RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.45□□□□□ -1.54
USP48-207ENST00000471752 IGLV2-11P01706 119 aa5.45□□□□□ -1.54
USP48-207ENST00000471752 TYMSP04818 313 aa5.45□□□□□ -1.54
USP48-207ENST00000471752 LINC00299Q6ZSB3 139 aa5.45□□□□□ -1.54
USP48-207ENST00000471752 Q6ZSN1 163 aa5.45□□□□□ -1.54
USP48-207ENST00000471752 OR10G4Q8NGN3 311 aa5.45□□□□□ -1.54
USP48-207ENST00000471752 RASL10AQ92737 203 aa5.45□□□□□ -1.54
USP48-207ENST00000471752 LINC00479Q96M42 142 aa5.45□□□□□ -1.54
USP48-207ENST00000471752 ARPC5LQ9BPX5 153 aa5.45□□□□□ -1.54
USP48-207ENST00000471752 OTORQ9NRC9 128 aa5.45□□□□□ -1.54
USP48-207ENST00000471752 ALG5Q9Y673 324 aa5.45□□□□□ -1.54
USP48-207ENST00000471752 FAT3Q8TDW7 4589 aa5.44□□□□□ -1.54
USP48-207ENST00000471752 A0A087WTM6 91 aa5.44□□□□□ -1.54
USP48-207ENST00000471752 TRGV4A0A0C4DH28 118 aa5.44□□□□□ -1.54
USP48-207ENST00000471752 RBAKDNA6NC62 111 aa5.44□□□□□ -1.54
USP48-207ENST00000471752 C17orf112F2Z3M2 114 aa5.44□□□□□ -1.54
USP48-207ENST00000471752 SMR3BP02814 79 aaPredicted RBP5.44□□□□□ -1.54
USP48-207ENST00000471752 CYCSP99999 105 aaKnown RBP5.44□□□□□ -1.54
USP48-207ENST00000471752 ZNF415Q09FC8 603 aa5.44□□□□□ -1.54
USP48-207ENST00000471752 MRPL23Q16540 153 aaKnown RBP5.44□□□□□ -1.54
USP48-207ENST00000471752 TTC32Q5I0X7 151 aa5.44□□□□□ -1.54
USP48-207ENST00000471752 IQCF2Q8IXL9 164 aa5.44□□□□□ -1.54
USP48-207ENST00000471752 LYPD1Q8N2G4 141 aa5.44□□□□□ -1.54
USP48-207ENST00000471752 HSD17B11Q8NBQ5 300 aa5.44□□□□□ -1.54
USP48-207ENST00000471752 OR10G9Q8NGN4 311 aa5.44□□□□□ -1.54
USP48-207ENST00000471752 OR10G7Q8NGN6 311 aa5.44□□□□□ -1.54
USP48-207ENST00000471752 SCGB1C1Q8TD33 95 aa5.44□□□□□ -1.54
USP48-207ENST00000471752 SH3BGRL3Q9H299 93 aa5.44□□□□□ -1.54
USP48-207ENST00000471752 TRBV7-9A0A0J9YWB2 115 aa5.43□□□□□ -1.54
USP48-207ENST00000471752 C9JCJ5 164 aa5.43□□□□□ -1.54
USP48-207ENST00000471752 IFNA5P01569 189 aa5.43□□□□□ -1.54
USP48-207ENST00000471752 ARL14EPLP0DKL9 152 aa5.43□□□□□ -1.54
USP48-207ENST00000471752 CSN1S1P47710 185 aa5.43□□□□□ -1.54
USP48-207ENST00000471752 TDRG1Q3Y452 100 aa5.43□□□□□ -1.54
USP48-207ENST00000471752 FAM159AQ6UWV7 190 aa5.43□□□□□ -1.54
USP48-207ENST00000471752 NEGR1Q7Z3B1 354 aa5.43□□□□□ -1.54
USP48-207ENST00000471752 JPT2Q9H910 190 aa5.43□□□□□ -1.54
USP48-207ENST00000471752 TREM1Q9NP99 234 aa5.43□□□□□ -1.54
USP48-207ENST00000471752 PTTG2Q9NZH5 202 aa5.43□□□□□ -1.54
USP48-207ENST00000471752 TRAV34A0A0B4J273 112 aa5.42□□□□□ -1.54
USP48-207ENST00000471752 KRTAP9-6A0A140TA67 174 aa5.42□□□□□ -1.54
USP48-207ENST00000471752 PGPEP1LA6NFU8 196 aa5.42□□□□□ -1.54
USP48-207ENST00000471752 GATA1P15976 413 aaPredicted RBP5.42□□□□□ -1.54
USP48-207ENST00000471752 ATP6V0CP27449 155 aa5.42□□□□□ -1.54
USP48-207ENST00000471752 WFDC2Q14508 124 aa5.42□□□□□ -1.54
USP48-207ENST00000471752 ZNF726P1Q15940 193 aa5.42□□□□□ -1.54
USP48-207ENST00000471752 KHDC3LQ587J8 217 aa5.42□□□□□ -1.54
USP48-207ENST00000471752 CFAP126Q5VTH2 177 aa5.42□□□□□ -1.54
USP48-207ENST00000471752 SLC25A29Q8N8R3 303 aa5.42□□□□□ -1.54
USP48-207ENST00000471752 OR4C5Q8NGB2 326 aa5.42□□□□□ -1.54
USP48-207ENST00000471752 RAB24Q969Q5 203 aa5.42□□□□□ -1.54
USP48-207ENST00000471752 DNAJC30Q96LL9 226 aa5.42□□□□□ -1.54
USP48-207ENST00000471752 SPXQ9BT56 116 aa5.42□□□□□ -1.54
USP48-207ENST00000471752 TRAV4A0A0B4J268 109 aa5.41□□□□□ -1.54
USP48-207ENST00000471752 LRCOL1A6NCL2 159 aa5.41□□□□□ -1.54
USP48-207ENST00000471752 GGTLC3B5MD39 225 aa5.41□□□□□ -1.54
USP48-207ENST00000471752 M0R2P5 195 aa5.41□□□□□ -1.54
USP48-207ENST00000471752 TCRAP04437 139 aa5.41□□□□□ -1.54
USP48-207ENST00000471752 STAG3L2P0CL84 134 aa5.41□□□□□ -1.54
USP48-207ENST00000471752 STAG3L3P0CL85 134 aa5.41□□□□□ -1.54
USP48-207ENST00000471752 GCHFRP30047 84 aa5.41□□□□□ -1.54
USP48-207ENST00000471752 SRIP30626 198 aa5.41□□□□□ -1.54
USP48-207ENST00000471752 CRIP1P50238 77 aa5.41□□□□□ -1.54
USP48-207ENST00000471752 SUMO1P63165 101 aaKnown RBP5.41□□□□□ -1.54
USP48-207ENST00000471752 ACOT6Q3I5F7 207 aaPredicted RBP5.41□□□□□ -1.54
USP48-207ENST00000471752 SUN5Q8TC36 379 aa5.41□□□□□ -1.54
USP48-207ENST00000471752 TMED6Q8WW62 240 aa5.41□□□□□ -1.54
USP48-207ENST00000471752 MSRB1Q9NZV6 116 aa5.41□□□□□ -1.54
USP48-207ENST00000471752 FAM30AQ9NZY2 134 aa5.41□□□□□ -1.54
USP48-207ENST00000471752 PSG8Q9UQ74 426 aa5.41□□□□□ -1.54
USP48-207ENST00000471752 LY96Q9Y6Y9 160 aa5.41□□□□□ -1.54
USP48-207ENST00000471752 TRGV11A0A075B6L2 103 aa5.4□□□□□ -1.54
USP48-207ENST00000471752 TRAV21A0A0B4J279 112 aa5.4□□□□□ -1.54
USP48-207ENST00000471752 IGKV3D-20A0A0C4DH25 116 aa5.4□□□□□ -1.54
USP48-207ENST00000471752 A0A1W2PPV4 95 aa5.4□□□□□ -1.54
USP48-207ENST00000471752 G3V3Q6 166 aa5.4□□□□□ -1.54
USP48-207ENST00000471752 RS1O15537 224 aa5.4□□□□□ -1.54
USP48-207ENST00000471752 GCGP01275 180 aa5.4□□□□□ -1.54
USP48-207ENST00000471752 IGHV3-30P01768 117 aa5.4□□□□□ -1.54
USP48-207ENST00000471752 IGHV3-33P01772 117 aa5.4□□□□□ -1.54
USP48-207ENST00000471752 CRYGDP07320 174 aa5.4□□□□□ -1.54
USP48-207ENST00000471752 IGHV3-30-3P0DP02 117 aa5.4□□□□□ -1.54
USP48-207ENST00000471752 IGHV3-30-5P0DP03 117 aa5.4□□□□□ -1.54
USP48-207ENST00000471752 RNASE3P12724 160 aaKnown RBP5.4□□□□□ -1.54
USP48-207ENST00000471752 TAS2R45P59539 299 aa5.4□□□□□ -1.54
USP48-207ENST00000471752 SLAQ13239 276 aa5.4□□□□□ -1.54
USP48-207ENST00000471752 RPL7L1Q6DKI1 246 aaKnown RBP5.4□□□□□ -1.54
USP48-207ENST00000471752 PRNTQ86SH4 94 aa5.4□□□□□ -1.54
USP48-207ENST00000471752 NHLRC2Q8NBF2 726 aa5.4□□□□□ -1.54
USP48-207ENST00000471752 CMTM2Q8TAZ6 248 aa5.4□□□□□ -1.54
USP48-207ENST00000471752 ASB13Q8WXK3 278 aa5.4□□□□□ -1.54
USP48-207ENST00000471752 SAMD10Q9BYL1 202 aa5.4□□□□□ -1.54
USP48-207ENST00000471752 KCNIP2Q9NS61 270 aa5.4□□□□□ -1.54
USP48-207ENST00000471752 LENEPQ9Y5L5 61 aa5.4□□□□□ -1.54
USP48-207ENST00000471752 PKHD1L1Q86WI1 4243 aa5.4□□□□□ -1.55
USP48-207ENST00000471752 RNF222A6NCQ9 220 aa5.39□□□□□ -1.55
USP48-207ENST00000471752 SMLR1H3BR10 107 aa5.39□□□□□ -1.55
USP48-207ENST00000471752 CDC34P49427 236 aaPredicted RBP5.39□□□□□ -1.55
USP48-207ENST00000471752 FGF8P55075 233 aaPredicted RBP5.39□□□□□ -1.55
USP48-207ENST00000471752 UBE2G2P60604 165 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms