RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 NFE4Q86UQ8 179 aa4.81□□□□□ -1.64
VPS50-211ENST00000474412 MRPL53Q96EL3 112 aaKnown RBP4.81□□□□□ -1.64
VPS50-211ENST00000474412 ODF3Q96PU9 254 aa4.81□□□□□ -1.64
VPS50-211ENST00000474412 PAXXQ9BUH6 204 aa4.81□□□□□ -1.64
VPS50-211ENST00000474412 SLC25A31Q9H0C2 315 aa4.81□□□□□ -1.64
VPS50-211ENST00000474412 OR51M1Q9H341 326 aa4.81□□□□□ -1.64
VPS50-211ENST00000474412 GSN-AS1Q9NRJ2 163 aa4.81□□□□□ -1.64
VPS50-211ENST00000474412 FUT9Q9Y231 359 aa4.81□□□□□ -1.64
VPS50-211ENST00000474412 TIMM8BQ9Y5J9 83 aaPredicted RBP4.81□□□□□ -1.64
VPS50-211ENST00000474412 PKHD1P08F94 4074 aa4.81□□□□□ -1.64
VPS50-211ENST00000474412 HERC2O95714 4834 aa4.81□□□□□ -1.64
VPS50-211ENST00000474412 SNURFLB1AK76 121 aa4.8□□□□□ -1.64
VPS50-211ENST00000474412 ATP5G1P05496 136 aa4.8□□□□□ -1.64
VPS50-211ENST00000474412 NBEAP1P0C6P0 100 aa4.8□□□□□ -1.64
VPS50-211ENST00000474412 RPL12P30050 165 aaKnown RBP4.8□□□□□ -1.64
VPS50-211ENST00000474412 LEPP41159 167 aa4.8□□□□□ -1.64
VPS50-211ENST00000474412 ATP5G3P48201 142 aa4.8□□□□□ -1.64
VPS50-211ENST00000474412 DEFA1P59665 94 aa4.8□□□□□ -1.64
VPS50-211ENST00000474412 DEFA3P59666 94 aa4.8□□□□□ -1.64
VPS50-211ENST00000474412 GNG5P63218 68 aa4.8□□□□□ -1.64
VPS50-211ENST00000474412 PDE6HQ13956 83 aa4.8□□□□□ -1.64
VPS50-211ENST00000474412 Q5BKY6 102 aa4.8□□□□□ -1.64
VPS50-211ENST00000474412 ZNRF2Q8NHG8 242 aa4.8□□□□□ -1.64
VPS50-211ENST00000474412 C20orf144Q9BQM9 153 aa4.8□□□□□ -1.64
VPS50-211ENST00000474412 MRPL32Q9BYC8 188 aaKnown RBP4.8□□□□□ -1.64
VPS50-211ENST00000474412 Q9H3A6 140 aa4.8□□□□□ -1.64
VPS50-211ENST00000474412 MRPL16Q9NX20 251 aaKnown RBP4.8□□□□□ -1.64
VPS50-211ENST00000474412 RPH3ALQ9UNE2 315 aa4.8□□□□□ -1.64
VPS50-211ENST00000474412 RNF24Q9Y225 148 aa4.8□□□□□ -1.64
VPS50-211ENST00000474412 LINC00588Q9Y4M8 146 aa4.8□□□□□ -1.64
VPS50-211ENST00000474412 KLF12Q9Y4X4 402 aa4.8□□□□□ -1.64
VPS50-211ENST00000474412 TIMM9Q9Y5J7 89 aa4.8□□□□□ -1.64
VPS50-211ENST00000474412 DYNC1H1Q14204 4646 aaKnown RBP4.8□□□□□ -1.64
VPS50-211ENST00000474412 TRAV26-1A0A087WT03 109 aa4.79□□□□□ -1.64
VPS50-211ENST00000474412 TRAV8-1A0A0A6YYK1 113 aa4.79□□□□□ -1.64
VPS50-211ENST00000474412 F6UZH7 168 aa4.79□□□□□ -1.64
VPS50-211ENST00000474412 ZNF324O75467 553 aaPredicted RBP4.79□□□□□ -1.64
VPS50-211ENST00000474412 IGHV3-53P01767 116 aa4.79□□□□□ -1.64
VPS50-211ENST00000474412 RLN2P04090 185 aa4.79□□□□□ -1.64
VPS50-211ENST00000474412 SLC25A5P05141 298 aaKnown RBP4.79□□□□□ -1.64
VPS50-211ENST00000474412 PRSS1P07477 247 aa4.79□□□□□ -1.64
VPS50-211ENST00000474412 CRISP2P16562 243 aa4.79□□□□□ -1.64
VPS50-211ENST00000474412 RNASE4P34096 147 aaKnown RBP4.79□□□□□ -1.64
VPS50-211ENST00000474412 CYCSP99999 105 aaKnown RBP4.79□□□□□ -1.64
VPS50-211ENST00000474412 LGALS9BQ3B8N2 356 aa4.79□□□□□ -1.64
VPS50-211ENST00000474412 MUC21Q5SSG8 566 aa4.79□□□□□ -1.64
VPS50-211ENST00000474412 ZNF493Q6ZR52 646 aa4.79□□□□□ -1.64
VPS50-211ENST00000474412 SSX7Q7RTT5 188 aa4.79□□□□□ -1.64
VPS50-211ENST00000474412 C15orf53Q8NAA6 179 aa4.79□□□□□ -1.64
VPS50-211ENST00000474412 HSD17B11Q8NBQ5 300 aa4.79□□□□□ -1.64
VPS50-211ENST00000474412 FAM210BQ96KR6 192 aa4.79□□□□□ -1.64
VPS50-211ENST00000474412 PYGO2Q9BRQ0 406 aa4.79□□□□□ -1.64
VPS50-211ENST00000474412 SH3BGRL3Q9H299 93 aa4.79□□□□□ -1.64
VPS50-211ENST00000474412 ZNF492Q9P255 531 aa4.79□□□□□ -1.64
VPS50-211ENST00000474412 PRELID1Q9Y255 219 aa4.79□□□□□ -1.64
VPS50-211ENST00000474412 DNAH11Q96DT5 4516 aa4.78□□□□□ -1.64
VPS50-211ENST00000474412 TRGV1A0A0A0MS02 117 aa4.78□□□□□ -1.64
VPS50-211ENST00000474412 C17orf112F2Z3M2 114 aa4.78□□□□□ -1.64
VPS50-211ENST00000474412 G3V3Q6 166 aa4.78□□□□□ -1.64
VPS50-211ENST00000474412 PET100P0DJ07 73 aa4.78□□□□□ -1.64
VPS50-211ENST00000474412 TCL1AP56279 114 aa4.78□□□□□ -1.64
VPS50-211ENST00000474412 RANP62826 216 aaKnown RBP4.78□□□□□ -1.64
VPS50-211ENST00000474412 OR5I1Q13606 314 aa4.78□□□□□ -1.64
VPS50-211ENST00000474412 RNF212Q495C1 297 aa4.78□□□□□ -1.64
VPS50-211ENST00000474412 KHDC3LQ587J8 217 aa4.78□□□□□ -1.64
VPS50-211ENST00000474412 EIF4E3Q8N5X7 224 aaKnown RBP4.78□□□□□ -1.64
VPS50-211ENST00000474412 VSIG2Q96IQ7 327 aa4.78□□□□□ -1.64
VPS50-211ENST00000474412 ATG101Q9BSB4 218 aa4.78□□□□□ -1.64
VPS50-211ENST00000474412 KCNIP2Q9NS61 270 aa4.78□□□□□ -1.64
VPS50-211ENST00000474412 IGHV1OR15-1A0A075B7D0 117 aa4.77□□□□□ -1.65
VPS50-211ENST00000474412 RNF222A6NCQ9 220 aa4.77□□□□□ -1.65
VPS50-211ENST00000474412 PTTG1O95997 202 aa4.77□□□□□ -1.65
VPS50-211ENST00000474412 GPX1P07203 203 aa4.77□□□□□ -1.65
VPS50-211ENST00000474412 ARL14EPLP0DKL9 152 aa4.77□□□□□ -1.65
VPS50-211ENST00000474412 ZNF138P52744 262 aa4.77□□□□□ -1.65
VPS50-211ENST00000474412 TMEM78Q5T7P6 136 aa4.77□□□□□ -1.65
VPS50-211ENST00000474412 LINC00336Q6ZUF6 198 aa4.77□□□□□ -1.65
VPS50-211ENST00000474412 GNPNAT1Q96EK6 184 aaPredicted RBP4.77□□□□□ -1.65
VPS50-211ENST00000474412 TVP23CQ96ET8 276 aa4.77□□□□□ -1.65
VPS50-211ENST00000474412 SGK494Q96LW2 274 aa4.77□□□□□ -1.65
VPS50-211ENST00000474412 HYLS1Q96M11 299 aa4.77□□□□□ -1.65
VPS50-211ENST00000474412 LINC00477Q96M19 166 aa4.77□□□□□ -1.65
VPS50-211ENST00000474412 BATF3Q9NR55 127 aa4.77□□□□□ -1.65
VPS50-211ENST00000474412 A0A096LPF7 62 aa4.76□□□□□ -1.65
VPS50-211ENST00000474412 NBDYA0A0U1RRE5 68 aa4.76□□□□□ -1.65
VPS50-211ENST00000474412 SPINK4O60575 86 aa4.76□□□□□ -1.65
VPS50-211ENST00000474412 IFNA5P01569 189 aa4.76□□□□□ -1.65
VPS50-211ENST00000474412 SFTA3P0C7M3 94 aa4.76□□□□□ -1.65
VPS50-211ENST00000474412 M6PRP20645 277 aa4.76□□□□□ -1.65
VPS50-211ENST00000474412 ATP6V0CP27449 155 aa4.76□□□□□ -1.65
VPS50-211ENST00000474412 CDC34P49427 236 aaPredicted RBP4.76□□□□□ -1.65
VPS50-211ENST00000474412 DAZ2Q13117 558 aaKnown RBP4.76□□□□□ -1.65
VPS50-211ENST00000474412 ESRGQ1W209 222 aa4.76□□□□□ -1.65
VPS50-211ENST00000474412 GOLT1AQ6ZVE7 132 aa4.76□□□□□ -1.65
VPS50-211ENST00000474412 TMEM75Q8N9X5 138 aa4.76□□□□□ -1.65
VPS50-211ENST00000474412 ZNF680Q8NEM1 530 aa4.76□□□□□ -1.65
VPS50-211ENST00000474412 SCGB1C1Q8TD33 95 aa4.76□□□□□ -1.65
VPS50-211ENST00000474412 RXFP4Q8TDU9 374 aa4.76□□□□□ -1.65
VPS50-211ENST00000474412 AQP10Q96PS8 301 aa4.76□□□□□ -1.65
VPS50-211ENST00000474412 LINC00467Q9BRT7 94 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms