RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 ZNF706Q9Y5V0 76 aaPredicted RBP2.5□□□□□ -2.01
BRCA1-212ENST00000473961 LINC00312Q9Y6C7 94 aa2.5□□□□□ -2.01
BRCA1-212ENST00000473961 V9GYV3 84 aa2.5□□□□□ -2.01
BRCA1-212ENST00000473961 DOCK3Q8IZD9 2030 aa2.5□□□□□ -2.01
BRCA1-212ENST00000473961 EML5Q05BV3 1969 aa2.49□□□□□ -2.01
BRCA1-212ENST00000473961 BPTFQ12830 3046 aa2.49□□□□□ -2.01
BRCA1-212ENST00000473961 IGKV1D-42A0A075B6H8 117 aa2.49□□□□□ -2.01
BRCA1-212ENST00000473961 SMIM27A0A1W2PRY6 76 aa2.49□□□□□ -2.01
BRCA1-212ENST00000473961 FABP5P3A8MUU1 101 aa2.49□□□□□ -2.01
BRCA1-212ENST00000473961 IGLL5B9A064 214 aa2.49□□□□□ -2.01
BRCA1-212ENST00000473961 LEPROTL1O95214 131 aa2.49□□□□□ -2.01
BRCA1-212ENST00000473961 NAPSAO96009 420 aa2.49□□□□□ -2.01
BRCA1-212ENST00000473961 IGKV1D-33P01593 117 aa2.49□□□□□ -2.01
BRCA1-212ENST00000473961 IGKV1-33P01594 117 aa2.49□□□□□ -2.01
BRCA1-212ENST00000473961 IGHV3-7P01780 117 aa2.49□□□□□ -2.01
BRCA1-212ENST00000473961 IGHMP01871 453 aa2.49□□□□□ -2.01
BRCA1-212ENST00000473961 CCL1P22362 96 aa2.49□□□□□ -2.01
BRCA1-212ENST00000473961 RPS27P42677 84 aaKnown RBP2.49□□□□□ -2.01
BRCA1-212ENST00000473961 TCTAP57738 103 aa2.49□□□□□ -2.01
BRCA1-212ENST00000473961 FXYD4P59646 89 aa2.49□□□□□ -2.01
BRCA1-212ENST00000473961 KRTAP12-2P59991 146 aa2.49□□□□□ -2.01
BRCA1-212ENST00000473961 SLC38A11Q08AI6 406 aa2.49□□□□□ -2.01
BRCA1-212ENST00000473961 LINC01545Q5VT33 79 aa2.49□□□□□ -2.01
BRCA1-212ENST00000473961 Q6ZUT4 128 aa2.49□□□□□ -2.01
BRCA1-212ENST00000473961 OOSP2Q86WS3 158 aa2.49□□□□□ -2.01
BRCA1-212ENST00000473961 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.49□□□□□ -2.01
BRCA1-212ENST00000473961 ITLN2Q8WWU7 325 aaPredicted RBP2.49□□□□□ -2.01
BRCA1-212ENST00000473961 H1FXQ92522 213 aaKnown RBP2.49□□□□□ -2.01
BRCA1-212ENST00000473961 TMEM147Q9BVK8 224 aa2.49□□□□□ -2.01
BRCA1-212ENST00000473961 AICDAQ9GZX7 198 aa2.49□□□□□ -2.01
BRCA1-212ENST00000473961 LINC00574Q9H8X3 128 aa2.49□□□□□ -2.01
BRCA1-212ENST00000473961 RBM12B-AS1Q9P1G2 102 aa2.49□□□□□ -2.01
BRCA1-212ENST00000473961 VPREB3Q9UKI3 123 aa2.49□□□□□ -2.01
BRCA1-212ENST00000473961 LHFPL6Q9Y693 200 aa2.49□□□□□ -2.01
BRCA1-212ENST00000473961 KMT2EQ8IZD2 1858 aa2.49□□□□□ -2.01
BRCA1-212ENST00000473961 FANCMQ8IYD8 2048 aa2.49□□□□□ -2.01
BRCA1-212ENST00000473961 ATG2AQ2TAZ0 1938 aa2.48□□□□□ -2.01
BRCA1-212ENST00000473961 TRAV36DV7A0A075B6V5 113 aa2.48□□□□□ -2.01
BRCA1-212ENST00000473961 IGHV1-45A0A0A0MS14 117 aa2.48□□□□□ -2.01
BRCA1-212ENST00000473961 TEX50A0A1B0GTY4 177 aa2.48□□□□□ -2.01
BRCA1-212ENST00000473961 C17orf51A8MQB3 221 aa2.48□□□□□ -2.01
BRCA1-212ENST00000473961 H3BMG7 143 aa2.48□□□□□ -2.01
BRCA1-212ENST00000473961 HMGB3O15347 200 aaKnown RBP2.48□□□□□ -2.01
BRCA1-212ENST00000473961 PPYP01298 95 aa2.48□□□□□ -2.01
BRCA1-212ENST00000473961 FGF6P10767 208 aa2.48□□□□□ -2.01
BRCA1-212ENST00000473961 CTLA4P16410 223 aa2.48□□□□□ -2.01
BRCA1-212ENST00000473961 EVI2AP22794 236 aa2.48□□□□□ -2.01
BRCA1-212ENST00000473961 G6PCP35575 357 aa2.48□□□□□ -2.01
BRCA1-212ENST00000473961 TAS2R45P59539 299 aa2.48□□□□□ -2.01
BRCA1-212ENST00000473961 CATR1Q13166 79 aa2.48□□□□□ -2.01
BRCA1-212ENST00000473961 WFDC2Q14508 124 aa2.48□□□□□ -2.01
BRCA1-212ENST00000473961 KISS1Q15726 138 aa2.48□□□□□ -2.01
BRCA1-212ENST00000473961 ETDBQ3ZM63 59 aa2.48□□□□□ -2.01
BRCA1-212ENST00000473961 Q6AWC8 147 aa2.48□□□□□ -2.01
BRCA1-212ENST00000473961 C22orf39Q6P5X5 142 aa2.48□□□□□ -2.01
BRCA1-212ENST00000473961 Q6Q795 121 aa2.48□□□□□ -2.01
BRCA1-212ENST00000473961 TMEM14EPQ6UXP3 125 aa2.48□□□□□ -2.01
BRCA1-212ENST00000473961 C6orf201Q7Z4U5 140 aa2.48□□□□□ -2.01
BRCA1-212ENST00000473961 ATP5L2Q7Z4Y8 100 aa2.48□□□□□ -2.01
BRCA1-212ENST00000473961 AMN1Q8IY45 258 aa2.48□□□□□ -2.01
BRCA1-212ENST00000473961 RAB37Q96AX2 223 aa2.48□□□□□ -2.01
BRCA1-212ENST00000473961 ZC2HC1AQ96GY0 325 aa2.48□□□□□ -2.01
BRCA1-212ENST00000473961 DNAJC30Q96LL9 226 aa2.48□□□□□ -2.01
BRCA1-212ENST00000473961 SPANXDQ9BXN6 97 aa2.48□□□□□ -2.01
BRCA1-212ENST00000473961 MAP1LC3AQ9H492 121 aa2.48□□□□□ -2.01
BRCA1-212ENST00000473961 HIGD1BQ9P298 99 aa2.48□□□□□ -2.01
BRCA1-212ENST00000473961 TNRC6AQ8NDV7 1962 aaKnown RBP2.48□□□□□ -2.01
BRCA1-212ENST00000473961 TRPM6Q9BX84 2022 aa2.47□□□□□ -2.01
BRCA1-212ENST00000473961 NUMA1Q14980 2115 aa2.47□□□□□ -2.01
BRCA1-212ENST00000473961 PAPPA2Q9BXP8 1791 aa2.47□□□□□ -2.01
BRCA1-212ENST00000473961 TRBV20OR9-2A0A075B6H5 130 aa2.47□□□□□ -2.01
BRCA1-212ENST00000473961 IGHV3-21A0A0B4J1V1 117 aa2.47□□□□□ -2.01
BRCA1-212ENST00000473961 IGHV3-43A0A0B4J1X8 118 aa2.47□□□□□ -2.01
BRCA1-212ENST00000473961 IGKV1-9A0A0C4DH69 117 aa2.47□□□□□ -2.01
BRCA1-212ENST00000473961 UBE2L5PA0A1B0GUS4 154 aa2.47□□□□□ -2.01
BRCA1-212ENST00000473961 A0A1W2PRE2 83 aa2.47□□□□□ -2.01
BRCA1-212ENST00000473961 SMIM9A6NGZ8 99 aa2.47□□□□□ -2.01
BRCA1-212ENST00000473961 C21orf140B9A014 251 aa2.47□□□□□ -2.01
BRCA1-212ENST00000473961 C4orf51C9J302 202 aa2.47□□□□□ -2.01
BRCA1-212ENST00000473961 PGLYRP1O75594 196 aaPredicted RBP2.47□□□□□ -2.01
BRCA1-212ENST00000473961 APOMO95445 188 aa2.47□□□□□ -2.01
BRCA1-212ENST00000473961 MT-ATP8P03928 68 aa2.47□□□□□ -2.01
BRCA1-212ENST00000473961 IFITM1P13164 125 aa2.47□□□□□ -2.01
BRCA1-212ENST00000473961 ATP5G3P48201 142 aa2.47□□□□□ -2.01
BRCA1-212ENST00000473961 SPANXN5Q5MJ07 72 aa2.47□□□□□ -2.01
BRCA1-212ENST00000473961 TMEM78Q5T7P6 136 aa2.47□□□□□ -2.01
BRCA1-212ENST00000473961 PPDPFLQ8WWR9 84 aa2.47□□□□□ -2.01
BRCA1-212ENST00000473961 C20orf78Q9BR46 151 aa2.47□□□□□ -2.01
BRCA1-212ENST00000473961 NPCDR1Q9BY65 106 aa2.47□□□□□ -2.01
BRCA1-212ENST00000473961 MRPL32Q9BYC8 188 aaKnown RBP2.47□□□□□ -2.01
BRCA1-212ENST00000473961 SOX21Q9Y651 276 aaPredicted RBP2.47□□□□□ -2.01
BRCA1-212ENST00000473961 OBSL1O75147 1896 aa2.47□□□□□ -2.01
BRCA1-212ENST00000473961 SCN3AQ9NY46 2000 aa2.47□□□□□ -2.01
BRCA1-212ENST00000473961 CPAMD8Q8IZJ3 1885 aa2.46□□□□□ -2.02
BRCA1-212ENST00000473961 COL4A2P08572 1712 aa2.46□□□□□ -2.02
BRCA1-212ENST00000473961 IGHV1-24A0A0C4DH33 117 aa2.46□□□□□ -2.02
BRCA1-212ENST00000473961 A8MUU9 505 aa2.46□□□□□ -2.02
BRCA1-212ENST00000473961 FNDC10F2Z333 226 aa2.46□□□□□ -2.02
BRCA1-212ENST00000473961 J3QLI3 93 aa2.46□□□□□ -2.02
BRCA1-212ENST00000473961 IGLV3-1P01715 115 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms