RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 LENEPQ9Y5L5 61 aa13.57□□□□□ -0.24
VPS36-203ENST00000475375 TRAV6A0A075B6T7 132 aa13.56□□□□□ -0.24
VPS36-203ENST00000475375 UBE2L3P68036 154 aaKnown RBP13.56□□□□□ -0.24
VPS36-203ENST00000475375 TDRG1Q3Y452 100 aa13.56□□□□□ -0.24
VPS36-203ENST00000475375 LELP1Q5T871 98 aa13.56□□□□□ -0.24
VPS36-203ENST00000475375 SLC25A29Q8N8R3 303 aa13.56□□□□□ -0.24
VPS36-203ENST00000475375 HYLS1Q96M11 299 aa13.56□□□□□ -0.24
VPS36-203ENST00000475375 SDHCQ99643 169 aaPredicted RBP13.56□□□□□ -0.24
VPS36-203ENST00000475375 RPH3ALQ9UNE2 315 aa13.56□□□□□ -0.24
VPS36-203ENST00000475375 UBR4Q5T4S7 5183 aa13.56□□□□□ -0.24
VPS36-203ENST00000475375 DIRC3C9JPN6 131 aa13.55□□□□□ -0.24
VPS36-203ENST00000475375 IL7P13232 177 aa13.55□□□□□ -0.24
VPS36-203ENST00000475375 LAGE3Q14657 143 aa13.55□□□□□ -0.24
VPS36-203ENST00000475375 ATP5SQ99766 215 aa13.55□□□□□ -0.24
VPS36-203ENST00000475375 KCNIP2Q9NS61 270 aa13.55□□□□□ -0.24
VPS36-203ENST00000475375 LRP1Q07954 4544 aaKnown RBP13.55□□□□□ -0.24
VPS36-203ENST00000475375 IGHV3-73A0A0B4J1V6 119 aa13.54□□□□□ -0.24
VPS36-203ENST00000475375 TYMSP04818 313 aa13.54□□□□□ -0.24
VPS36-203ENST00000475375 NHLH2Q02577 135 aa13.54□□□□□ -0.24
VPS36-203ENST00000475375 RHOHQ15669 191 aa13.54□□□□□ -0.24
VPS36-203ENST00000475375 LINC01620Q4KN68 170 aa13.54□□□□□ -0.24
VPS36-203ENST00000475375 OR5C1Q8NGR4 320 aa13.54□□□□□ -0.24
VPS36-203ENST00000475375 SDF2L1Q9HCN8 221 aa13.54□□□□□ -0.24
VPS36-203ENST00000475375 TRAV21A0A0B4J279 112 aa13.53□□□□□ -0.24
VPS36-203ENST00000475375 TCRBP04435 133 aa13.53□□□□□ -0.24
VPS36-203ENST00000475375 SCXQ7RTU7 201 aa13.53□□□□□ -0.24
VPS36-203ENST00000475375 NUDT15Q9NV35 164 aa13.53□□□□□ -0.24
VPS36-203ENST00000475375 PLA2G2DQ9UNK4 145 aa13.53□□□□□ -0.24
VPS36-203ENST00000475375 F6UZH7 168 aa13.52□□□□□ -0.25
VPS36-203ENST00000475375 ZNF876PQ49A33 203 aa13.52□□□□□ -0.25
VPS36-203ENST00000475375 ATP6V0E2Q8NHE4 81 aa13.52□□□□□ -0.25
VPS36-203ENST00000475375 CMTM2Q8TAZ6 248 aa13.52□□□□□ -0.25
VPS36-203ENST00000475375 GTSF1LQ9H1H1 148 aa13.52□□□□□ -0.25
VPS36-203ENST00000475375 TRAV8-3A0A0A6YYJ7 113 aa13.51□□□□□ -0.25
VPS36-203ENST00000475375 LYRM1O43325 122 aa13.51□□□□□ -0.25
VPS36-203ENST00000475375 IL15RAQ13261 267 aa13.51□□□□□ -0.25
VPS36-203ENST00000475375 Q8N3U1 123 aa13.51□□□□□ -0.25
VPS36-203ENST00000475375 TMED6Q8WW62 240 aa13.51□□□□□ -0.25
VPS36-203ENST00000475375 ASB13Q8WXK3 278 aa13.51□□□□□ -0.25
VPS36-203ENST00000475375 KCNS1Q96KK3 526 aa13.51□□□□□ -0.25
VPS36-203ENST00000475375 NMES1Q9C002 83 aa13.51□□□□□ -0.25
VPS36-203ENST00000475375 TRBV6-4A0A1B0GX49 114 aa13.5□□□□□ -0.25
VPS36-203ENST00000475375 C17orf112F2Z3M2 114 aa13.5□□□□□ -0.25
VPS36-203ENST00000475375 CFAP126Q5VTH2 177 aa13.5□□□□□ -0.25
VPS36-203ENST00000475375 RBFOX3A6NFN3 312 aa13.49□□□□□ -0.25
VPS36-203ENST00000475375 PLA2G10O15496 165 aa13.49□□□□□ -0.25
VPS36-203ENST00000475375 OXTP01178 125 aa13.49□□□□□ -0.25
VPS36-203ENST00000475375 KHDC3LQ587J8 217 aa13.49□□□□□ -0.25
VPS36-203ENST00000475375 GOLT1AQ6ZVE7 132 aa13.49□□□□□ -0.25
VPS36-203ENST00000475375 BAALCQ8WXS3 180 aa13.49□□□□□ -0.25
VPS36-203ENST00000475375 WDR61Q9GZS3 305 aaKnown RBP13.49□□□□□ -0.25
VPS36-203ENST00000475375 TREM1Q9NP99 234 aa13.49□□□□□ -0.25
VPS36-203ENST00000475375 RS1O15537 224 aa13.48□□□□□ -0.25
VPS36-203ENST00000475375 CIDEAO60543 219 aa13.48□□□□□ -0.25
VPS36-203ENST00000475375 FAM74A1Q5RGS3 127 aa13.48□□□□□ -0.25
VPS36-203ENST00000475375 OTORQ9NRC9 128 aa13.48□□□□□ -0.25
VPS36-203ENST00000475375 PGPA6NDG6 321 aa13.47□□□□□ -0.25
VPS36-203ENST00000475375 TAS2R45P59539 299 aa13.47□□□□□ -0.25
VPS36-203ENST00000475375 TOR2AQ5JU69 321 aa13.47□□□□□ -0.25
VPS36-203ENST00000475375 FFAR4Q5NUL3 377 aa13.47□□□□□ -0.25
VPS36-203ENST00000475375 DPPA3Q6W0C5 159 aa13.47□□□□□ -0.25
VPS36-203ENST00000475375 DAZ4Q86SG3 579 aaKnown RBP13.47□□□□□ -0.25
VPS36-203ENST00000475375 CHAC1Q9BUX1 264 aa13.47□□□□□ -0.25
VPS36-203ENST00000475375 DAZ3Q9NR90 486 aaKnown RBP13.47□□□□□ -0.25
VPS36-203ENST00000475375 TRAV8-1A0A0A6YYK1 113 aa13.46□□□□□ -0.25
VPS36-203ENST00000475375 GGTLC3B5MD39 225 aa13.46□□□□□ -0.25
VPS36-203ENST00000475375 H2AFB2P0C5Z0 115 aa13.46□□□□□ -0.25
VPS36-203ENST00000475375 TVP23CQ96ET8 276 aa13.46□□□□□ -0.25
VPS36-203ENST00000475375 FAT3Q8TDW7 4589 aa13.45□□□□□ -0.26
VPS36-203ENST00000475375 EIF3GO75821 320 aaKnown RBP eCLIP13.45□□□□□ -0.26
VPS36-203ENST00000475375 MGST1P10620 155 aaKnown RBP13.45□□□□□ -0.26
VPS36-203ENST00000475375 LRRC37A5PQ49AS3 106 aa13.45□□□□□ -0.26
VPS36-203ENST00000475375 RBM38Q9H0Z9 239 aaKnown RBP13.45□□□□□ -0.26
VPS36-203ENST00000475375 SH3BGRL3Q9H299 93 aa13.45□□□□□ -0.26
VPS36-203ENST00000475375 MBD2Q9UBB5 411 aa13.45□□□□□ -0.26
VPS36-203ENST00000475375 COX11Q9Y6N1 276 aa13.45□□□□□ -0.26
VPS36-203ENST00000475375 RMI2Q96E14 147 aa13.44□□□□□ -0.26
VPS36-203ENST00000475375 OR5AC2Q9NZP5 309 aa13.44□□□□□ -0.26
VPS36-203ENST00000475375 GAGE12JA6NER3 117 aa13.43□□□□□ -0.26
VPS36-203ENST00000475375 KRTAP10-4P60372 401 aaPredicted RBP13.43□□□□□ -0.26
VPS36-203ENST00000475375 GAGE1Q13065 139 aa13.43□□□□□ -0.26
VPS36-203ENST00000475375 GAGE4Q13068 117 aa13.43□□□□□ -0.26
VPS36-203ENST00000475375 GAGE5Q13069 117 aa13.43□□□□□ -0.26
VPS36-203ENST00000475375 ASAH1Q13510 395 aa13.43□□□□□ -0.26
VPS36-203ENST00000475375 GAGE13Q4V321 117 aa13.43□□□□□ -0.26
VPS36-203ENST00000475375 ZNF506Q5JVG8 444 aa13.43□□□□□ -0.26
VPS36-203ENST00000475375 Q8N976 141 aa13.43□□□□□ -0.26
VPS36-203ENST00000475375 CIRBP-AS1Q8TBR5 109 aa13.43□□□□□ -0.26
VPS36-203ENST00000475375 NDFIP1Q9BT67 221 aa13.43□□□□□ -0.26
VPS36-203ENST00000475375 GNG5P63218 68 aa13.42□□□□□ -0.26
VPS36-203ENST00000475375 SGK494Q96LW2 274 aa13.42□□□□□ -0.26
VPS36-203ENST00000475375 IGKV2D-24A0A075B6R9 120 aa13.41□□□□□ -0.26
VPS36-203ENST00000475375 PGPEP1LA6NFU8 196 aa13.41□□□□□ -0.26
VPS36-203ENST00000475375 SIX6O95475 246 aa13.41□□□□□ -0.26
VPS36-203ENST00000475375 ACOT6Q3I5F7 207 aaPredicted RBP13.41□□□□□ -0.26
VPS36-203ENST00000475375 URGCP-MRPS24S4R325 110 aa13.41□□□□□ -0.26
VPS36-203ENST00000475375 SCGB1C1Q8TD33 95 aa13.4□□□□□ -0.26
VPS36-203ENST00000475375 C9orf85Q96MD7 179 aa13.4□□□□□ -0.26
VPS36-203ENST00000475375 C11orf21Q9P2W6 132 aa13.4□□□□□ -0.26
VPS36-203ENST00000475375 FAM240BA0A1B0GVZ2 78 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms