RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 C8orf49Q96NF6 230 aa10.07□□□□□ -0.8
BRCA1-211ENST00000472490 SPXQ9BT56 116 aa10.07□□□□□ -0.8
BRCA1-211ENST00000472490 TP53TG3Q9ULZ0 132 aa10.07□□□□□ -0.8
BRCA1-211ENST00000472490 TRGV2A0A075B6R0 118 aa10.06□□□□□ -0.8
BRCA1-211ENST00000472490 TRGV1A0A0A0MS02 117 aa10.06□□□□□ -0.8
BRCA1-211ENST00000472490 GAGE12BA1L429 117 aa10.06□□□□□ -0.8
BRCA1-211ENST00000472490 FABP5P3A8MUU1 101 aa10.06□□□□□ -0.8
BRCA1-211ENST00000472490 GAGE7O76087 117 aa10.06□□□□□ -0.8
BRCA1-211ENST00000472490 GAGE12FP0CL80 117 aa10.06□□□□□ -0.8
BRCA1-211ENST00000472490 GAGE12GP0CL81 117 aa10.06□□□□□ -0.8
BRCA1-211ENST00000472490 GAGE12IP0CL82 117 aa10.06□□□□□ -0.8
BRCA1-211ENST00000472490 CCL20P78556 96 aa10.06□□□□□ -0.8
BRCA1-211ENST00000472490 TMEM183AQ8IXX5 376 aa10.06□□□□□ -0.8
BRCA1-211ENST00000472490 C18orf15Q96N68 181 aa10.06□□□□□ -0.8
BRCA1-211ENST00000472490 SCO2A0A1W2PP80 73 aa10.05□□□□□ -0.8
BRCA1-211ENST00000472490 F5H768 121 aa10.05□□□□□ -0.8
BRCA1-211ENST00000472490 PDE6DO43924 150 aa10.05□□□□□ -0.8
BRCA1-211ENST00000472490 SPINK4O60575 86 aa10.05□□□□□ -0.8
BRCA1-211ENST00000472490 LY6G6CO95867 125 aa10.05□□□□□ -0.8
BRCA1-211ENST00000472490 LTAP01374 205 aa10.05□□□□□ -0.8
BRCA1-211ENST00000472490 COX8CQ7Z4L0 72 aa10.05□□□□□ -0.8
BRCA1-211ENST00000472490 LINC00476Q8WZB0 136 aa10.05□□□□□ -0.8
BRCA1-211ENST00000472490 APLNQ9ULZ1 77 aa10.05□□□□□ -0.8
BRCA1-211ENST00000472490 ZNF80P51504 273 aaPredicted RBP10.04□□□□□ -0.8
BRCA1-211ENST00000472490 MEF2BQ02080 365 aaPredicted RBP10.04□□□□□ -0.8
BRCA1-211ENST00000472490 LCE2CQ5TA81 110 aa10.04□□□□□ -0.8
BRCA1-211ENST00000472490 LGALS9CQ6DKI2 356 aa10.04□□□□□ -0.8
BRCA1-211ENST00000472490 Q6ZTI0 123 aa10.04□□□□□ -0.8
BRCA1-211ENST00000472490 C15orf53Q8NAA6 179 aa10.04□□□□□ -0.8
BRCA1-211ENST00000472490 MDFICQ9P1T7 246 aa10.04□□□□□ -0.8
BRCA1-211ENST00000472490 VAX2Q9UIW0 290 aa10.04□□□□□ -0.8
BRCA1-211ENST00000472490 GNRH2O43555 120 aa10.03□□□□□ -0.8
BRCA1-211ENST00000472490 TYMSP04818 313 aa10.03□□□□□ -0.8
BRCA1-211ENST00000472490 BCL2P10415 239 aa10.03□□□□□ -0.8
BRCA1-211ENST00000472490 FAM162BQ5T6X4 162 aa10.03□□□□□ -0.8
BRCA1-211ENST00000472490 C11orf52Q96A22 123 aa10.03□□□□□ -0.8
BRCA1-211ENST00000472490 IGHV3-16A0A0C4DH30 117 aa10.02□□□□□ -0.81
BRCA1-211ENST00000472490 M0R2P5 195 aa10.02□□□□□ -0.81
BRCA1-211ENST00000472490 P0DMU3 169 aa10.02□□□□□ -0.81
BRCA1-211ENST00000472490 FAM231AP0DMU4 169 aa10.02□□□□□ -0.81
BRCA1-211ENST00000472490 FAM231CP0DMU5 169 aa10.02□□□□□ -0.81
BRCA1-211ENST00000472490 TMEM88Q6PEY1 159 aa10.02□□□□□ -0.81
BRCA1-211ENST00000472490 BAGE2Q86Y30 109 aa10.02□□□□□ -0.81
BRCA1-211ENST00000472490 DNAH7Q8WXX0 4024 aa10.01□□□□□ -0.81
BRCA1-211ENST00000472490 ORM1P02763 201 aa10.01□□□□□ -0.81
BRCA1-211ENST00000472490 OR5I1Q13606 314 aa10.01□□□□□ -0.81
BRCA1-211ENST00000472490 RASL10AQ92737 203 aa10.01□□□□□ -0.81
BRCA1-211ENST00000472490 ZC2HC1AQ96GY0 325 aa10.01□□□□□ -0.81
BRCA1-211ENST00000472490 MRPL16Q9NX20 251 aaKnown RBP10.01□□□□□ -0.81
BRCA1-211ENST00000472490 CSMD3Q7Z407 3707 aa10□□□□□ -0.81
BRCA1-211ENST00000472490 S100A4P26447 101 aaKnown RBP10□□□□□ -0.81
BRCA1-211ENST00000472490 RPL35P42766 123 aaKnown RBP10□□□□□ -0.81
BRCA1-211ENST00000472490 SLAQ13239 276 aa10□□□□□ -0.81
BRCA1-211ENST00000472490 ZNF674Q2M3X9 581 aa10□□□□□ -0.81
BRCA1-211ENST00000472490 LYPD6BQ8NI32 183 aa10□□□□□ -0.81
BRCA1-211ENST00000472490 SMIM12Q96EX1 92 aa10□□□□□ -0.81
BRCA1-211ENST00000472490 C11orf21Q9P2W6 132 aa10□□□□□ -0.81
BRCA1-211ENST00000472490 B4DEV8 164 aa9.99□□□□□ -0.81
BRCA1-211ENST00000472490 H3BNG1 76 aa9.99□□□□□ -0.81
BRCA1-211ENST00000472490 SH2D1AO60880 128 aa9.99□□□□□ -0.81
BRCA1-211ENST00000472490 ASIPP42127 132 aa9.99□□□□□ -0.81
BRCA1-211ENST00000472490 MLST8Q9BVC4 326 aa9.99□□□□□ -0.81
BRCA1-211ENST00000472490 MED9Q9NWA0 146 aa9.99□□□□□ -0.81
BRCA1-211ENST00000472490 TRAV26-1A0A087WT03 109 aa9.98□□□□□ -0.81
BRCA1-211ENST00000472490 IGKV3D-20A0A0C4DH25 116 aa9.98□□□□□ -0.81
BRCA1-211ENST00000472490 CRIP1P50238 77 aa9.98□□□□□ -0.81
BRCA1-211ENST00000472490 BIN3Q9NQY0 253 aa9.98□□□□□ -0.81
BRCA1-211ENST00000472490 STARD9Q9P2P6 4700 aa9.98□□□□□ -0.81
BRCA1-211ENST00000472490 RBFOX3A6NFN3 312 aa9.97□□□□□ -0.81
BRCA1-211ENST00000472490 KRBOX1C9JBD0 128 aa9.97□□□□□ -0.81
BRCA1-211ENST00000472490 CIDEAO60543 219 aa9.97□□□□□ -0.81
BRCA1-211ENST00000472490 NUDT3O95989 172 aa9.97□□□□□ -0.81
BRCA1-211ENST00000472490 HOXA5P20719 270 aa9.97□□□□□ -0.81
BRCA1-211ENST00000472490 GNG4P50150 75 aa9.97□□□□□ -0.81
BRCA1-211ENST00000472490 ZNF876PQ49A33 203 aa9.97□□□□□ -0.81
BRCA1-211ENST00000472490 TEX261Q6UWH6 196 aa9.97□□□□□ -0.81
BRCA1-211ENST00000472490 NHLRC2Q8NBF2 726 aa9.97□□□□□ -0.81
BRCA1-211ENST00000472490 PTH2Q96A98 100 aa9.97□□□□□ -0.81
BRCA1-211ENST00000472490 C9orf85Q96MD7 179 aa9.97□□□□□ -0.81
BRCA1-211ENST00000472490 PRO0255Q9UI72 69 aa9.97□□□□□ -0.81
BRCA1-211ENST00000472490 TRAV4A0A0B4J268 109 aa9.96□□□□□ -0.82
BRCA1-211ENST00000472490 TRGV4A0A0C4DH28 118 aa9.96□□□□□ -0.82
BRCA1-211ENST00000472490 C9JCJ5 164 aa9.96□□□□□ -0.82
BRCA1-211ENST00000472490 M0R036 132 aa9.96□□□□□ -0.82
BRCA1-211ENST00000472490 IGHV3-53P01767 116 aa9.96□□□□□ -0.82
BRCA1-211ENST00000472490 CENPWQ5EE01 88 aa9.96□□□□□ -0.82
BRCA1-211ENST00000472490 PIK3CD-AS1Q5SR53 167 aa9.96□□□□□ -0.82
BRCA1-211ENST00000472490 UBE2DNLQ8IWF7 75 aa9.96□□□□□ -0.82
BRCA1-211ENST00000472490 OR4C5Q8NGB2 326 aa9.96□□□□□ -0.82
BRCA1-211ENST00000472490 DERL1Q9BUN8 251 aa9.96□□□□□ -0.82
BRCA1-211ENST00000472490 EIF5A2Q9GZV4 153 aaKnown RBP9.96□□□□□ -0.82
BRCA1-211ENST00000472490 IL36BQ9NZH7 164 aa9.96□□□□□ -0.82
BRCA1-211ENST00000472490 TMEM250H0YL14 139 aa9.95□□□□□ -0.82
BRCA1-211ENST00000472490 RNASE3P12724 160 aaKnown RBP9.95□□□□□ -0.82
BRCA1-211ENST00000472490 RNF212Q495C1 297 aa9.95□□□□□ -0.82
BRCA1-211ENST00000472490 ZNF506Q5JVG8 444 aa9.95□□□□□ -0.82
BRCA1-211ENST00000472490 DNLZQ5SXM8 178 aa9.95□□□□□ -0.82
BRCA1-211ENST00000472490 PRR27Q6MZM9 219 aa9.95□□□□□ -0.82
BRCA1-211ENST00000472490 POM121L12Q8N7R1 296 aa9.95□□□□□ -0.82
BRCA1-211ENST00000472490 SYT8Q8NBV8 401 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms