RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 HLA-DMBP28068 263 aa3.29□□□□□ -1.88
LMNB1-205ENST00000472034 SLC25A1P53007 311 aa3.29□□□□□ -1.88
LMNB1-205ENST00000472034 HERVK_113P63121 156 aa3.29□□□□□ -1.88
LMNB1-205ENST00000472034 SRSF9Q13242 221 aaKnown RBP eCLIP3.29□□□□□ -1.88
LMNB1-205ENST00000472034 IL15RAQ13261 267 aa3.29□□□□□ -1.88
LMNB1-205ENST00000472034 TWIST1Q15672 202 aa3.29□□□□□ -1.88
LMNB1-205ENST00000472034 MSMO1Q15800 293 aa3.29□□□□□ -1.88
LMNB1-205ENST00000472034 MRPL2Q5T653 305 aaKnown RBP3.29□□□□□ -1.88
LMNB1-205ENST00000472034 LCN12Q6JVE5 192 aa3.29□□□□□ -1.88
LMNB1-205ENST00000472034 CEMP1Q6PRD7 247 aaPredicted RBP3.29□□□□□ -1.88
LMNB1-205ENST00000472034 SLC25A47Q6Q0C1 308 aa3.29□□□□□ -1.88
LMNB1-205ENST00000472034 Q6ZRG5 221 aa3.29□□□□□ -1.88
LMNB1-205ENST00000472034 C15orf53Q8NAA6 179 aa3.29□□□□□ -1.88
LMNB1-205ENST00000472034 OR2AJ1Q8NGZ0 328 aa3.29□□□□□ -1.88
LMNB1-205ENST00000472034 OR4K13Q8NH42 304 aa3.29□□□□□ -1.88
LMNB1-205ENST00000472034 RPS4Y2Q8TD47 263 aa3.29□□□□□ -1.88
LMNB1-205ENST00000472034 PPDPFLQ8WWR9 84 aa3.29□□□□□ -1.88
LMNB1-205ENST00000472034 DPH3Q96FX2 82 aa3.29□□□□□ -1.88
LMNB1-205ENST00000472034 RNASE7Q9H1E1 156 aaKnown RBP3.29□□□□□ -1.88
LMNB1-205ENST00000472034 REEP1Q9H902 201 aa3.29□□□□□ -1.88
LMNB1-205ENST00000472034 SDR39U1Q9NRG7 319 aaPredicted RBP3.29□□□□□ -1.88
LMNB1-205ENST00000472034 ZNF581Q9P0T4 197 aa3.29□□□□□ -1.88
LMNB1-205ENST00000472034 KLHDC2Q9Y2U9 406 aa3.29□□□□□ -1.88
LMNB1-205ENST00000472034 PXMP4Q9Y6I8 212 aa3.29□□□□□ -1.88
LMNB1-205ENST00000472034 TRBV19A0A075B6N1 114 aa3.28□□□□□ -1.88
LMNB1-205ENST00000472034 MUC21A0A0G2JKD1 596 aa3.28□□□□□ -1.88
LMNB1-205ENST00000472034 MUC21A0A140T8X8 626 aa3.28□□□□□ -1.88
LMNB1-205ENST00000472034 FAM236DA0A1B0GTK5 79 aa3.28□□□□□ -1.88
LMNB1-205ENST00000472034 FAM240AA0A1B0GVK7 77 aa3.28□□□□□ -1.88
LMNB1-205ENST00000472034 FCN1O00602 326 aa3.28□□□□□ -1.88
LMNB1-205ENST00000472034 GNGT2O14610 69 aa3.28□□□□□ -1.88
LMNB1-205ENST00000472034 ZNF737O75373 536 aa3.28□□□□□ -1.88
LMNB1-205ENST00000472034 SNCGO76070 127 aa3.28□□□□□ -1.88
LMNB1-205ENST00000472034 MT-ND6P03923 174 aa3.28□□□□□ -1.88
LMNB1-205ENST00000472034 HMGN2P05204 90 aaKnown RBP3.28□□□□□ -1.88
LMNB1-205ENST00000472034 SRP19P09132 144 aaKnown RBP3.28□□□□□ -1.88
LMNB1-205ENST00000472034 FAM236CP0DP71 79 aa3.28□□□□□ -1.88
LMNB1-205ENST00000472034 PRB4P10163 310 aaPredicted RBP3.28□□□□□ -1.88
LMNB1-205ENST00000472034 HLA-DOBP13765 273 aa3.28□□□□□ -1.88
LMNB1-205ENST00000472034 UBE2E1P51965 193 aa3.28□□□□□ -1.88
LMNB1-205ENST00000472034 C12orf74Q32Q52 190 aa3.28□□□□□ -1.88
LMNB1-205ENST00000472034 Q56UQ5 140 aa3.28□□□□□ -1.88
LMNB1-205ENST00000472034 MUC21Q5SSG8 566 aa3.28□□□□□ -1.88
LMNB1-205ENST00000472034 Q6ZS49 121 aa3.28□□□□□ -1.88
LMNB1-205ENST00000472034 MRPL55Q7Z7F7 128 aaKnown RBP3.28□□□□□ -1.88
LMNB1-205ENST00000472034 HAPLN4Q86UW8 402 aa3.28□□□□□ -1.88
LMNB1-205ENST00000472034 PRR15Q8IV56 129 aa3.28□□□□□ -1.88
LMNB1-205ENST00000472034 SGPP2Q8IWX5 399 aa3.28□□□□□ -1.88
LMNB1-205ENST00000472034 MSRB3Q8IXL7 192 aa3.28□□□□□ -1.88
LMNB1-205ENST00000472034 OR5AS1Q8N127 324 aa3.28□□□□□ -1.88
LMNB1-205ENST00000472034 LY6G5BQ8NDX9 201 aa3.28□□□□□ -1.88
LMNB1-205ENST00000472034 STAG3L4Q8TBR4 150 aa3.28□□□□□ -1.88
LMNB1-205ENST00000472034 MRPL30Q8TCC3 161 aaKnown RBP3.28□□□□□ -1.88
LMNB1-205ENST00000472034 GTSF1Q8WW33 167 aa3.28□□□□□ -1.88
LMNB1-205ENST00000472034 FMC1Q96HJ9 113 aa3.28□□□□□ -1.88
LMNB1-205ENST00000472034 POLR2J2Q9GZM3 115 aaKnown RBP3.28□□□□□ -1.88
LMNB1-205ENST00000472034 Q9H8V8 135 aa3.28□□□□□ -1.88
LMNB1-205ENST00000472034 SDF2L1Q9HCN8 221 aa3.28□□□□□ -1.88
LMNB1-205ENST00000472034 TECRQ9NZ01 308 aaKnown RBP3.28□□□□□ -1.88
LMNB1-205ENST00000472034 PRO0461Q9UI25 63 aa3.28□□□□□ -1.88
LMNB1-205ENST00000472034 DNAJC15Q9Y5T4 150 aa3.28□□□□□ -1.88
LMNB1-205ENST00000472034 IGHV3OR15-7A0A075B7D8 119 aa3.27□□□□□ -1.89
LMNB1-205ENST00000472034 TRAV4A0A0B4J268 109 aa3.27□□□□□ -1.89
LMNB1-205ENST00000472034 LOC107984640A0A0U1RRK4 108 aa3.27□□□□□ -1.89
LMNB1-205ENST00000472034 TMEM272A0A1B0GTI8 110 aa3.27□□□□□ -1.89
LMNB1-205ENST00000472034 IZUMO1RA6ND01 250 aa3.27□□□□□ -1.89
LMNB1-205ENST00000472034 NUPR2A6NF83 97 aa3.27□□□□□ -1.89
LMNB1-205ENST00000472034 C16orf90A8MZG2 172 aa3.27□□□□□ -1.89
LMNB1-205ENST00000472034 ZNF732B4DXR9 585 aa3.27□□□□□ -1.89
LMNB1-205ENST00000472034 BUB3O43684 328 aa3.27□□□□□ -1.89
LMNB1-205ENST00000472034 H1F0P07305 194 aaKnown RBP3.27□□□□□ -1.89
LMNB1-205ENST00000472034 VDAC1P21796 283 aa3.27□□□□□ -1.89
LMNB1-205ENST00000472034 PFN2P35080 140 aa3.27□□□□□ -1.89
LMNB1-205ENST00000472034 DAPP51397 102 aa3.27□□□□□ -1.89
LMNB1-205ENST00000472034 QRFPP83859 136 aa3.27□□□□□ -1.89
LMNB1-205ENST00000472034 KIAA1644Q3SXP7 199 aa3.27□□□□□ -1.89
LMNB1-205ENST00000472034 LINC01545Q5VT33 79 aa3.27□□□□□ -1.89
LMNB1-205ENST00000472034 HRCT1Q6UXD1 115 aa3.27□□□□□ -1.89
LMNB1-205ENST00000472034 CYP2G1PQ6ZSU1 146 aa3.27□□□□□ -1.89
LMNB1-205ENST00000472034 Q6ZVH6 145 aa3.27□□□□□ -1.89
LMNB1-205ENST00000472034 SLC22A24Q8N4F4 322 aa3.27□□□□□ -1.89
LMNB1-205ENST00000472034 OR10G8Q8NGN5 311 aa3.27□□□□□ -1.89
LMNB1-205ENST00000472034 PPP1R1CQ8WVI7 109 aa3.27□□□□□ -1.89
LMNB1-205ENST00000472034 LSM10Q969L4 123 aaKnown RBP3.27□□□□□ -1.89
LMNB1-205ENST00000472034 TMEM59Q9BXS4 323 aa3.27□□□□□ -1.89
LMNB1-205ENST00000472034 EIF5A2Q9GZV4 153 aaKnown RBP3.27□□□□□ -1.89
LMNB1-205ENST00000472034 C21orf62Q9NYP8 219 aa3.27□□□□□ -1.89
LMNB1-205ENST00000472034 PYGO1Q9Y3Y4 419 aa3.27□□□□□ -1.89
LMNB1-205ENST00000472034 TRAV12-2A0A075B6T6 113 aa3.26□□□□□ -1.89
LMNB1-205ENST00000472034 IGLV1-36A0A0B4J1U3 117 aa3.26□□□□□ -1.89
LMNB1-205ENST00000472034 TRAV1-2A0A0B4J238 106 aa3.26□□□□□ -1.89
LMNB1-205ENST00000472034 E9PLD3 99 aa3.26□□□□□ -1.89
LMNB1-205ENST00000472034 C11orf98E9PRG8 122 aa3.26□□□□□ -1.89
LMNB1-205ENST00000472034 SPINT2O43291 252 aa3.26□□□□□ -1.89
LMNB1-205ENST00000472034 APOMO95445 188 aa3.26□□□□□ -1.89
LMNB1-205ENST00000472034 FSTL3O95633 263 aa3.26□□□□□ -1.89
LMNB1-205ENST00000472034 TFF1P04155 84 aa3.26□□□□□ -1.89
LMNB1-205ENST00000472034 IGKV2-30P06310 120 aa3.26□□□□□ -1.89
LMNB1-205ENST00000472034 PSMB3P49720 205 aa3.26□□□□□ -1.89
LMNB1-205ENST00000472034 FOXA3P55318 350 aaPredicted RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 192 ms