RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 METTL26Q96S19 204 aa16.14■□□□□ 0.17
COL18A1-207ENST00000473212 CSMD2Q7Z408 3487 aa16.13■□□□□ 0.17
COL18A1-207ENST00000473212 NHP2Q9NX24 153 aaKnown RBP16.13■□□□□ 0.17
COL18A1-207ENST00000473212 UBE2E1P51965 193 aa16.13■□□□□ 0.17
COL18A1-207ENST00000473212 EFNA4P52798 201 aa16.13■□□□□ 0.17
COL18A1-207ENST00000473212 MAPKAPK5-AS1Q8N8E1 139 aa16.13■□□□□ 0.17
COL18A1-207ENST00000473212 PRR9Q5T870 116 aa16.12■□□□□ 0.17
COL18A1-207ENST00000473212 EEF1AKMT3Q96AZ1 226 aa16.12■□□□□ 0.17
COL18A1-207ENST00000473212 CENPVL3A0A0U1RRI6 287 aa16.12■□□□□ 0.17
COL18A1-207ENST00000473212 CEND1Q8N111 149 aa16.12■□□□□ 0.17
COL18A1-207ENST00000473212 PHLDA1Q8WV24 401 aaPredicted RBP16.12■□□□□ 0.17
COL18A1-207ENST00000473212 H3BVH4 76 aa16.11■□□□□ 0.17
COL18A1-207ENST00000473212 LMO4P61968 165 aa16.11■□□□□ 0.17
COL18A1-207ENST00000473212 LY6DQ14210 128 aa16.11■□□□□ 0.17
COL18A1-207ENST00000473212 PRSS47A8MTI9 375 aa16.11■□□□□ 0.17
COL18A1-207ENST00000473212 KLK9Q2XQG4 91 aa16.11■□□□□ 0.17
COL18A1-207ENST00000473212 C9orf47Q6ZRZ4 202 aa16.11■□□□□ 0.17
COL18A1-207ENST00000473212 KLK9Q9UKQ9 250 aa16.11■□□□□ 0.17
COL18A1-207ENST00000473212 TM2D2Q9BX73 214 aa16.1■□□□□ 0.17
COL18A1-207ENST00000473212 TRBV12-3P01733 135 aa16.1■□□□□ 0.17
COL18A1-207ENST00000473212 A0A087WX48 190 aa16.09■□□□□ 0.17
COL18A1-207ENST00000473212 SRSF1Q07955 248 aaKnown RBP eCLIP16.09■□□□□ 0.17
COL18A1-207ENST00000473212 MRPL53Q96EL3 112 aaKnown RBP16.09■□□□□ 0.17
COL18A1-207ENST00000473212 BRD3OSQ6XYD6 125 aa16.09■□□□□ 0.17
COL18A1-207ENST00000473212 C16orf92Q96LL3 132 aa16.09■□□□□ 0.17
COL18A1-207ENST00000473212 C20orf173Q96LM9 149 aa16.09■□□□□ 0.17
COL18A1-207ENST00000473212 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.08■□□□□ 0.171e-15■□□□□ 10
COL18A1-207ENST00000473212 TRBV7-1A0A0A6YYK4 115 aa16.08■□□□□ 0.17
COL18A1-207ENST00000473212 IGHV4-4A0A075B6R2 117 aa16.08■□□□□ 0.16
COL18A1-207ENST00000473212 C19orf84I3L1E1 186 aa16.08■□□□□ 0.16
COL18A1-207ENST00000473212 HLA-DRB4P13762 266 aa16.08■□□□□ 0.16
COL18A1-207ENST00000473212 C5orf56Q8N8D9 126 aa16.08■□□□□ 0.16
COL18A1-207ENST00000473212 HIF1ANQ9NWT6 349 aa16.08■□□□□ 0.16
COL18A1-207ENST00000473212 HLA-DRB4X5D2U9 266 aa16.08■□□□□ 0.16
COL18A1-207ENST00000473212 NPFFO15130 113 aa16.07■□□□□ 0.16
COL18A1-207ENST00000473212 UNQ9165/PRO28630Q6UXU0 137 aa16.07■□□□□ 0.16
COL18A1-207ENST00000473212 U3KQE9 123 aa16.07■□□□□ 0.16
COL18A1-207ENST00000473212 RPL24P83731 157 aaKnown RBP16.07■□□□□ 0.16
COL18A1-207ENST00000473212 KLK15Q9H2R5 256 aa16.07■□□□□ 0.16
COL18A1-207ENST00000473212 AGRNO00468 2067 aa16.07■□□□□ 0.16
COL18A1-207ENST00000473212 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.06■□□□□ 0.16
COL18A1-207ENST00000473212 ATP5G2Q06055 141 aa16.06■□□□□ 0.16
COL18A1-207ENST00000473212 SMIM2Q9BVW6 85 aa16.06■□□□□ 0.16
COL18A1-207ENST00000473212 LCNL1Q6ZST4 164 aa16.05■□□□□ 0.16
COL18A1-207ENST00000473212 M0R381 172 aa16.04■□□□□ 0.16
COL18A1-207ENST00000473212 PLNP26678 52 aa16.04■□□□□ 0.16
COL18A1-207ENST00000473212 MRAP2Q96G30 205 aa16.04■□□□□ 0.16
COL18A1-207ENST00000473212 CSPG4Q6UVK1 2322 aa16.04■□□□□ 0.16
COL18A1-207ENST00000473212 IGKV3-7A0A075B6H7 116 aa16.04■□□□□ 0.16
COL18A1-207ENST00000473212 TEX48A0A1B0GUV7 120 aa16.04■□□□□ 0.16
COL18A1-207ENST00000473212 IGLL5B9A064 214 aa16.03■□□□□ 0.16
COL18A1-207ENST00000473212 HIST1H4GQ99525 98 aa16.03■□□□□ 0.16
COL18A1-207ENST00000473212 E9PLD3 99 aa16.03■□□□□ 0.16
COL18A1-207ENST00000473212 GPHB5Q86YW7 130 aa16.03■□□□□ 0.16
COL18A1-207ENST00000473212 H7C1H1 209 aa16.02■□□□□ 0.16
COL18A1-207ENST00000473212 GLMPQ8WWB7 406 aa16.02■□□□□ 0.16
COL18A1-207ENST00000473212 UTP20O75691 2785 aaKnown RBP16.02■□□□□ 0.16
COL18A1-207ENST00000473212 F8VRH5 84 aa16.02■□□□□ 0.15
COL18A1-207ENST00000473212 IGHV3-11P01762 117 aa16.02■□□□□ 0.15
COL18A1-207ENST00000473212 C12orf74Q32Q52 190 aa16.02■□□□□ 0.15
COL18A1-207ENST00000473212 ITLN2Q8WWU7 325 aaPredicted RBP16.02■□□□□ 0.15
COL18A1-207ENST00000473212 SCGB3A1Q96QR1 104 aa16.02■□□□□ 0.15
COL18A1-207ENST00000473212 TRAV41A0A0B4J266 112 aa16.01■□□□□ 0.15
COL18A1-207ENST00000473212 F6UB75 175 aa16.01■□□□□ 0.15
COL18A1-207ENST00000473212 LY6EQ16553 131 aa16.01■□□□□ 0.15
COL18A1-207ENST00000473212 RASL10AQ92737 203 aa16.01■□□□□ 0.15
COL18A1-207ENST00000473212 RPL39LQ96EH5 51 aaKnown RBP16.01■□□□□ 0.15
COL18A1-207ENST00000473212 C9orf139Q6ZV77 190 aa16.01■□□□□ 0.15
COL18A1-207ENST00000473212 ZNF479Q96JC4 524 aa16.01■□□□□ 0.15
COL18A1-207ENST00000473212 CHTOPQ9Y3Y2 248 aaKnown RBP16.01■□□□□ 0.15
COL18A1-207ENST00000473212 TRAV12-1A0A0B4J245 112 aa16■□□□□ 0.15
COL18A1-207ENST00000473212 SUMO2P61956 95 aaKnown RBP16■□□□□ 0.15
COL18A1-207ENST00000473212 TAL2Q16559 108 aa16■□□□□ 0.15
COL18A1-207ENST00000473212 C14orf178Q8N769 122 aaPredicted RBP16■□□□□ 0.15
COL18A1-207ENST00000473212 S100A4P26447 101 aaKnown RBP16■□□□□ 0.15
COL18A1-207ENST00000473212 ZFAND2AQ8N6M9 145 aa16■□□□□ 0.15
COL18A1-207ENST00000473212 DEFB104AQ8WTQ1 72 aa16■□□□□ 0.15
COL18A1-207ENST00000473212 ORMDL2Q53FV1 153 aa15.99■□□□□ 0.15
COL18A1-207ENST00000473212 FOXI2Q6ZQN5 318 aa15.99■□□□□ 0.15
COL18A1-207ENST00000473212 Q6ZS46 218 aa15.99■□□□□ 0.15
COL18A1-207ENST00000473212 ARL3P36405 182 aa15.99■□□□□ 0.15
COL18A1-207ENST00000473212 TOMM6Q96B49 74 aa15.99■□□□□ 0.15
COL18A1-207ENST00000473212 LENEPQ9Y5L5 61 aa15.99■□□□□ 0.15
COL18A1-207ENST00000473212 FLNCQ14315 2725 aa15.99■□□□□ 0.15
COL18A1-207ENST00000473212 CFAP46Q8IYW2 2715 aa15.98■□□□□ 0.15
COL18A1-207ENST00000473212 TMEM238C9JI98 176 aa15.98■□□□□ 0.15
COL18A1-207ENST00000473212 OR11H12B2RN74 326 aa15.98■□□□□ 0.15
COL18A1-207ENST00000473212 IGHV4-39P01824 125 aa15.98■□□□□ 0.15
COL18A1-207ENST00000473212 EDN2P20800 178 aa15.98■□□□□ 0.15
COL18A1-207ENST00000473212 OR11H1Q8NG94 326 aa15.98■□□□□ 0.15
COL18A1-207ENST00000473212 OR11H2Q8NH07 326 aa15.98■□□□□ 0.15
COL18A1-207ENST00000473212 LINC00477Q96M19 166 aa15.98■□□□□ 0.15
COL18A1-207ENST00000473212 TRBV7-3A0A075B6L6 115 aa15.97■□□□□ 0.15
COL18A1-207ENST00000473212 TRAV21A0A0B4J279 112 aa15.97■□□□□ 0.15
COL18A1-207ENST00000473212 MGPP08493 103 aa15.97■□□□□ 0.15
COL18A1-207ENST00000473212 UCNP55089 124 aa15.97■□□□□ 0.15
COL18A1-207ENST00000473212 WFDC2Q14508 124 aa15.97■□□□□ 0.15
COL18A1-207ENST00000473212 NEXN-AS1Q8NBZ9 246 aa15.97■□□□□ 0.15
COL18A1-207ENST00000473212 OR10J6PQ8NGY7 276 aa15.97■□□□□ 0.15
COL18A1-207ENST00000473212 DPH3P1Q9H4G8 78 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms