RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 ZNF189O75820 626 aaPredicted RBP1.28□□□□□ -2.2
CALD1-216ENST00000473714 HAND1O96004 215 aa1.28□□□□□ -2.2
CALD1-216ENST00000473714 CTSGP08311 255 aa1.28□□□□□ -2.2
CALD1-216ENST00000473714 ZNF728P0DKX0 622 aa1.28□□□□□ -2.2
CALD1-216ENST00000473714 IGHV3-30-3P0DP02 117 aa1.28□□□□□ -2.2
CALD1-216ENST00000473714 HRES1P13985 223 aa1.28□□□□□ -2.2
CALD1-216ENST00000473714 MIFP14174 115 aa1.28□□□□□ -2.2
CALD1-216ENST00000473714 ZNF22P17026 224 aaPredicted RBP1.28□□□□□ -2.2
CALD1-216ENST00000473714 CRYBB3P26998 211 aa1.28□□□□□ -2.2
CALD1-216ENST00000473714 BLVRBP30043 206 aaPredicted RBP1.28□□□□□ -2.2
CALD1-216ENST00000473714 CCL18P55774 89 aa1.28□□□□□ -2.2
CALD1-216ENST00000473714 FXYD7P58549 80 aa1.28□□□□□ -2.2
CALD1-216ENST00000473714 DEFA1P59665 94 aa1.28□□□□□ -2.2
CALD1-216ENST00000473714 RANP62826 216 aaKnown RBP1.28□□□□□ -2.2
CALD1-216ENST00000473714 RPL30P62888 115 aaKnown RBP1.28□□□□□ -2.2
CALD1-216ENST00000473714 AKR1C1Q04828 323 aa1.28□□□□□ -2.2
CALD1-216ENST00000473714 DIAPH2-AS1Q14236 149 aa1.28□□□□□ -2.2
CALD1-216ENST00000473714 GUK1Q16774 197 aa1.28□□□□□ -2.2
CALD1-216ENST00000473714 TMEM97Q5BJF2 176 aa1.28□□□□□ -2.2
CALD1-216ENST00000473714 HACD4Q5VWC8 232 aa1.28□□□□□ -2.2
CALD1-216ENST00000473714 KRTAP5-7Q6L8G8 165 aa1.28□□□□□ -2.2
CALD1-216ENST00000473714 SFXN4Q6P4A7 337 aa1.28□□□□□ -2.2
CALD1-216ENST00000473714 OR6V1Q8N148 313 aa1.28□□□□□ -2.2
CALD1-216ENST00000473714 ZNF676Q8N7Q3 588 aa1.28□□□□□ -2.2
CALD1-216ENST00000473714 OR10P1Q8NGE3 313 aa1.28□□□□□ -2.2
CALD1-216ENST00000473714 MRPS24Q96EL2 167 aaKnown RBP1.28□□□□□ -2.2
CALD1-216ENST00000473714 TVP23CQ96ET8 276 aa1.28□□□□□ -2.2
CALD1-216ENST00000473714 ERMAPQ96PL5 475 aaPredicted RBP1.28□□□□□ -2.2
CALD1-216ENST00000473714 SIGMAR1Q99720 223 aa1.28□□□□□ -2.2
CALD1-216ENST00000473714 DCSTAMPQ9H295 470 aa1.28□□□□□ -2.2
CALD1-216ENST00000473714 TMEM133Q9H2Q1 129 aa1.28□□□□□ -2.2
CALD1-216ENST00000473714 CMTM6Q9NX76 183 aa1.28□□□□□ -2.2
CALD1-216ENST00000473714 PYCARDQ9ULZ3 195 aa1.28□□□□□ -2.2
CALD1-216ENST00000473714 PRELID1Q9Y255 219 aa1.28□□□□□ -2.2
CALD1-216ENST00000473714 TRBV20OR9-2A0A075B6H5 130 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 IGKV1D-42A0A075B6H8 117 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 TRAV3A0A0B4J244 114 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 TRAV41A0A0B4J266 112 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 A0A1B0GU33 70 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 A0A1B0GW54 56 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 TMEM235A6NFC5 223 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 SMIM9A6NGZ8 99 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 OR4C46A6NHA9 309 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 C9JCJ5 164 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 G3V3Q6 166 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 PDE6DO43924 150 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 HLA-DRB1P01911 266 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 C1QCP02747 245 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 BPGMP07738 259 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 CST2P09228 141 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 UCHL1P09936 223 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 GZMBP10144 247 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 RNASE2P10153 161 aaKnown RBP1.27□□□□□ -2.21
CALD1-216ENST00000473714 FGF6P10767 208 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 HTN3P15516 51 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 GZMHP20718 246 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 RPL5P46777 297 aaKnown RBP1.27□□□□□ -2.21
CALD1-216ENST00000473714 TPPP2P59282 170 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 HIST1H3AP68431 136 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 KRTAP19-6Q3LI70 58 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 TNFAIP8L3Q5GJ75 292 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 C10orf128Q5T292 105 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 IBA57Q5T440 356 aaKnown RBP1.27□□□□□ -2.21
CALD1-216ENST00000473714 FAM27BQ5VT28 67 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 PP632Q6XCG6 107 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 S100A7AQ86SG5 101 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 ZNF664Q8N3J9 261 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 Q8N6K4 173 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 OR2T4Q8NH00 348 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 ZNF714Q96N38 554 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 UPK3BQ9BT76 320 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 TMEM147Q9BVK8 224 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 PRELID3BQ9Y3B1 194 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 NOP16Q9Y3C1 178 aaKnown RBP1.27□□□□□ -2.21
CALD1-216ENST00000473714 TIMM22Q9Y584 194 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 TIMM9Q9Y5J7 89 aa1.27□□□□□ -2.21
CALD1-216ENST00000473714 HMCN1Q96RW7 5635 aa1.26□□□□□ -2.21
CALD1-216ENST00000473714 A0A096LPI6 279 aa1.26□□□□□ -2.21
CALD1-216ENST00000473714 A0A0J9YX75 114 aa1.26□□□□□ -2.21
CALD1-216ENST00000473714 C2orf70A6NJV1 201 aa1.26□□□□□ -2.21
CALD1-216ENST00000473714 RFPL4AA6NLU0 287 aa1.26□□□□□ -2.21
CALD1-216ENST00000473714 FNDC10F2Z333 226 aa1.26□□□□□ -2.21
CALD1-216ENST00000473714 RFPL4AL1F8VTS6 287 aa1.26□□□□□ -2.21
CALD1-216ENST00000473714 INMT-MINDY4F8WBC2 141 aa1.26□□□□□ -2.21
CALD1-216ENST00000473714 H3BPC8 53 aa1.26□□□□□ -2.21
CALD1-216ENST00000473714 LST1O00453 97 aa1.26□□□□□ -2.21
CALD1-216ENST00000473714 PLA2G10O15496 165 aa1.26□□□□□ -2.21
CALD1-216ENST00000473714 OR2T1O43869 369 aa1.26□□□□□ -2.21
CALD1-216ENST00000473714 NPYP01303 97 aa1.26□□□□□ -2.21
CALD1-216ENST00000473714 SRP19P09132 144 aaKnown RBP1.26□□□□□ -2.21
CALD1-216ENST00000473714 CCL1P22362 96 aa1.26□□□□□ -2.21
CALD1-216ENST00000473714 EIF2B2P49770 351 aaKnown RBP1.26□□□□□ -2.21
CALD1-216ENST00000473714 PCBD1P61457 104 aa1.26□□□□□ -2.21
CALD1-216ENST00000473714 POLR2GP62487 172 aaKnown RBP eCLIP1.26□□□□□ -2.21
CALD1-216ENST00000473714 HBA1P69905 142 aa1.26□□□□□ -2.21
CALD1-216ENST00000473714 RPL19P84098 196 aaKnown RBP1.26□□□□□ -2.21
CALD1-216ENST00000473714 DEFA5Q01523 94 aa1.26□□□□□ -2.21
CALD1-216ENST00000473714 KRTAP13-2Q52LG2 175 aa1.26□□□□□ -2.21
CALD1-216ENST00000473714 ZNF705AQ6ZN79 300 aaPredicted RBP1.26□□□□□ -2.21
CALD1-216ENST00000473714 Q6ZS49 121 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms