RNA–Protein interactions for RNA: ENST00000471526.1

SHQ1-206, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 4

Gene SHQ1, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-206ENST00000471526 TRAV21A0A0B4J279 112 aa13.01□□□□□ -0.33
SHQ1-206ENST00000471526 A0A1W2PPV4 95 aa13.01□□□□□ -0.33
SHQ1-206ENST00000471526 F6UZH7 168 aa13.01□□□□□ -0.33
SHQ1-206ENST00000471526 CRYGDP07320 174 aa13.01□□□□□ -0.33
SHQ1-206ENST00000471526 PET100P0DJ07 73 aa13.01□□□□□ -0.33
SHQ1-206ENST00000471526 TREM1Q9NP99 234 aa13.01□□□□□ -0.33
SHQ1-206ENST00000471526 TRAV8-1A0A0A6YYK1 113 aa13□□□□□ -0.33
SHQ1-206ENST00000471526 INAFM2P0DMQ5 153 aa13□□□□□ -0.33
SHQ1-206ENST00000471526 ACOT6Q3I5F7 207 aaPredicted RBP13□□□□□ -0.33
SHQ1-206ENST00000471526 NHLRC2Q8NBF2 726 aa13□□□□□ -0.33
SHQ1-206ENST00000471526 TVP23CQ96ET8 276 aa13□□□□□ -0.33
SHQ1-206ENST00000471526 WFDC1Q9HC57 220 aa13□□□□□ -0.33
SHQ1-206ENST00000471526 SDF2L1Q9HCN8 221 aa13□□□□□ -0.33
SHQ1-206ENST00000471526 HMGB3O15347 200 aaKnown RBP12.99□□□□□ -0.33
SHQ1-206ENST00000471526 TYMSP04818 313 aa12.99□□□□□ -0.33
SHQ1-206ENST00000471526 GNG5P63218 68 aa12.99□□□□□ -0.33
SHQ1-206ENST00000471526 PQLC2Q6ZP29 291 aa12.99□□□□□ -0.33
SHQ1-206ENST00000471526 SGK494Q96LW2 274 aa12.99□□□□□ -0.33
SHQ1-206ENST00000471526 MARVELD1Q9BSK0 173 aa12.99□□□□□ -0.33
SHQ1-206ENST00000471526 PPT1P50897 306 aa12.98□□□□□ -0.33
SHQ1-206ENST00000471526 RAB2AP61019 212 aa12.98□□□□□ -0.33
SHQ1-206ENST00000471526 SH2D6Q7Z4S9 175 aa12.98□□□□□ -0.33
SHQ1-206ENST00000471526 C10orf126Q8N4M7 172 aa12.98□□□□□ -0.33
SHQ1-206ENST00000471526 FRZBQ92765 325 aa12.98□□□□□ -0.33
SHQ1-206ENST00000471526 IGHV3-38A0A0C4DH36 116 aa12.97□□□□□ -0.33
SHQ1-206ENST00000471526 PSCAO43653 123 aa12.97□□□□□ -0.33
SHQ1-206ENST00000471526 GATA1P15976 413 aaPredicted RBP12.97□□□□□ -0.33
SHQ1-206ENST00000471526 GCSHP23434 173 aa12.97□□□□□ -0.33
SHQ1-206ENST00000471526 Q5VSD8 79 aa12.97□□□□□ -0.33
SHQ1-206ENST00000471526 ASB13Q8WXK3 278 aa12.97□□□□□ -0.33
SHQ1-206ENST00000471526 KCNS1Q96KK3 526 aa12.97□□□□□ -0.33
SHQ1-206ENST00000471526 SMR3BP02814 79 aaPredicted RBP12.96□□□□□ -0.33
SHQ1-206ENST00000471526 ARL6IP6Q8N6S5 226 aa12.96□□□□□ -0.33
SHQ1-206ENST00000471526 OR10G9Q8NGN4 311 aa12.96□□□□□ -0.33
SHQ1-206ENST00000471526 OR10G7Q8NGN6 311 aa12.96□□□□□ -0.33
SHQ1-206ENST00000471526 FBLL1A6NHQ2 334 aaKnown RBP12.95□□□□□ -0.34
SHQ1-206ENST00000471526 IGHV3-73A0A0B4J1V6 119 aa12.94□□□□□ -0.34
SHQ1-206ENST00000471526 TIRAPP58753 221 aa12.94□□□□□ -0.34
SHQ1-206ENST00000471526 ZNF876PQ49A33 203 aa12.94□□□□□ -0.34
SHQ1-206ENST00000471526 SLC25A29Q8N8R3 303 aa12.94□□□□□ -0.34
SHQ1-206ENST00000471526 NDFIP1Q9BT67 221 aa12.94□□□□□ -0.34
SHQ1-206ENST00000471526 TRAV8-6A0A0B4J262 113 aa12.93□□□□□ -0.34
SHQ1-206ENST00000471526 PFN1P07737 140 aaKnown RBP12.93□□□□□ -0.34
SHQ1-206ENST00000471526 ARL14EPLP0DKL9 152 aa12.93□□□□□ -0.34
SHQ1-206ENST00000471526 HAMPP81172 84 aa12.93□□□□□ -0.34
SHQ1-206ENST00000471526 OR10J3Q5JRS4 329 aa12.93□□□□□ -0.34
SHQ1-206ENST00000471526 PRADC1Q9BSG0 188 aa12.93□□□□□ -0.34
SHQ1-206ENST00000471526 IGLV5-52A0A0A0MRZ9 124 aa12.92□□□□□ -0.34
SHQ1-206ENST00000471526 ZNF80P51504 273 aaPredicted RBP12.92□□□□□ -0.34
SHQ1-206ENST00000471526 DEFA1P59665 94 aa12.92□□□□□ -0.34
SHQ1-206ENST00000471526 DEFA3P59666 94 aa12.92□□□□□ -0.34
SHQ1-206ENST00000471526 LINC01556Q5JQF7 62 aa12.92□□□□□ -0.34
SHQ1-206ENST00000471526 CFAP126Q5VTH2 177 aa12.92□□□□□ -0.34
SHQ1-206ENST00000471526 DPPA3Q6W0C5 159 aa12.92□□□□□ -0.34
SHQ1-206ENST00000471526 Q9HAA7 133 aa12.92□□□□□ -0.34
SHQ1-206ENST00000471526 C11orf21Q9P2W6 132 aa12.92□□□□□ -0.34
SHQ1-206ENST00000471526 LRCOL1A6NCL2 159 aa12.91□□□□□ -0.34
SHQ1-206ENST00000471526 IBA57-AS1B1ANH7 110 aa12.91□□□□□ -0.34
SHQ1-206ENST00000471526 RS1O15537 224 aa12.91□□□□□ -0.34
SHQ1-206ENST00000471526 IGHV3-30P01768 117 aa12.91□□□□□ -0.34
SHQ1-206ENST00000471526 IGHV3-33P01772 117 aa12.91□□□□□ -0.34
SHQ1-206ENST00000471526 IGHV3-30-3P0DP02 117 aa12.91□□□□□ -0.34
SHQ1-206ENST00000471526 IGHV3-30-5P0DP03 117 aa12.91□□□□□ -0.34
SHQ1-206ENST00000471526 CDC34P49427 236 aaPredicted RBP12.91□□□□□ -0.34
SHQ1-206ENST00000471526 RHOHQ15669 191 aa12.91□□□□□ -0.34
SHQ1-206ENST00000471526 SERTM2A0A1B0GWG4 89 aa12.9□□□□□ -0.34
SHQ1-206ENST00000471526 TRBV6-4A0A1B0GX49 114 aa12.9□□□□□ -0.34
SHQ1-206ENST00000471526 TAAR5O14804 337 aa12.9□□□□□ -0.34
SHQ1-206ENST00000471526 GCGP01275 180 aa12.9□□□□□ -0.34
SHQ1-206ENST00000471526 TCRAP04437 139 aa12.9□□□□□ -0.34
SHQ1-206ENST00000471526 TMEM75Q8N9X5 138 aa12.9□□□□□ -0.34
SHQ1-206ENST00000471526 C5orf17Q8NAS9 161 aa12.9□□□□□ -0.34
SHQ1-206ENST00000471526 HSD17B11Q8NBQ5 300 aa12.9□□□□□ -0.34
SHQ1-206ENST00000471526 PSG8Q9UQ74 426 aa12.9□□□□□ -0.34
SHQ1-206ENST00000471526 PGPEP1LA6NFU8 196 aa12.89□□□□□ -0.35
SHQ1-206ENST00000471526 K7EQM0 130 aa12.89□□□□□ -0.35
SHQ1-206ENST00000471526 CIDEAO60543 219 aa12.89□□□□□ -0.35
SHQ1-206ENST00000471526 STAG3L2P0CL84 134 aa12.89□□□□□ -0.35
SHQ1-206ENST00000471526 STAG3L3P0CL85 134 aa12.89□□□□□ -0.35
SHQ1-206ENST00000471526 RAB24Q969Q5 203 aa12.89□□□□□ -0.35
SHQ1-206ENST00000471526 FAM229AH3BQW9 127 aa12.88□□□□□ -0.35
SHQ1-206ENST00000471526 GCHFRP30047 84 aa12.88□□□□□ -0.35
SHQ1-206ENST00000471526 SUMO1P63165 101 aaKnown RBP12.88□□□□□ -0.35
SHQ1-206ENST00000471526 LELP1Q5T871 98 aa12.88□□□□□ -0.35
SHQ1-206ENST00000471526 PRNTQ86SH4 94 aa12.88□□□□□ -0.35
SHQ1-206ENST00000471526 NTN5Q8WTR8 489 aaPredicted RBP12.88□□□□□ -0.35
SHQ1-206ENST00000471526 C9orf85Q96MD7 179 aa12.88□□□□□ -0.35
SHQ1-206ENST00000471526 A6NHS1 94 aa12.87□□□□□ -0.35
SHQ1-206ENST00000471526 FLI1Q01543 452 aaPredicted RBP12.87□□□□□ -0.35
SHQ1-206ENST00000471526 SMUG1Q53HV7 270 aa12.87□□□□□ -0.35
SHQ1-206ENST00000471526 ZNF506Q5JVG8 444 aa12.87□□□□□ -0.35
SHQ1-206ENST00000471526 Q8N814 137 aa12.87□□□□□ -0.35
SHQ1-206ENST00000471526 ATP6V0E2Q8NHE4 81 aa12.87□□□□□ -0.35
SHQ1-206ENST00000471526 EPDR1Q9UM22 224 aa12.87□□□□□ -0.35
SHQ1-206ENST00000471526 BOLA1Q9Y3E2 137 aa12.87□□□□□ -0.35
SHQ1-206ENST00000471526 FAT1Q14517 4588 aa12.86□□□□□ -0.35
SHQ1-206ENST00000471526 IGLV2-11P01706 119 aa12.86□□□□□ -0.35
SHQ1-206ENST00000471526 ZFP69Q49AA0 526 aa12.86□□□□□ -0.35
SHQ1-206ENST00000471526 OR2G3Q8NGZ4 309 aa12.86□□□□□ -0.35
SHQ1-206ENST00000471526 SUN5Q8TC36 379 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms