RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 GGTLC3B5MD39 225 aa13.49□□□□□ -0.25
COMMD1-208ENST00000472729 GCGP01275 180 aa13.49□□□□□ -0.25
COMMD1-208ENST00000472729 UBE2G2P60604 165 aa13.49□□□□□ -0.25
COMMD1-208ENST00000472729 MRPL23Q16540 153 aaKnown RBP13.49□□□□□ -0.25
COMMD1-208ENST00000472729 OR4C5Q8NGB2 326 aa13.49□□□□□ -0.25
COMMD1-208ENST00000472729 TVP23CQ96ET8 276 aa13.49□□□□□ -0.25
COMMD1-208ENST00000472729 MRPS16Q9Y3D3 137 aaKnown RBP13.49□□□□□ -0.25
COMMD1-208ENST00000472729 SMLR1H3BR10 107 aa13.48□□□□□ -0.25
COMMD1-208ENST00000472729 TMEM75Q8N9X5 138 aa13.48□□□□□ -0.25
COMMD1-208ENST00000472729 DNAH10Q8IVF4 4471 aa13.47□□□□□ -0.25
COMMD1-208ENST00000472729 IGHV3-16A0A0C4DH30 117 aa13.47□□□□□ -0.25
COMMD1-208ENST00000472729 PFN1P07737 140 aaKnown RBP13.47□□□□□ -0.25
COMMD1-208ENST00000472729 CRYBA4P53673 196 aa13.47□□□□□ -0.25
COMMD1-208ENST00000472729 FGF8P55075 233 aaPredicted RBP13.47□□□□□ -0.25
COMMD1-208ENST00000472729 FHL2Q14192 279 aa13.47□□□□□ -0.25
COMMD1-208ENST00000472729 UPK3BQ9BT76 320 aa13.47□□□□□ -0.25
COMMD1-208ENST00000472729 FRAS1Q86XX4 4008 aa13.47□□□□□ -0.25
COMMD1-208ENST00000472729 KANTRA0A1W2PQU2 76 aa13.46□□□□□ -0.25
COMMD1-208ENST00000472729 MAP1LC3B2A6NCE7 125 aa13.46□□□□□ -0.25
COMMD1-208ENST00000472729 ORM1P02763 201 aa13.46□□□□□ -0.25
COMMD1-208ENST00000472729 TYMSP04818 313 aa13.46□□□□□ -0.25
COMMD1-208ENST00000472729 SFTA3P0C7M3 94 aa13.46□□□□□ -0.25
COMMD1-208ENST00000472729 SRIP30626 198 aa13.46□□□□□ -0.25
COMMD1-208ENST00000472729 ZNF726P1Q15940 193 aa13.46□□□□□ -0.25
COMMD1-208ENST00000472729 NEGR1Q7Z3B1 354 aa13.46□□□□□ -0.25
COMMD1-208ENST00000472729 HIST1H2BAQ96A08 127 aa13.46□□□□□ -0.25
COMMD1-208ENST00000472729 ZNF479Q96JC4 524 aa13.46□□□□□ -0.25
COMMD1-208ENST00000472729 MAP1LC3BQ9GZQ8 125 aa13.46□□□□□ -0.25
COMMD1-208ENST00000472729 TRAV4A0A0B4J268 109 aa13.45□□□□□ -0.26
COMMD1-208ENST00000472729 A0A0D9SG52 128 aa13.45□□□□□ -0.26
COMMD1-208ENST00000472729 C9JCJ5 164 aa13.45□□□□□ -0.26
COMMD1-208ENST00000472729 EIF5AP63241 154 aaKnown RBP13.45□□□□□ -0.26
COMMD1-208ENST00000472729 ZNF345Q14585 488 aa13.45□□□□□ -0.26
COMMD1-208ENST00000472729 A0A1W2PPQ1 181 aa13.44□□□□□ -0.26
COMMD1-208ENST00000472729 G3V3Q6 166 aa13.44□□□□□ -0.26
COMMD1-208ENST00000472729 PEX7O00628 323 aa13.44□□□□□ -0.26
COMMD1-208ENST00000472729 S100A4P26447 101 aaKnown RBP13.44□□□□□ -0.26
COMMD1-208ENST00000472729 ZNF876PQ49A33 203 aa13.44□□□□□ -0.26
COMMD1-208ENST00000472729 CST9LP1Q5W188 147 aa13.44□□□□□ -0.26
COMMD1-208ENST00000472729 KCNRGQ8N5I3 272 aa13.44□□□□□ -0.26
COMMD1-208ENST00000472729 TXNDC17Q9BRA2 123 aa13.44□□□□□ -0.26
COMMD1-208ENST00000472729 ZNF471Q9BX82 626 aaPredicted RBP13.44□□□□□ -0.26
COMMD1-208ENST00000472729 CYTL1Q9NRR1 136 aa13.44□□□□□ -0.26
COMMD1-208ENST00000472729 DNAH6Q9C0G6 4158 aa13.43□□□□□ -0.26
COMMD1-208ENST00000472729 TRAV34A0A0B4J273 112 aa13.43□□□□□ -0.26
COMMD1-208ENST00000472729 SIVA1O15304 175 aa13.43□□□□□ -0.26
COMMD1-208ENST00000472729 PFDN1O60925 122 aa13.43□□□□□ -0.26
COMMD1-208ENST00000472729 UBE2G1P62253 170 aa13.43□□□□□ -0.26
COMMD1-208ENST00000472729 A0A1B0GVY2 172 aa13.42□□□□□ -0.26
COMMD1-208ENST00000472729 FAM74A7A6NL05 159 aa13.42□□□□□ -0.26
COMMD1-208ENST00000472729 HMSDA8MTL9 139 aa13.42□□□□□ -0.26
COMMD1-208ENST00000472729 FABP5P3A8MUU1 101 aa13.42□□□□□ -0.26
COMMD1-208ENST00000472729 UMAD1C9J7I0 102 aa13.42□□□□□ -0.26
COMMD1-208ENST00000472729 IGLV2-11P01706 119 aa13.42□□□□□ -0.26
COMMD1-208ENST00000472729 GYPEP15421 78 aa13.42□□□□□ -0.26
COMMD1-208ENST00000472729 ZNF80P51504 273 aaPredicted RBP13.42□□□□□ -0.26
COMMD1-208ENST00000472729 LINC00479Q96M42 142 aa13.42□□□□□ -0.26
COMMD1-208ENST00000472729 ARL2-SNX15V9GYD0 113 aa13.42□□□□□ -0.26
COMMD1-208ENST00000472729 TRAV9-2A0A087WT02 112 aa13.41□□□□□ -0.26
COMMD1-208ENST00000472729 CIDEAO60543 219 aa13.41□□□□□ -0.26
COMMD1-208ENST00000472729 NXPH4O95158 308 aa13.41□□□□□ -0.26
COMMD1-208ENST00000472729 SEC11BP0C7V7 166 aa13.41□□□□□ -0.26
COMMD1-208ENST00000472729 SH2D6Q7Z4S9 175 aa13.41□□□□□ -0.26
COMMD1-208ENST00000472729 FAM213BQ8TBF2 198 aa13.41□□□□□ -0.26
COMMD1-208ENST00000472729 SFT2D1Q8WV19 159 aa13.41□□□□□ -0.26
COMMD1-208ENST00000472729 TCEAL7Q9BRU2 100 aa13.41□□□□□ -0.26
COMMD1-208ENST00000472729 K7EQD1 137 aa13.4□□□□□ -0.26
COMMD1-208ENST00000472729 LYPD5Q6UWN5 251 aa13.4□□□□□ -0.26
COMMD1-208ENST00000472729 NHLRC2Q8NBF2 726 aa13.4□□□□□ -0.26
COMMD1-208ENST00000472729 FMC1Q96HJ9 113 aa13.4□□□□□ -0.26
COMMD1-208ENST00000472729 ZFP30Q9Y2G7 519 aa13.4□□□□□ -0.26
COMMD1-208ENST00000472729 BCL2L11O43521 198 aa13.39□□□□□ -0.27
COMMD1-208ENST00000472729 BTF3P20290 206 aaKnown RBP13.39□□□□□ -0.27
COMMD1-208ENST00000472729 ASIPP42127 132 aa13.39□□□□□ -0.27
COMMD1-208ENST00000472729 PRADC1Q9BSG0 188 aa13.39□□□□□ -0.27
COMMD1-208ENST00000472729 TNP2Q05952 138 aa13.38□□□□□ -0.27
COMMD1-208ENST00000472729 Q86TA4 180 aa13.38□□□□□ -0.27
COMMD1-208ENST00000472729 TPT1P13693 172 aaKnown RBP13.37□□□□□ -0.27
COMMD1-208ENST00000472729 AKR1C3P42330 323 aa13.37□□□□□ -0.27
COMMD1-208ENST00000472729 FHITP49789 147 aa13.37□□□□□ -0.27
COMMD1-208ENST00000472729 DPPA3Q6W0C5 159 aa13.37□□□□□ -0.27
COMMD1-208ENST00000472729 C11orf21Q9P2W6 132 aa13.37□□□□□ -0.27
COMMD1-208ENST00000472729 A0A1B0GV50 99 aa13.36□□□□□ -0.27
COMMD1-208ENST00000472729 B4DEV8 164 aa13.36□□□□□ -0.27
COMMD1-208ENST00000472729 MED14OSP0DP75 135 aa13.36□□□□□ -0.27
COMMD1-208ENST00000472729 EIF5AL1Q6IS14 154 aaKnown RBP13.36□□□□□ -0.27
COMMD1-208ENST00000472729 OR11H4Q8NGC9 324 aa13.36□□□□□ -0.27
COMMD1-208ENST00000472729 LY96Q9Y6Y9 160 aa13.36□□□□□ -0.27
COMMD1-208ENST00000472729 DNAH2Q9P225 4427 aa13.36□□□□□ -0.27
COMMD1-208ENST00000472729 IGHV3-73A0A0B4J1V6 119 aa13.35□□□□□ -0.27
COMMD1-208ENST00000472729 PAGE4O60829 102 aa13.35□□□□□ -0.27
COMMD1-208ENST00000472729 H2AFB1P0C5Y9 115 aa13.35□□□□□ -0.27
COMMD1-208ENST00000472729 EVI2AP22794 236 aa13.35□□□□□ -0.27
COMMD1-208ENST00000472729 LGALSLQ3ZCW2 172 aaPredicted RBP13.35□□□□□ -0.27
COMMD1-208ENST00000472729 FAM162BQ5T6X4 162 aa13.35□□□□□ -0.27
COMMD1-208ENST00000472729 SYT8Q8NBV8 401 aa13.35□□□□□ -0.27
COMMD1-208ENST00000472729 C9orf85Q96MD7 179 aa13.35□□□□□ -0.27
COMMD1-208ENST00000472729 RS1O15537 224 aa13.34□□□□□ -0.27
COMMD1-208ENST00000472729 S100A9P06702 114 aaKnown RBP13.34□□□□□ -0.27
COMMD1-208ENST00000472729 GATA1P15976 413 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms