RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 K7EM74 188 aa8.68□□□□□ -1.02
VAPB-204ENST00000475243 ARTNQ5T4W7 220 aa8.68□□□□□ -1.02
VAPB-204ENST00000475243 EREGO14944 169 aa8.68□□□□□ -1.02
VAPB-204ENST00000475243 Q0VG73 95 aa8.68□□□□□ -1.02
VAPB-204ENST00000475243 FOXE3Q13461 319 aa8.68□□□□□ -1.02
VAPB-204ENST00000475243 RSPO3Q9BXY4 272 aaPredicted RBP8.68□□□□□ -1.02
VAPB-204ENST00000475243 MRPL35Q9NZE8 188 aaKnown RBP8.68□□□□□ -1.02
VAPB-204ENST00000475243 V9GYV3 84 aa8.68□□□□□ -1.02
VAPB-204ENST00000475243 IGLV1-44P01699 117 aa8.67□□□□□ -1.02
VAPB-204ENST00000475243 SPRNQ5BIV9 151 aa8.67□□□□□ -1.02
VAPB-204ENST00000475243 DSCR8Q96T75 97 aa8.67□□□□□ -1.02
VAPB-204ENST00000475243 SONP18583 2426 aaKnown RBP8.67□□□□□ -1.02
VAPB-204ENST00000475243 A8MWP6 167 aa8.67□□□□□ -1.02
VAPB-204ENST00000475243 J3QLI3 93 aa8.67□□□□□ -1.02
VAPB-204ENST00000475243 FXYD5Q96DB9 178 aa8.67□□□□□ -1.02
VAPB-204ENST00000475243 NDUFA12Q9UI09 145 aa8.67□□□□□ -1.02
VAPB-204ENST00000475243 hADV29S1A0JD25 119 aa8.67□□□□□ -1.02
VAPB-204ENST00000475243 U3KQE9 123 aa8.67□□□□□ -1.02
VAPB-204ENST00000475243 SMIM27A0A1W2PRY6 76 aa8.67□□□□□ -1.02
VAPB-204ENST00000475243 PLA2G2CQ5R387 149 aa8.67□□□□□ -1.02
VAPB-204ENST00000475243 TINCRA0A1B0GVN0 87 aa8.67□□□□□ -1.02
VAPB-204ENST00000475243 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.67□□□□□ -1.02
VAPB-204ENST00000475243 IGKV2-29A2NJV5 120 aaPredicted RBP8.67□□□□□ -1.02
VAPB-204ENST00000475243 C22orf46C9J442 243 aa8.67□□□□□ -1.02
VAPB-204ENST00000475243 IGHV4-4A0A075B6R2 117 aa8.66□□□□□ -1.02
VAPB-204ENST00000475243 NPYP01303 97 aa8.66□□□□□ -1.02
VAPB-204ENST00000475243 DKK4Q9UBT3 224 aa8.66□□□□□ -1.02
VAPB-204ENST00000475243 TSSC4Q9Y5U2 329 aaPredicted RBP8.66□□□□□ -1.02
VAPB-204ENST00000475243 IGLC1P0CG04 106 aa8.66□□□□□ -1.02
VAPB-204ENST00000475243 KIAA1549LQ6ZVL6 1849 aa8.66□□□□□ -1.02
VAPB-204ENST00000475243 NRGNQ92686 78 aa8.66□□□□□ -1.02
VAPB-204ENST00000475243 MRPL53Q96EL3 112 aaKnown RBP8.66□□□□□ -1.02
VAPB-204ENST00000475243 RS1O15537 224 aa8.66□□□□□ -1.02
VAPB-204ENST00000475243 SLURP1P55000 103 aa8.66□□□□□ -1.02
VAPB-204ENST00000475243 K7ERJ3 54 aa8.66□□□□□ -1.02
VAPB-204ENST00000475243 C1orf147Q96MC9 270 aaPredicted RBP8.66□□□□□ -1.02
VAPB-204ENST00000475243 IGHV2-5P01817 119 aa8.65□□□□□ -1.02
VAPB-204ENST00000475243 DYNAPQ8N1N2 210 aa8.65□□□□□ -1.02
VAPB-204ENST00000475243 NDUFS5O43920 106 aa8.65□□□□□ -1.02
VAPB-204ENST00000475243 CRLF1O75462 422 aa8.65□□□□□ -1.02
VAPB-204ENST00000475243 UBE2BP63146 152 aa8.65□□□□□ -1.02
VAPB-204ENST00000475243 LINC00311Q8N616 119 aa8.65□□□□□ -1.02
VAPB-204ENST00000475243 SHISA9B4DS77 424 aa8.65□□□□□ -1.03
VAPB-204ENST00000475243 CT83Q5H943 113 aa8.65□□□□□ -1.03
VAPB-204ENST00000475243 Q6ZWC4 215 aa8.65□□□□□ -1.03
VAPB-204ENST00000475243 CFHR4Q92496 578 aa8.64□□□□□ -1.03
VAPB-204ENST00000475243 ESM1Q9NQ30 184 aa8.64□□□□□ -1.03
VAPB-204ENST00000475243 TMEM14CQ9P0S9 112 aa8.64□□□□□ -1.03
VAPB-204ENST00000475243 DKK2Q9UBU2 259 aa8.64□□□□□ -1.03
VAPB-204ENST00000475243 IGHV4-38-2P0DP08 117 aa8.64□□□□□ -1.03
VAPB-204ENST00000475243 WT1P19544 449 aaPredicted RBP8.64□□□□□ -1.03
VAPB-204ENST00000475243 ZNF491Q8N8L2 437 aa8.64□□□□□ -1.03
VAPB-204ENST00000475243 VPREB3Q9UKI3 123 aa8.64□□□□□ -1.03
VAPB-204ENST00000475243 EGR2P11161 476 aaPredicted RBP8.63□□□□□ -1.03
VAPB-204ENST00000475243 TNRC6BQ9UPQ9 1833 aaKnown RBP8.63□□□□□ -1.03
VAPB-204ENST00000475243 CEND1Q8N111 149 aa8.63□□□□□ -1.03
VAPB-204ENST00000475243 RITA1Q96K30 269 aa8.63□□□□□ -1.03
VAPB-204ENST00000475243 SMIM2Q9BVW6 85 aa8.63□□□□□ -1.03
VAPB-204ENST00000475243 CTSZQ9UBR2 303 aa8.63□□□□□ -1.03
VAPB-204ENST00000475243 C9orf153Q5TBE3 101 aa8.63□□□□□ -1.03
VAPB-204ENST00000475243 UBL5Q9BZL1 73 aa8.63□□□□□ -1.03
VAPB-204ENST00000475243 CRYGCP07315 174 aa8.63□□□□□ -1.03
VAPB-204ENST00000475243 IGLV10-54A0A075B6I4 117 aa8.63□□□□□ -1.03
VAPB-204ENST00000475243 IGLL1P15814 213 aa8.63□□□□□ -1.03
VAPB-204ENST00000475243 RPL18AQ02543 176 aaKnown RBP8.63□□□□□ -1.03
VAPB-204ENST00000475243 C5orf38Q86SI9 138 aa8.63□□□□□ -1.03
VAPB-204ENST00000475243 PRSS33Q8NF86 280 aa8.63□□□□□ -1.03
VAPB-204ENST00000475243 RMI2Q96E14 147 aa8.63□□□□□ -1.03
VAPB-204ENST00000475243 C9orf118A6NHY6 69 aa8.62□□□□□ -1.03
VAPB-204ENST00000475243 F8VRH5 84 aa8.62□□□□□ -1.03
VAPB-204ENST00000475243 BUB3O43684 328 aa8.62□□□□□ -1.03
VAPB-204ENST00000475243 IGHG4P01861 327 aa8.62□□□□□ -1.03
VAPB-204ENST00000475243 IGHV4-30-2A0A087WSY4 118 aa8.62□□□□□ -1.03
VAPB-204ENST00000475243 PRO1854Q9UHT4 67 aa8.62□□□□□ -1.03
VAPB-204ENST00000475243 HERVK_113P63121 156 aa8.62□□□□□ -1.03
VAPB-204ENST00000475243 ELANEP08246 267 aa8.62□□□□□ -1.03
VAPB-204ENST00000475243 BLCAPP62952 87 aa8.62□□□□□ -1.03
VAPB-204ENST00000475243 TRBV20-1A0A075B6N2 111 aa8.62□□□□□ -1.03
VAPB-204ENST00000475243 K7EN84 100 aa8.62□□□□□ -1.03
VAPB-204ENST00000475243 MAJINQ3KP22 176 aa8.62□□□□□ -1.03
VAPB-204ENST00000475243 J3QQQ9 107 aa8.62□□□□□ -1.03
VAPB-204ENST00000475243 H3BMG7 143 aa8.61□□□□□ -1.03
VAPB-204ENST00000475243 IGHV4-61A0A0C4DH41 118 aa8.61□□□□□ -1.03
VAPB-204ENST00000475243 ETV2O00321 342 aaPredicted RBP8.61□□□□□ -1.03
VAPB-204ENST00000475243 COX8AP10176 69 aa8.61□□□□□ -1.03
VAPB-204ENST00000475243 CFPP27918 469 aa8.61□□□□□ -1.03
VAPB-204ENST00000475243 GATA1P15976 413 aaPredicted RBP8.61□□□□□ -1.03
VAPB-204ENST00000475243 ETDBQ3ZM63 59 aa8.61□□□□□ -1.03
VAPB-204ENST00000475243 FOXI2Q6ZQN5 318 aa8.61□□□□□ -1.03
VAPB-204ENST00000475243 CSPG4Q6UVK1 2322 aa8.61□□□□□ -1.03
VAPB-204ENST00000475243 IGHV2-70P01814 119 aa8.61□□□□□ -1.03
VAPB-204ENST00000475243 INAFM2P0DMQ5 153 aa8.61□□□□□ -1.03
VAPB-204ENST00000475243 PIP4P1Q86T03 277 aa8.61□□□□□ -1.03
VAPB-204ENST00000475243 ARHGAP32A7KAX9 2087 aa8.61□□□□□ -1.03
VAPB-204ENST00000475243 TRAV13-2A0A0B4J235 113 aa8.61□□□□□ -1.03
VAPB-204ENST00000475243 LGALS9BQ3B8N2 356 aa8.61□□□□□ -1.03
VAPB-204ENST00000475243 LGALS9CQ6DKI2 356 aa8.61□□□□□ -1.03
VAPB-204ENST00000475243 IGLC7A0M8Q6 106 aa8.6□□□□□ -1.03
VAPB-204ENST00000475243 DEFB113Q30KQ7 82 aa8.6□□□□□ -1.03
VAPB-204ENST00000475243 RHOHQ15669 191 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms