RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 LY6G6CO95867 125 aa0.29□□□□□ -2.36
COPS3-206ENST00000471414 PSPHP78330 225 aa0.29□□□□□ -2.36
COPS3-206ENST00000471414 RHOHQ15669 191 aa0.29□□□□□ -2.36
COPS3-206ENST00000471414 Q5XG85 94 aa0.29□□□□□ -2.36
COPS3-206ENST00000471414 LYPD5Q6UWN5 251 aa0.29□□□□□ -2.36
COPS3-206ENST00000471414 IDO2Q6ZQW0 420 aa0.29□□□□□ -2.36
COPS3-206ENST00000471414 OR8I2Q8N0Y5 310 aa0.29□□□□□ -2.36
COPS3-206ENST00000471414 C5orf56Q8N8D9 126 aa0.29□□□□□ -2.36
COPS3-206ENST00000471414 DMAC1Q96GE9 116 aa0.29□□□□□ -2.36
COPS3-206ENST00000471414 SMR3AQ99954 134 aa0.29□□□□□ -2.36
COPS3-206ENST00000471414 DLEC1Q9Y238 1755 aa0.29□□□□□ -2.36
COPS3-206ENST00000471414 PTPRGP23470 1445 aa0.29□□□□□ -2.36
COPS3-206ENST00000471414 CDK12Q9NYV4 1490 aaPredicted RBP0.29□□□□□ -2.36
COPS3-206ENST00000471414 HELZP42694 1942 aaKnown RBP0.28□□□□□ -2.36
COPS3-206ENST00000471414 LRP5O75197 1615 aa0.28□□□□□ -2.36
COPS3-206ENST00000471414 RREB1Q92766 1687 aa0.28□□□□□ -2.36
COPS3-206ENST00000471414 TRAV36DV7A0A075B6V5 113 aa0.28□□□□□ -2.36
COPS3-206ENST00000471414 LOC101927531A0A1B0GV80 90 aa0.28□□□□□ -2.36
COPS3-206ENST00000471414 A0A1B0GX51 115 aa0.28□□□□□ -2.36
COPS3-206ENST00000471414 PHGR1C9JFL3 82 aa0.28□□□□□ -2.36
COPS3-206ENST00000471414 IGKCP01834 107 aa0.28□□□□□ -2.36
COPS3-206ENST00000471414 TCRAP04437 139 aa0.28□□□□□ -2.36
COPS3-206ENST00000471414 NBEAP1P0C6P0 100 aa0.28□□□□□ -2.36
COPS3-206ENST00000471414 IL7P13232 177 aa0.28□□□□□ -2.36
COPS3-206ENST00000471414 HIST1H1BP16401 226 aaKnown RBP0.28□□□□□ -2.36
COPS3-206ENST00000471414 ADCYAP1P18509 176 aa0.28□□□□□ -2.36
COPS3-206ENST00000471414 PCBD1P61457 104 aa0.28□□□□□ -2.36
COPS3-206ENST00000471414 ZNF56Q15929 161 aa0.28□□□□□ -2.36
COPS3-206ENST00000471414 HSD17B12Q53GQ0 312 aa0.28□□□□□ -2.36
COPS3-206ENST00000471414 OR4S1Q8NGB4 309 aa0.28□□□□□ -2.36
COPS3-206ENST00000471414 METTL1Q9UBP6 276 aaKnown RBP0.28□□□□□ -2.36
COPS3-206ENST00000471414 ASH1LQ9NR48 2969 aaKnown RBP0.28□□□□□ -2.36
COPS3-206ENST00000471414 ARAP1Q96P48 1450 aa0.28□□□□□ -2.37
COPS3-206ENST00000471414 PAEPP09466 180 aa0.27□□□□□ -2.37
COPS3-206ENST00000471414 SDC4P31431 198 aa0.27□□□□□ -2.37
COPS3-206ENST00000471414 RPL37P61927 97 aaKnown RBP0.27□□□□□ -2.37
COPS3-206ENST00000471414 OR8B8Q15620 311 aa0.27□□□□□ -2.37
COPS3-206ENST00000471414 TAC4Q86UU9 113 aa0.27□□□□□ -2.37
COPS3-206ENST00000471414 ATG5Q9H1Y0 275 aa0.27□□□□□ -2.37
COPS3-206ENST00000471414 MRPL40Q9NQ50 206 aaKnown RBP0.27□□□□□ -2.37
COPS3-206ENST00000471414 ARHGAP31Q2M1Z3 1444 aa0.27□□□□□ -2.37
COPS3-206ENST00000471414 ZCCHC6Q5VYS8 1495 aaKnown RBP0.27□□□□□ -2.37
COPS3-206ENST00000471414 RBBP6Q7Z6E9 1792 aaKnown RBP0.27□□□□□ -2.37
COPS3-206ENST00000471414 PLXNA2O75051 1894 aa0.27□□□□□ -2.37
COPS3-206ENST00000471414 MACF1Q9UPN3 7388 aaKnown RBP0.26□□□□□ -2.37
COPS3-206ENST00000471414 FXYD1O00168 92 aa0.26□□□□□ -2.37
COPS3-206ENST00000471414 DEGS1O15121 323 aa0.26□□□□□ -2.37
COPS3-206ENST00000471414 SCTP09683 121 aa0.26□□□□□ -2.37
COPS3-206ENST00000471414 KRTAP2-3P0C7H8 128 aa0.26□□□□□ -2.37
COPS3-206ENST00000471414 PLGLB1Q02325 96 aa0.26□□□□□ -2.37
COPS3-206ENST00000471414 IQCJQ1A5X6 159 aa0.26□□□□□ -2.37
COPS3-206ENST00000471414 UNQ5815/PRO19632Q6UWF5 114 aa0.26□□□□□ -2.37
COPS3-206ENST00000471414 TMEM91Q6ZNR0 172 aa0.26□□□□□ -2.37
COPS3-206ENST00000471414 KRTAP2-4Q9BYR9 128 aa0.26□□□□□ -2.37
COPS3-206ENST00000471414 KRTAP2-1Q9BYU5 128 aa0.26□□□□□ -2.37
COPS3-206ENST00000471414 SLC35B3Q9H1N7 401 aa0.26□□□□□ -2.37
COPS3-206ENST00000471414 SPANXA1Q9NS26 97 aa0.26□□□□□ -2.37
COPS3-206ENST00000471414 CALML5Q9NZT1 146 aa0.26□□□□□ -2.37
COPS3-206ENST00000471414 MAP2P11137 1827 aaKnown RBP0.26□□□□□ -2.37
COPS3-206ENST00000471414 FSIP2Q5CZC0 6907 aa0.26□□□□□ -2.37
COPS3-206ENST00000471414 KNTC1P50748 2209 aa0.25□□□□□ -2.37
COPS3-206ENST00000471414 MDN1Q9NU22 5596 aa0.25□□□□□ -2.37
COPS3-206ENST00000471414 BLMP54132 1417 aaPredicted RBP0.25□□□□□ -2.37
COPS3-206ENST00000471414 CPDO75976 1380 aa0.25□□□□□ -2.37
COPS3-206ENST00000471414 TRBV10-1A0A0K0K1A3 114 aa0.25□□□□□ -2.37
COPS3-206ENST00000471414 TNFSF15O95150 251 aa0.25□□□□□ -2.37
COPS3-206ENST00000471414 MT-ND4LP03901 98 aa0.25□□□□□ -2.37
COPS3-206ENST00000471414 CD3DP04234 171 aa0.25□□□□□ -2.37
COPS3-206ENST00000471414 CCKP06307 115 aa0.25□□□□□ -2.37
COPS3-206ENST00000471414 POLR2JP52435 117 aaKnown RBP0.25□□□□□ -2.37
COPS3-206ENST00000471414 KLKP1Q107X0 134 aa0.25□□□□□ -2.37
COPS3-206ENST00000471414 TMEM244Q5VVB8 128 aa0.25□□□□□ -2.37
COPS3-206ENST00000471414 TSKUQ8WUA8 353 aa0.25□□□□□ -2.37
COPS3-206ENST00000471414 BANF2Q9H503 90 aa0.25□□□□□ -2.37
COPS3-206ENST00000471414 SPANXCQ9NY87 97 aa0.25□□□□□ -2.37
COPS3-206ENST00000471414 TNCP24821 2201 aa0.24□□□□□ -2.37
COPS3-206ENST00000471414 A0A1B0GW64 132 aa0.24□□□□□ -2.37
COPS3-206ENST00000471414 C9JAW5 83 aa0.24□□□□□ -2.37
COPS3-206ENST00000471414 SMIM24O75264 130 aa0.24□□□□□ -2.37
COPS3-206ENST00000471414 HLA-DRB4P13762 266 aa0.24□□□□□ -2.37
COPS3-206ENST00000471414 CMPK1P30085 196 aa0.24□□□□□ -2.37
COPS3-206ENST00000471414 ESPL1Q14674 2120 aa0.24□□□□□ -2.37
COPS3-206ENST00000471414 CCDC153Q494R4 210 aa0.24□□□□□ -2.37
COPS3-206ENST00000471414 TCTE3Q8IZS6 198 aa0.24□□□□□ -2.37
COPS3-206ENST00000471414 PPDPFLQ8WWR9 84 aa0.24□□□□□ -2.37
COPS3-206ENST00000471414 MAGOHBQ96A72 148 aaKnown RBP0.24□□□□□ -2.37
COPS3-206ENST00000471414 TMEM14BQ9NUH8 114 aa0.24□□□□□ -2.37
COPS3-206ENST00000471414 HIGD1AQ9Y241 93 aa0.24□□□□□ -2.37
COPS3-206ENST00000471414 DNAJC15Q9Y5T4 150 aa0.24□□□□□ -2.37
COPS3-206ENST00000471414 HLA-DRB4X5D2U9 266 aa0.24□□□□□ -2.37
COPS3-206ENST00000471414 UNC13AQ9UPW8 1703 aa0.24□□□□□ -2.37
COPS3-206ENST00000471414 TANC1Q9C0D5 1861 aa0.23□□□□□ -2.37
COPS3-206ENST00000471414 KMT2DO14686 5537 aa0.23□□□□□ -2.37
COPS3-206ENST00000471414 BORCS7-ASMTA0A0B4J1R7 106 aa0.23□□□□□ -2.37
COPS3-206ENST00000471414 TRAV2A0A0B4J234 112 aa0.23□□□□□ -2.37
COPS3-206ENST00000471414 TRAV17A0A0B4J275 112 aa0.23□□□□□ -2.37
COPS3-206ENST00000471414 OR2H2O95918 312 aa0.23□□□□□ -2.37
COPS3-206ENST00000471414 AKR1D1P51857 326 aa0.23□□□□□ -2.37
COPS3-206ENST00000471414 DR1Q01658 176 aa0.23□□□□□ -2.37
COPS3-206ENST00000471414 SLC25A26Q70HW3 274 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms