□□□ -0.57
RPUSD3-215ENST00000475470 NPYP01303 97 aa11.5□□□□□ -0.57
RPUSD3-215ENST00000475470 EVI2AP22794 236 aa11.5□□□□□ -0.57
RPUSD3-215ENST00000475470 BATFQ16520 125 aa11.5□□□□□ -0.57
RPUSD3-215ENST00000475470 OR9G4Q8NGQ1 327 aa11.5□□□□□ -0.57
RPUSD3-215ENST00000475470 HIST2H2BDQ6DRA6 164 aa11.49□□□□□ -0.57
RPUSD3-215ENST00000475470 TMEM70Q9BUB7 260 aa11.49□□□□□ -0.57
RPUSD3-215ENST00000475470 LEPP41159 167 aa11.49□□□□□ -0.57
RPUSD3-215ENST00000475470 MYO9AB2RTY4 2548 aa11.49□□□□□ -0.57
RPUSD3-215ENST00000475470 TCF21O43680 179 aa11.48□□□□□ -0.57
RPUSD3-215ENST00000475470 IGKV3-20P01619 116 aa11.48□□□□□ -0.57
RPUSD3-215ENST00000475470 DLX4Q92988 240 aaPredicted RBP11.48□□□□□ -0.57
RPUSD3-215ENST00000475470 UNC79Q9P2D8 2635 aa11.48□□□□□ -0.57
RPUSD3-215ENST00000475470 GNRH2O43555 120 aa11.48□□□□□ -0.57
RPUSD3-215ENST00000475470 SPATA45Q537H7 98 aa11.48□□□□□ -0.57
RPUSD3-215ENST00000475470 LINC00173Q6ZV60 143 aa11.48□□□□□ -0.57
RPUSD3-215ENST00000475470 ATOH7Q8N100 152 aa11.48□□□□□ -0.57
RPUSD3-215ENST00000475470 ODF3Q96PU9 254 aa11.48□□□□□ -0.57
RPUSD3-215ENST00000475470 HSPB8Q9UJY1 196 aa11.48□□□□□ -0.57
RPUSD3-215ENST00000475470 LAMTOR2Q9Y2Q5 125 aa11.48□□□□□ -0.57
RPUSD3-215ENST00000475470 PHLDA3Q9Y5J5 127 aa11.48□□□□□ -0.57
RPUSD3-215ENST00000475470 M0R381 172 aa11.47□□□□□ -0.57
RPUSD3-215ENST00000475470 RNASE1P07998 156 aaKnown RBP11.47□□□□□ -0.57
RPUSD3-215ENST00000475470 FAM159AQ6UWV7 190 aa11.47□□□□□ -0.57
RPUSD3-215ENST00000475470 MAP1LC3AQ9H492 121 aa11.47□□□□□ -0.57
RPUSD3-215ENST00000475470 TRAV12-3A0A0B4J271 114 aa11.47□□□□□ -0.57
RPUSD3-215ENST00000475470 DUSP14O95147 198 aaKnown RBP11.47□□□□□ -0.57
RPUSD3-215ENST00000475470 C11orf44Q8N8P7 122 aa11.47□□□□□ -0.57
RPUSD3-215ENST00000475470 C7orf71A4D174 169 aa11.46□□□□□ -0.57
RPUSD3-215ENST00000475470 GAS8-AS1O95177 125 aa11.46□□□□□ -0.57
RPUSD3-215ENST00000475470 MED14OSP0DP75 135 aa11.46□□□□□ -0.57
RPUSD3-215ENST00000475470 ZNF25P17030 456 aaPredicted RBP11.46□□□□□ -0.57
RPUSD3-215ENST00000475470 MAP1LC3CQ9BXW4 147 aa11.46□□□□□ -0.57
RPUSD3-215ENST00000475470 SYS1-DBNDD2H3BUS1 97 aa11.46□□□□□ -0.58
RPUSD3-215ENST00000475470 SPRY2O43597 315 aa11.46□□□□□ -0.58
RPUSD3-215ENST00000475470 TNFRSF6BO95407 300 aa11.46□□□□□ -0.58
RPUSD3-215ENST00000475470 FOXI2Q6ZQN5 318 aa11.46□□□□□ -0.58
RPUSD3-215ENST00000475470 DYNLRB2Q8TF09 96 aa11.46□□□□□ -0.58
RPUSD3-215ENST00000475470 ZNF418Q8TF45 676 aaPredicted RBP11.46□□□□□ -0.58
RPUSD3-215ENST00000475470 ACANP16112 2415 aa11.46□□□□□ -0.58
RPUSD3-215ENST00000475470 A0A1W2PRX2 142 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms