RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 DPM2O94777 84 aa0.47□□□□□ -2.33
PRPF40A-208ENST00000472760 TCRAP04437 139 aa0.47□□□□□ -2.33
PRPF40A-208ENST00000472760 ADCYAP1P18509 176 aa0.47□□□□□ -2.33
PRPF40A-208ENST00000472760 OR8I2Q8N0Y5 310 aa0.47□□□□□ -2.33
PRPF40A-208ENST00000472760 OR4S1Q8NGB4 309 aa0.47□□□□□ -2.33
PRPF40A-208ENST00000472760 OVOS2A0A0G2JMS6 1433 aa0.47□□□□□ -2.33
PRPF40A-208ENST00000472760 ASH1LQ9NR48 2969 aaKnown RBP0.46□□□□□ -2.34
PRPF40A-208ENST00000472760 HIST1H1BP16401 226 aaKnown RBP0.46□□□□□ -2.34
PRPF40A-208ENST00000472760 HSD17B12Q53GQ0 312 aa0.46□□□□□ -2.34
PRPF40A-208ENST00000472760 CALML5Q9NZT1 146 aa0.46□□□□□ -2.34
PRPF40A-208ENST00000472760 HSPB11Q9Y547 144 aa0.46□□□□□ -2.34
PRPF40A-208ENST00000472760 MUC5ACP98088 5654 aa0.46□□□□□ -2.34
PRPF40A-208ENST00000472760 CDK12Q9NYV4 1490 aaPredicted RBP0.46□□□□□ -2.34
PRPF40A-208ENST00000472760 SPTBP11277 2137 aa0.46□□□□□ -2.34
PRPF40A-208ENST00000472760 H0YJX3 145 aa0.45□□□□□ -2.34
PRPF40A-208ENST00000472760 POLR2JP52435 117 aaKnown RBP0.45□□□□□ -2.34
PRPF40A-208ENST00000472760 RPS28P62857 69 aaKnown RBP0.45□□□□□ -2.34
PRPF40A-208ENST00000472760 METTL1Q9UBP6 276 aaKnown RBP0.45□□□□□ -2.34
PRPF40A-208ENST00000472760 GINS2Q9Y248 185 aa0.45□□□□□ -2.34
PRPF40A-208ENST00000472760 APCP25054 2843 aa0.44□□□□□ -2.34
PRPF40A-208ENST00000472760 FER1L6Q2WGJ9 1857 aa0.44□□□□□ -2.34
PRPF40A-208ENST00000472760 GNG14A0A1W2PPG7 69 aa0.44□□□□□ -2.34
PRPF40A-208ENST00000472760 CCKP06307 115 aa0.44□□□□□ -2.34
PRPF40A-208ENST00000472760 PAEPP09466 180 aa0.44□□□□□ -2.34
PRPF40A-208ENST00000472760 SDC4P31431 198 aa0.44□□□□□ -2.34
PRPF40A-208ENST00000472760 ZCCHC6Q5VYS8 1495 aaKnown RBP0.43□□□□□ -2.34
PRPF40A-208ENST00000472760 KLKP1Q107X0 134 aa0.43□□□□□ -2.34
PRPF40A-208ENST00000472760 SPINK6Q6UWN8 80 aa0.43□□□□□ -2.34
PRPF40A-208ENST00000472760 PTPRGP23470 1445 aa0.43□□□□□ -2.34
PRPF40A-208ENST00000472760 TRAV36DV7A0A075B6V5 113 aa0.42□□□□□ -2.34
PRPF40A-208ENST00000472760 OR8B8Q15620 311 aa0.42□□□□□ -2.34
PRPF40A-208ENST00000472760 SLC35B3Q9H1N7 401 aa0.42□□□□□ -2.34
PRPF40A-208ENST00000472760 TMEM14BQ9NUH8 114 aa0.42□□□□□ -2.34
PRPF40A-208ENST00000472760 TANC2Q9HCD6 1990 aa0.42□□□□□ -2.34
PRPF40A-208ENST00000472760 TRAV17A0A0B4J275 112 aa0.41□□□□□ -2.34
PRPF40A-208ENST00000472760 TRBV10-1A0A0K0K1A3 114 aa0.41□□□□□ -2.34
PRPF40A-208ENST00000472760 MT-ND4LP03901 98 aa0.41□□□□□ -2.34
PRPF40A-208ENST00000472760 PLGLB1Q02325 96 aa0.41□□□□□ -2.34
PRPF40A-208ENST00000472760 Q5XG85 94 aa0.41□□□□□ -2.34
PRPF40A-208ENST00000472760 WDR97A6NE52 1622 aa0.4□□□□□ -2.35
PRPF40A-208ENST00000472760 A0A1B0GX51 115 aa0.4□□□□□ -2.35
PRPF40A-208ENST00000472760 MRPL40Q9NQ50 206 aaKnown RBP0.4□□□□□ -2.35
PRPF40A-208ENST00000472760 CPDO75976 1380 aa0.4□□□□□ -2.35
PRPF40A-208ENST00000472760 BLMP54132 1417 aaPredicted RBP0.39□□□□□ -2.35
PRPF40A-208ENST00000472760 ARHGAP31Q2M1Z3 1444 aa0.39□□□□□ -2.35
PRPF40A-208ENST00000472760 USP24Q9UPU5 2620 aa0.39□□□□□ -2.35
PRPF40A-208ENST00000472760 DEGS1O15121 323 aa0.39□□□□□ -2.35
PRPF40A-208ENST00000472760 SMIM24O75264 130 aa0.39□□□□□ -2.35
PRPF40A-208ENST00000472760 APOC1P02654 83 aa0.39□□□□□ -2.35
PRPF40A-208ENST00000472760 CD3DP04234 171 aa0.39□□□□□ -2.35
PRPF40A-208ENST00000472760 NBEAP1P0C6P0 100 aa0.39□□□□□ -2.35
PRPF40A-208ENST00000472760 CMPK1P30085 196 aa0.39□□□□□ -2.35
PRPF40A-208ENST00000472760 TMEM91Q6ZNR0 172 aa0.39□□□□□ -2.35
PRPF40A-208ENST00000472760 VPS25Q9BRG1 176 aa0.39□□□□□ -2.35
PRPF40A-208ENST00000472760 BANF2Q9H503 90 aa0.39□□□□□ -2.35
PRPF40A-208ENST00000472760 OR2H2O95918 312 aa0.38□□□□□ -2.35
PRPF40A-208ENST00000472760 AKR1D1P51857 326 aa0.38□□□□□ -2.35
PRPF40A-208ENST00000472760 TCTE3Q8IZS6 198 aa0.38□□□□□ -2.35
PRPF40A-208ENST00000472760 PPDPFLQ8WWR9 84 aa0.38□□□□□ -2.35
PRPF40A-208ENST00000472760 TAS2R8Q9NYW2 309 aa0.38□□□□□ -2.35
PRPF40A-208ENST00000472760 KNTC1P50748 2209 aa0.38□□□□□ -2.35
PRPF40A-208ENST00000472760 LRP5O75197 1615 aa0.38□□□□□ -2.35
PRPF40A-208ENST00000472760 TRPM7Q96QT4 1865 aa0.37□□□□□ -2.35
PRPF40A-208ENST00000472760 KDM5CP41229 1560 aa0.37□□□□□ -2.35
PRPF40A-208ENST00000472760 TNFSF15O95150 251 aa0.37□□□□□ -2.35
PRPF40A-208ENST00000472760 B2MP61769 119 aa0.37□□□□□ -2.35
PRPF40A-208ENST00000472760 TMEM244Q5VVB8 128 aa0.37□□□□□ -2.35
PRPF40A-208ENST00000472760 SLC25A26Q70HW3 274 aa0.37□□□□□ -2.35
PRPF40A-208ENST00000472760 MAGOHBQ96A72 148 aaKnown RBP0.37□□□□□ -2.35
PRPF40A-208ENST00000472760 DSCR8Q96T75 97 aa0.37□□□□□ -2.35
PRPF40A-208ENST00000472760 SPANXA1Q9NS26 97 aa0.37□□□□□ -2.35
PRPF40A-208ENST00000472760 SPANXCQ9NY87 97 aa0.37□□□□□ -2.35
PRPF40A-208ENST00000472760 RREB1Q92766 1687 aa0.37□□□□□ -2.35
PRPF40A-208ENST00000472760 TEX49A0A1B0GTD5 131 aa0.36□□□□□ -2.35
PRPF40A-208ENST00000472760 A0A1B0GW64 132 aa0.36□□□□□ -2.35
PRPF40A-208ENST00000472760 C9JAW5 83 aa0.36□□□□□ -2.35
PRPF40A-208ENST00000472760 SCTP09683 121 aa0.36□□□□□ -2.35
PRPF40A-208ENST00000472760 MPC1LP0DKB6 136 aa0.36□□□□□ -2.35
PRPF40A-208ENST00000472760 TAC4Q86UU9 113 aa0.36□□□□□ -2.35
PRPF40A-208ENST00000472760 TMEM141Q96I45 108 aa0.36□□□□□ -2.35
PRPF40A-208ENST00000472760 COA4Q9NYJ1 87 aa0.36□□□□□ -2.35
PRPF40A-208ENST00000472760 HIGD1AQ9Y241 93 aa0.36□□□□□ -2.35
PRPF40A-208ENST00000472760 DNAJC15Q9Y5T4 150 aa0.36□□□□□ -2.35
PRPF40A-208ENST00000472760 ATG2AQ2TAZ0 1938 aa0.36□□□□□ -2.35
PRPF40A-208ENST00000472760 MEGF8Q7Z7M0 2845 aa0.35□□□□□ -2.35
PRPF40A-208ENST00000472760 KIDINS220Q9ULH0 1771 aa0.35□□□□□ -2.35
PRPF40A-208ENST00000472760 KMT2DO14686 5537 aa0.35□□□□□ -2.35
PRPF40A-208ENST00000472760 A0A096LNT2 108 aa0.35□□□□□ -2.35
PRPF40A-208ENST00000472760 HLA-DRB4P13762 266 aa0.35□□□□□ -2.35
PRPF40A-208ENST00000472760 CCDC153Q494R4 210 aa0.35□□□□□ -2.35
PRPF40A-208ENST00000472760 SNX29P2Q8IUI4 249 aa0.35□□□□□ -2.35
PRPF40A-208ENST00000472760 PPP1R1CQ8WVI7 109 aa0.35□□□□□ -2.35
PRPF40A-208ENST00000472760 HLA-DRB4X5D2U9 266 aa0.35□□□□□ -2.35
PRPF40A-208ENST00000472760 CCDC171Q6TFL3 1326 aa0.35□□□□□ -2.35
PRPF40A-208ENST00000472760 SYNE1Q8NF91 8797 aaKnown RBP0.34□□□□□ -2.35
PRPF40A-208ENST00000472760 RBP4P02753 201 aa0.34□□□□□ -2.36
PRPF40A-208ENST00000472760 TFF1P04155 84 aa0.34□□□□□ -2.36
PRPF40A-208ENST00000472760 BORCS7-ASMTA0A0B4J1R7 106 aa0.33□□□□□ -2.36
PRPF40A-208ENST00000472760 TRAV2A0A0B4J234 112 aa0.33□□□□□ -2.36
PRPF40A-208ENST00000472760 CXorf51AA0A1B0GTR3 108 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms