RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 RPH3ALQ9UNE2 315 aa10.43□□□□□ -0.74
VTI1A-203ENST00000472892 TRAV8-1A0A0A6YYK1 113 aa10.42□□□□□ -0.74
VTI1A-203ENST00000472892 HMGB3O15347 200 aaKnown RBP10.42□□□□□ -0.74
VTI1A-203ENST00000472892 ORM1P02763 201 aa10.42□□□□□ -0.74
VTI1A-203ENST00000472892 MAPKAPK5-AS1Q8N8E1 139 aa10.42□□□□□ -0.74
VTI1A-203ENST00000472892 OR2G3Q8NGZ4 309 aa10.42□□□□□ -0.74
VTI1A-203ENST00000472892 TREM1Q9NP99 234 aa10.42□□□□□ -0.74
VTI1A-203ENST00000472892 TRAV4A0A0B4J268 109 aa10.41□□□□□ -0.74
VTI1A-203ENST00000472892 M0R2P5 195 aa10.41□□□□□ -0.74
VTI1A-203ENST00000472892 STAG3L2P0CL84 134 aa10.41□□□□□ -0.74
VTI1A-203ENST00000472892 STAG3L3P0CL85 134 aa10.41□□□□□ -0.74
VTI1A-203ENST00000472892 ARL14EPLP0DKL9 152 aa10.41□□□□□ -0.74
VTI1A-203ENST00000472892 GYPEP15421 78 aa10.41□□□□□ -0.74
VTI1A-203ENST00000472892 SRIP30626 198 aa10.41□□□□□ -0.74
VTI1A-203ENST00000472892 GNG5P63218 68 aa10.41□□□□□ -0.74
VTI1A-203ENST00000472892 SUN5Q8TC36 379 aa10.41□□□□□ -0.74
VTI1A-203ENST00000472892 AQP10Q96PS8 301 aa10.41□□□□□ -0.74
VTI1A-203ENST00000472892 PSMG3Q9BT73 122 aaPredicted RBP10.41□□□□□ -0.74
VTI1A-203ENST00000472892 BATF3Q9NR55 127 aa10.41□□□□□ -0.74
VTI1A-203ENST00000472892 TRAV9-2A0A087WT02 112 aa10.4□□□□□ -0.74
VTI1A-203ENST00000472892 SERTM2A0A1B0GWG4 89 aa10.4□□□□□ -0.74
VTI1A-203ENST00000472892 F6UZH7 168 aa10.4□□□□□ -0.74
VTI1A-203ENST00000472892 TYMSP04818 313 aa10.4□□□□□ -0.74
VTI1A-203ENST00000472892 CDC34P49427 236 aaPredicted RBP10.4□□□□□ -0.74
VTI1A-203ENST00000472892 HSD17B11Q8NBQ5 300 aa10.4□□□□□ -0.74
VTI1A-203ENST00000472892 OR4C5Q8NGB2 326 aa10.4□□□□□ -0.74
VTI1A-203ENST00000472892 PCNPQ8WW12 178 aaKnown RBP10.4□□□□□ -0.74
VTI1A-203ENST00000472892 RAB24Q969Q5 203 aa10.4□□□□□ -0.74
VTI1A-203ENST00000472892 KCNS1Q96KK3 526 aa10.4□□□□□ -0.74
VTI1A-203ENST00000472892 SDF2L1Q9HCN8 221 aa10.4□□□□□ -0.74
VTI1A-203ENST00000472892 TNFRSF18Q9Y5U5 241 aa10.4□□□□□ -0.74
VTI1A-203ENST00000472892 C9JCJ5 164 aa10.39□□□□□ -0.75
VTI1A-203ENST00000472892 K7EP13 123 aa10.39□□□□□ -0.75
VTI1A-203ENST00000472892 TCRAP04437 139 aa10.39□□□□□ -0.75
VTI1A-203ENST00000472892 SERF2P84101 59 aa10.39□□□□□ -0.75
VTI1A-203ENST00000472892 NFE4Q86UQ8 179 aa10.39□□□□□ -0.75
VTI1A-203ENST00000472892 SGK494Q96LW2 274 aa10.39□□□□□ -0.75
VTI1A-203ENST00000472892 LY96Q9Y6Y9 160 aa10.39□□□□□ -0.75
VTI1A-203ENST00000472892 PTTG1O95997 202 aa10.38□□□□□ -0.75
VTI1A-203ENST00000472892 MBP02144 154 aa10.38□□□□□ -0.75
VTI1A-203ENST00000472892 ATP6V0CP27449 155 aa10.38□□□□□ -0.75
VTI1A-203ENST00000472892 GCHFRP30047 84 aa10.38□□□□□ -0.75
VTI1A-203ENST00000472892 Q8N1X5 172 aa10.38□□□□□ -0.75
VTI1A-203ENST00000472892 C5orf17Q8NAS9 161 aa10.38□□□□□ -0.75
VTI1A-203ENST00000472892 ASB13Q8WXK3 278 aa10.38□□□□□ -0.75
VTI1A-203ENST00000472892 TXNDC17Q9BRA2 123 aa10.38□□□□□ -0.75
VTI1A-203ENST00000472892 MED28Q9H204 178 aa10.38□□□□□ -0.75
VTI1A-203ENST00000472892 IGLV2-11P01706 119 aa10.37□□□□□ -0.75
VTI1A-203ENST00000472892 DNAH10OSP0CZ25 163 aa10.37□□□□□ -0.75
VTI1A-203ENST00000472892 ZNF80P51504 273 aaPredicted RBP10.37□□□□□ -0.75
VTI1A-203ENST00000472892 Q5BKY6 102 aa10.37□□□□□ -0.75
VTI1A-203ENST00000472892 SH2D6Q7Z4S9 175 aa10.37□□□□□ -0.75
VTI1A-203ENST00000472892 WFDC10BQ8IUB3 73 aa10.37□□□□□ -0.75
VTI1A-203ENST00000472892 NDFIP1Q9BT67 221 aa10.37□□□□□ -0.75
VTI1A-203ENST00000472892 C11orf21Q9P2W6 132 aa10.37□□□□□ -0.75
VTI1A-203ENST00000472892 TNFSF18Q9UNG2 199 aa10.37□□□□□ -0.75
VTI1A-203ENST00000472892 K7EQM0 130 aa10.36□□□□□ -0.75
VTI1A-203ENST00000472892 TAAR5O14804 337 aa10.36□□□□□ -0.75
VTI1A-203ENST00000472892 EREGO14944 169 aa10.36□□□□□ -0.75
VTI1A-203ENST00000472892 CXorf1O96002 111 aa10.36□□□□□ -0.75
VTI1A-203ENST00000472892 GATA1P15976 413 aaPredicted RBP10.36□□□□□ -0.75
VTI1A-203ENST00000472892 EVI2AP22794 236 aa10.36□□□□□ -0.75
VTI1A-203ENST00000472892 TIRAPP58753 221 aa10.36□□□□□ -0.75
VTI1A-203ENST00000472892 SUMO1P63165 101 aaKnown RBP10.36□□□□□ -0.75
VTI1A-203ENST00000472892 MSRB1Q9NZV6 116 aa10.36□□□□□ -0.75
VTI1A-203ENST00000472892 EPDR1Q9UM22 224 aa10.36□□□□□ -0.75
VTI1A-203ENST00000472892 PSG8Q9UQ74 426 aa10.36□□□□□ -0.75
VTI1A-203ENST00000472892 LOC100131303A0A0U1RQF7 123 aa10.35□□□□□ -0.75
VTI1A-203ENST00000472892 CIDEAO60543 219 aa10.35□□□□□ -0.75
VTI1A-203ENST00000472892 ERVFC1-1P60608 527 aa10.35□□□□□ -0.75
VTI1A-203ENST00000472892 ZNF876PQ49A33 203 aa10.35□□□□□ -0.75
VTI1A-203ENST00000472892 ACTR3CQ9C0K3 210 aaPredicted RBP10.35□□□□□ -0.75
VTI1A-203ENST00000472892 SH3BGRL3Q9H299 93 aa10.35□□□□□ -0.75
VTI1A-203ENST00000472892 SCRT2Q9NQ03 307 aa10.35□□□□□ -0.75
VTI1A-203ENST00000472892 TMEM167BQ9NRX6 74 aa10.35□□□□□ -0.75
VTI1A-203ENST00000472892 A0A087WTM6 91 aa10.34□□□□□ -0.75
VTI1A-203ENST00000472892 FBLL1A6NHQ2 334 aaKnown RBP10.34□□□□□ -0.75
VTI1A-203ENST00000472892 GGTLC3B5MD39 225 aa10.34□□□□□ -0.75
VTI1A-203ENST00000472892 RS1O15537 224 aa10.34□□□□□ -0.75
VTI1A-203ENST00000472892 GCGP01275 180 aa10.34□□□□□ -0.75
VTI1A-203ENST00000472892 PFN1P07737 140 aaKnown RBP10.34□□□□□ -0.75
VTI1A-203ENST00000472892 GIPP09681 153 aaPredicted RBP10.34□□□□□ -0.75
VTI1A-203ENST00000472892 FLI1Q01543 452 aaPredicted RBP10.34□□□□□ -0.75
VTI1A-203ENST00000472892 CDPF1Q6NVV7 123 aa10.34□□□□□ -0.75
VTI1A-203ENST00000472892 PTH2Q96A98 100 aa10.34□□□□□ -0.75
VTI1A-203ENST00000472892 C9orf85Q96MD7 179 aa10.34□□□□□ -0.75
VTI1A-203ENST00000472892 A0A1W2PRE2 83 aa10.33□□□□□ -0.76
VTI1A-203ENST00000472892 SMUG1Q53HV7 270 aa10.33□□□□□ -0.76
VTI1A-203ENST00000472892 SAPCD1Q5SSQ6 148 aa10.33□□□□□ -0.76
VTI1A-203ENST00000472892 CFAP126Q5VTH2 177 aa10.33□□□□□ -0.76
VTI1A-203ENST00000472892 DPPA3Q6W0C5 159 aa10.33□□□□□ -0.76
VTI1A-203ENST00000472892 PRNTQ86SH4 94 aa10.33□□□□□ -0.76
VTI1A-203ENST00000472892 CYB561D1Q8N8Q1 229 aa10.33□□□□□ -0.76
VTI1A-203ENST00000472892 SLC25A29Q8N8R3 303 aa10.33□□□□□ -0.76
VTI1A-203ENST00000472892 TMEM75Q8N9X5 138 aa10.33□□□□□ -0.76
VTI1A-203ENST00000472892 INO80EQ8NBZ0 244 aaPredicted RBP10.33□□□□□ -0.76
VTI1A-203ENST00000472892 TRBV6-4A0A1B0GX49 114 aa10.32□□□□□ -0.76
VTI1A-203ENST00000472892 RNF222A6NCQ9 220 aa10.32□□□□□ -0.76
VTI1A-203ENST00000472892 CRYGDP07320 174 aa10.32□□□□□ -0.76
VTI1A-203ENST00000472892 FUSP35637 526 aaKnown RBP eCLIP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms