RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 UQCC1Q9NVA1 299 aa12.35□□□□□ -0.43
SORT1-203ENST00000471996 GGTLC3B5MD39 225 aa12.34□□□□□ -0.43
SORT1-203ENST00000471996 GNRH2O43555 120 aa12.34□□□□□ -0.43
SORT1-203ENST00000471996 ASIPP42127 132 aa12.34□□□□□ -0.43
SORT1-203ENST00000471996 GSKIPQ9P0R6 139 aa12.34□□□□□ -0.43
SORT1-203ENST00000471996 NAGKQ9UJ70 344 aa12.34□□□□□ -0.43
SORT1-203ENST00000471996 RBAKDNA6NC62 111 aa12.33□□□□□ -0.44
SORT1-203ENST00000471996 MBPP02686 304 aaPredicted RBP12.33□□□□□ -0.44
SORT1-203ENST00000471996 NBEAP1P0C6P0 100 aa12.33□□□□□ -0.44
SORT1-203ENST00000471996 Q6ZRU5 148 aa12.33□□□□□ -0.44
SORT1-203ENST00000471996 RMI2Q96E14 147 aa12.33□□□□□ -0.44
SORT1-203ENST00000471996 SLC25A2Q9BXI2 301 aa12.33□□□□□ -0.44
SORT1-203ENST00000471996 CIDEAO60543 219 aa12.32□□□□□ -0.44
SORT1-203ENST00000471996 CST7O76096 145 aa12.32□□□□□ -0.44
SORT1-203ENST00000471996 VWC2Q2TAL6 325 aa12.32□□□□□ -0.44
SORT1-203ENST00000471996 CHAC2Q8WUX2 184 aa12.32□□□□□ -0.44
SORT1-203ENST00000471996 FAM167A-AS1Q96KT0 104 aa12.32□□□□□ -0.44
SORT1-203ENST00000471996 LENEPQ9Y5L5 61 aa12.32□□□□□ -0.44
SORT1-203ENST00000471996 TRAV8-1A0A0A6YYK1 113 aa12.31□□□□□ -0.44
SORT1-203ENST00000471996 L7N2F9 121 aa12.31□□□□□ -0.44
SORT1-203ENST00000471996 VAMP2P63027 116 aa12.31□□□□□ -0.44
SORT1-203ENST00000471996 BAXQ07812 192 aa12.31□□□□□ -0.44
SORT1-203ENST00000471996 CFAP126Q5VTH2 177 aa12.31□□□□□ -0.44
SORT1-203ENST00000471996 MZT2BQ6NZ67 158 aa12.31□□□□□ -0.44
SORT1-203ENST00000471996 PAXXQ9BUH6 204 aa12.31□□□□□ -0.44
SORT1-203ENST00000471996 SH3BGRL3Q9H299 93 aa12.31□□□□□ -0.44
SORT1-203ENST00000471996 IGKV2D-24A0A075B6R9 120 aa12.3□□□□□ -0.44
SORT1-203ENST00000471996 UBE2L5PA0A1B0GUS4 154 aa12.3□□□□□ -0.44
SORT1-203ENST00000471996 FAM240BA0A1B0GVZ2 78 aa12.3□□□□□ -0.44
SORT1-203ENST00000471996 CSN1S1P47710 185 aa12.3□□□□□ -0.44
SORT1-203ENST00000471996 BCAP31P51572 246 aa12.3□□□□□ -0.44
SORT1-203ENST00000471996 GCSAMLQ5JQS6 135 aa12.3□□□□□ -0.44
SORT1-203ENST00000471996 TRAV6A0A075B6T7 132 aa12.29□□□□□ -0.44
SORT1-203ENST00000471996 C5orf51A6NDU8 294 aa12.29□□□□□ -0.44
SORT1-203ENST00000471996 A6NHS1 94 aa12.29□□□□□ -0.44
SORT1-203ENST00000471996 TYMSP04818 313 aa12.29□□□□□ -0.44
SORT1-203ENST00000471996 H2AFB2P0C5Z0 115 aa12.29□□□□□ -0.44
SORT1-203ENST00000471996 CAV2P51636 162 aa12.29□□□□□ -0.44
SORT1-203ENST00000471996 PHYHIPLQ96FC7 376 aa12.29□□□□□ -0.44
SORT1-203ENST00000471996 DNAJC30Q96LL9 226 aa12.29□□□□□ -0.44
SORT1-203ENST00000471996 OR51M1Q9H341 326 aa12.29□□□□□ -0.44
SORT1-203ENST00000471996 NUDT15Q9NV35 164 aa12.29□□□□□ -0.44
SORT1-203ENST00000471996 RPH3ALQ9UNE2 315 aa12.29□□□□□ -0.44
SORT1-203ENST00000471996 IGHV3-73A0A0B4J1V6 119 aa12.28□□□□□ -0.44
SORT1-203ENST00000471996 OR10J4P0C629 311 aa12.28□□□□□ -0.44
SORT1-203ENST00000471996 ZNF876PQ49A33 203 aa12.28□□□□□ -0.44
SORT1-203ENST00000471996 DPPA3Q6W0C5 159 aa12.28□□□□□ -0.44
SORT1-203ENST00000471996 MIR17HGQ75NE6 70 aa12.28□□□□□ -0.44
SORT1-203ENST00000471996 FXYD5Q96DB9 178 aa12.28□□□□□ -0.44
SORT1-203ENST00000471996 ATP5SQ99766 215 aa12.28□□□□□ -0.44
SORT1-203ENST00000471996 FAM24AA6NFZ4 105 aa12.27□□□□□ -0.45
SORT1-203ENST00000471996 C2orf50Q96LR7 162 aa12.27□□□□□ -0.45
SORT1-203ENST00000471996 TRAV21A0A0B4J279 112 aa12.26□□□□□ -0.45
SORT1-203ENST00000471996 MGST1P10620 155 aaKnown RBP12.26□□□□□ -0.45
SORT1-203ENST00000471996 FGF7P21781 194 aa12.26□□□□□ -0.45
SORT1-203ENST00000471996 S100A11P31949 105 aa12.26□□□□□ -0.45
SORT1-203ENST00000471996 C11orf1Q9H5F2 150 aa12.26□□□□□ -0.45
SORT1-203ENST00000471996 SDF2L1Q9HCN8 221 aa12.26□□□□□ -0.45
SORT1-203ENST00000471996 DIRC3C9JPN6 131 aa12.25□□□□□ -0.45
SORT1-203ENST00000471996 PVALBP20472 110 aaPredicted RBP12.25□□□□□ -0.45
SORT1-203ENST00000471996 RANP62826 216 aaKnown RBP12.25□□□□□ -0.45
SORT1-203ENST00000471996 TMED6Q8WW62 240 aa12.25□□□□□ -0.45
SORT1-203ENST00000471996 SEC22CQ9BRL7 303 aa12.25□□□□□ -0.45
SORT1-203ENST00000471996 LSM5Q9Y4Y9 91 aaKnown RBP12.25□□□□□ -0.45
SORT1-203ENST00000471996 FAM25EA8MYX2 175 aa12.24□□□□□ -0.45
SORT1-203ENST00000471996 CCSO14618 274 aa12.24□□□□□ -0.45
SORT1-203ENST00000471996 SEC11BP0C7V7 166 aa12.24□□□□□ -0.45
SORT1-203ENST00000471996 LINC00694P0DN24 101 aa12.24□□□□□ -0.45
SORT1-203ENST00000471996 C14orf177Q52M58 125 aa12.24□□□□□ -0.45
SORT1-203ENST00000471996 KCNS1Q96KK3 526 aa12.24□□□□□ -0.45
SORT1-203ENST00000471996 A0A087WWC5 75 aa12.23□□□□□ -0.45
SORT1-203ENST00000471996 GAGE12JA6NER3 117 aa12.23□□□□□ -0.45
SORT1-203ENST00000471996 UPK1BO75841 260 aa12.23□□□□□ -0.45
SORT1-203ENST00000471996 SULT1A1P50225 295 aa12.23□□□□□ -0.45
SORT1-203ENST00000471996 GAGE1Q13065 139 aa12.23□□□□□ -0.45
SORT1-203ENST00000471996 GAGE4Q13068 117 aa12.23□□□□□ -0.45
SORT1-203ENST00000471996 GAGE5Q13069 117 aa12.23□□□□□ -0.45
SORT1-203ENST00000471996 GAGE13Q4V321 117 aa12.23□□□□□ -0.45
SORT1-203ENST00000471996 NPCDR1Q9BY65 106 aa12.23□□□□□ -0.45
SORT1-203ENST00000471996 KLK12Q9UKR0 248 aa12.23□□□□□ -0.45
SORT1-203ENST00000471996 URGCP-MRPS24S4R325 110 aa12.23□□□□□ -0.45
SORT1-203ENST00000471996 ATRAIDQ6UW56 229 aa12.22□□□□□ -0.45
SORT1-203ENST00000471996 CYB561D1Q8N8Q1 229 aa12.22□□□□□ -0.45
SORT1-203ENST00000471996 ENKURQ8TC29 256 aa12.22□□□□□ -0.45
SORT1-203ENST00000471996 ASB13Q8WXK3 278 aa12.22□□□□□ -0.45
SORT1-203ENST00000471996 UBE2WQ96B02 151 aa12.22□□□□□ -0.45
SORT1-203ENST00000471996 HBG1P69891 147 aa12.21□□□□□ -0.45
SORT1-203ENST00000471996 HBG2P69892 147 aa12.21□□□□□ -0.45
SORT1-203ENST00000471996 IL15RAQ13261 267 aa12.21□□□□□ -0.45
SORT1-203ENST00000471996 ATP6V1FQ16864 119 aa12.21□□□□□ -0.45
SORT1-203ENST00000471996 NIT1Q86X76 327 aa12.21□□□□□ -0.45
SORT1-203ENST00000471996 BATF3Q9NR55 127 aa12.21□□□□□ -0.45
SORT1-203ENST00000471996 LYRM2Q9NU23 88 aaPredicted RBP12.21□□□□□ -0.45
SORT1-203ENST00000471996 IGSF23A1L1A6 192 aa12.2□□□□□ -0.46
SORT1-203ENST00000471996 STX12Q86Y82 276 aa12.2□□□□□ -0.46
SORT1-203ENST00000471996 TMEM252Q8N6L7 170 aa12.2□□□□□ -0.46
SORT1-203ENST00000471996 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.2□□□□□ -0.46
SORT1-203ENST00000471996 A0A0D9SG52 128 aa12.19□□□□□ -0.46
SORT1-203ENST00000471996 F6UZH7 168 aa12.19□□□□□ -0.46
SORT1-203ENST00000471996 OR7C2O60412 319 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms