RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 UFC1Q9Y3C8 167 aa14.09□□□□□ -0.15
COL20A1-205ENST00000471582 PDZD2O15018 2839 aa14.09□□□□□ -0.15
COL20A1-205ENST00000471582 LINC01546A6NGU7 62 aa14.09□□□□□ -0.15
COL20A1-205ENST00000471582 HNRNPA3P51991 378 aaKnown RBP14.09□□□□□ -0.15
COL20A1-205ENST00000471582 RPL11P62913 178 aaKnown RBP14.09□□□□□ -0.15
COL20A1-205ENST00000471582 TRAV21A0A0B4J279 112 aa14.08□□□□□ -0.16
COL20A1-205ENST00000471582 SMKR1H3BMG3 65 aa14.08□□□□□ -0.16
COL20A1-205ENST00000471582 Q6YL49 198 aa14.08□□□□□ -0.16
COL20A1-205ENST00000471582 APRG1Q8IVJ8 170 aa14.08□□□□□ -0.16
COL20A1-205ENST00000471582 WFDC11Q8NEX6 87 aa14.08□□□□□ -0.16
COL20A1-205ENST00000471582 OR8A1Q8NGG7 326 aa14.08□□□□□ -0.16
COL20A1-205ENST00000471582 MAP1LC3AQ9H492 121 aa14.08□□□□□ -0.16
COL20A1-205ENST00000471582 NCR2O95944 276 aa14.07□□□□□ -0.16
COL20A1-205ENST00000471582 SMIM15Q7Z3B0 74 aa14.07□□□□□ -0.16
COL20A1-205ENST00000471582 FOXC2Q99958 501 aa14.07□□□□□ -0.16
COL20A1-205ENST00000471582 MRPS16Q9Y3D3 137 aaKnown RBP14.07□□□□□ -0.16
COL20A1-205ENST00000471582 HBDP02042 147 aa14.07□□□□□ -0.16
COL20A1-205ENST00000471582 TSPOP30536 169 aa14.06□□□□□ -0.16
COL20A1-205ENST00000471582 TEX29Q8N6K0 151 aa14.06□□□□□ -0.16
COL20A1-205ENST00000471582 ZNF469Q96JG9 3925 aaPredicted RBP14.06□□□□□ -0.16
COL20A1-205ENST00000471582 HSBP1L1C9JCN9 74 aa14.05□□□□□ -0.16
COL20A1-205ENST00000471582 NXT2Q9NPJ8 142 aaKnown RBP14.05□□□□□ -0.16
COL20A1-205ENST00000471582 ZANQ9Y493 2812 aa14.05□□□□□ -0.16
COL20A1-205ENST00000471582 TNFRSF6BO95407 300 aa14.05□□□□□ -0.16
COL20A1-205ENST00000471582 RPLP1P05386 114 aaKnown RBP14.05□□□□□ -0.16
COL20A1-205ENST00000471582 ID1P41134 155 aa14.05□□□□□ -0.16
COL20A1-205ENST00000471582 MYOZ3Q8TDC0 251 aa14.05□□□□□ -0.16
COL20A1-205ENST00000471582 TIMM8BQ9Y5J9 83 aaPredicted RBP14.05□□□□□ -0.16
COL20A1-205ENST00000471582 CCDC168Q8NDH2 2452 aa14.04□□□□□ -0.16
COL20A1-205ENST00000471582 ELANEP08246 267 aa14.04□□□□□ -0.16
COL20A1-205ENST00000471582 Q6ZQT7 251 aa14.04□□□□□ -0.16
COL20A1-205ENST00000471582 DEFB125Q8N687 156 aa14.04□□□□□ -0.16
COL20A1-205ENST00000471582 MS4A6AQ9H2W1 248 aa14.04□□□□□ -0.16
COL20A1-205ENST00000471582 ITPR3Q14573 2671 aa14.04□□□□□ -0.16
COL20A1-205ENST00000471582 MED14OSP0DP75 135 aa14.03□□□□□ -0.16
COL20A1-205ENST00000471582 SPANXN1Q5VSR9 72 aa14.03□□□□□ -0.16
COL20A1-205ENST00000471582 DCANP1Q8TF63 244 aa14.03□□□□□ -0.16
COL20A1-205ENST00000471582 H3BVH4 76 aa14.03□□□□□ -0.16
COL20A1-205ENST00000471582 EVI2AP22794 236 aa14.03□□□□□ -0.16
COL20A1-205ENST00000471582 ZNF702PQ9H963 129 aa14.03□□□□□ -0.16
COL20A1-205ENST00000471582 hDV102S1A0JD36 115 aa14.02□□□□□ -0.16
COL20A1-205ENST00000471582 PRSS47A8MTI9 375 aa14.02□□□□□ -0.16
COL20A1-205ENST00000471582 C10orf99Q6UWK7 81 aa14.02□□□□□ -0.16
COL20A1-205ENST00000471582 H0Y8G0 127 aa14.02□□□□□ -0.17
COL20A1-205ENST00000471582 LGALS1P09382 135 aaKnown RBP14.02□□□□□ -0.17
COL20A1-205ENST00000471582 LGALS9BQ3B8N2 356 aa14.02□□□□□ -0.17
COL20A1-205ENST00000471582 COL5A1-AS1Q5SY13 56 aa14.02□□□□□ -0.17
COL20A1-205ENST00000471582 LGALS9CQ6DKI2 356 aa14.02□□□□□ -0.17
COL20A1-205ENST00000471582 RNF152Q8N8N0 203 aa14.02□□□□□ -0.17
COL20A1-205ENST00000471582 AKAP9Q99996 3911 aa14.01□□□□□ -0.17
COL20A1-205ENST00000471582 IGKV3-7A0A075B6H7 116 aa14.01□□□□□ -0.17
COL20A1-205ENST00000471582 F6UB75 175 aa14.01□□□□□ -0.17
COL20A1-205ENST00000471582 LGALS9O00182 355 aa14.01□□□□□ -0.17
COL20A1-205ENST00000471582 GAS8-AS1O95177 125 aa14.01□□□□□ -0.17
COL20A1-205ENST00000471582 FOSL1P15407 271 aa14.01□□□□□ -0.17
COL20A1-205ENST00000471582 ASIPP42127 132 aa14.01□□□□□ -0.17
COL20A1-205ENST00000471582 DEFB1P60022 68 aa14.01□□□□□ -0.17
COL20A1-205ENST00000471582 HOXA3O43365 443 aaPredicted RBP14□□□□□ -0.17
COL20A1-205ENST00000471582 EDN2P20800 178 aa14□□□□□ -0.17
COL20A1-205ENST00000471582 Q8N8P6 123 aa14□□□□□ -0.17
COL20A1-205ENST00000471582 OR2K2Q8NGT1 345 aa14□□□□□ -0.17
COL20A1-205ENST00000471582 UBE2E2Q96LR5 201 aa14□□□□□ -0.17
COL20A1-205ENST00000471582 KLLNB2CW77 178 aa14□□□□□ -0.17
COL20A1-205ENST00000471582 J3KRW8 73 aa14□□□□□ -0.17
COL20A1-205ENST00000471582 BATFQ16520 125 aa14□□□□□ -0.17
COL20A1-205ENST00000471582 DPF1Q92782 380 aa14□□□□□ -0.17
COL20A1-205ENST00000471582 IFI27L1Q96BM0 104 aa14□□□□□ -0.17
COL20A1-205ENST00000471582 MRAP2Q96G30 205 aa14□□□□□ -0.17
COL20A1-205ENST00000471582 MCRIP2Q9BUT9 160 aaKnown RBP14□□□□□ -0.17
COL20A1-205ENST00000471582 SCRT2Q9NQ03 307 aa14□□□□□ -0.17
COL20A1-205ENST00000471582 TCAPO15273 167 aa13.99□□□□□ -0.17
COL20A1-205ENST00000471582 FCER1GP30273 86 aa13.99□□□□□ -0.17
COL20A1-205ENST00000471582 RNASE4P34096 147 aaKnown RBP13.99□□□□□ -0.17
COL20A1-205ENST00000471582 ANXA2RQ3ZCQ2 193 aa13.99□□□□□ -0.17
COL20A1-205ENST00000471582 NRACQ8N912 160 aa13.99□□□□□ -0.17
COL20A1-205ENST00000471582 IGLV2-18A0A075B6J9 118 aa13.98□□□□□ -0.17
COL20A1-205ENST00000471582 S100A4P26447 101 aaKnown RBP13.98□□□□□ -0.17
COL20A1-205ENST00000471582 SLC25A34Q6PIV7 304 aa13.98□□□□□ -0.17
COL20A1-205ENST00000471582 ODF3Q96PU9 254 aa13.98□□□□□ -0.17
COL20A1-205ENST00000471582 GOLT1BQ9Y3E0 138 aa13.98□□□□□ -0.17
COL20A1-205ENST00000471582 GATA1P15976 413 aaPredicted RBP13.98□□□□□ -0.17
COL20A1-205ENST00000471582 SRD5A1P18405 259 aa13.98□□□□□ -0.17
COL20A1-205ENST00000471582 Q8N2B8 174 aa13.98□□□□□ -0.17
COL20A1-205ENST00000471582 PMCHL2Q9BQD1 86 aa13.98□□□□□ -0.17
COL20A1-205ENST00000471582 MXRA5Q9NR99 2828 aa13.97□□□□□ -0.17
COL20A1-205ENST00000471582 TEX15Q9BXT5 2789 aa13.97□□□□□ -0.17
COL20A1-205ENST00000471582 NOTCH2Q04721 2471 aa13.97□□□□□ -0.17
COL20A1-205ENST00000471582 LEPP41159 167 aa13.96□□□□□ -0.17
COL20A1-205ENST00000471582 PHLDA3Q9Y5J5 127 aa13.96□□□□□ -0.17
COL20A1-205ENST00000471582 FLNAP21333 2647 aaKnown RBP13.96□□□□□ -0.17
COL20A1-205ENST00000471582 FXYD7P58549 80 aa13.96□□□□□ -0.18
COL20A1-205ENST00000471582 SNRPD3P62318 126 aaKnown RBP13.96□□□□□ -0.18
COL20A1-205ENST00000471582 NXPH4O95158 308 aa13.95□□□□□ -0.18
COL20A1-205ENST00000471582 FLNBO75369 2602 aaKnown RBP13.94□□□□□ -0.18
COL20A1-205ENST00000471582 IGHV4OR15-8A0A075B7B6 117 aa13.94□□□□□ -0.18
COL20A1-205ENST00000471582 A0A087WW49 117 aa13.94□□□□□ -0.18
COL20A1-205ENST00000471582 K7EQG2 157 aa13.94□□□□□ -0.18
COL20A1-205ENST00000471582 RNASE3P12724 160 aaKnown RBP13.94□□□□□ -0.18
COL20A1-205ENST00000471582 SYNJ2BPP57105 145 aa13.94□□□□□ -0.18
COL20A1-205ENST00000471582 DPH3P1Q9H4G8 78 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms