RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 ZNF705GA8MUZ8 300 aaPredicted RBP7.08□□□□□ -1.28
SF3A1-207ENST00000471342 K7EQM0 130 aa7.08□□□□□ -1.28
SF3A1-207ENST00000471342 UBE2CO00762 179 aa7.08□□□□□ -1.28
SF3A1-207ENST00000471342 AMBPP02760 352 aa7.08□□□□□ -1.28
SF3A1-207ENST00000471342 TYMSP04818 313 aa7.08□□□□□ -1.28
SF3A1-207ENST00000471342 GPX1P07203 203 aa7.08□□□□□ -1.28
SF3A1-207ENST00000471342 FOXA3P55318 350 aaPredicted RBP7.08□□□□□ -1.28
SF3A1-207ENST00000471342 DEFB135Q30KP9 77 aa7.08□□□□□ -1.28
SF3A1-207ENST00000471342 C9orf85Q96MD7 179 aa7.08□□□□□ -1.28
SF3A1-207ENST00000471342 B9D2Q9BPU9 175 aa7.08□□□□□ -1.28
SF3A1-207ENST00000471342 OSTCQ9NRP0 149 aa7.08□□□□□ -1.28
SF3A1-207ENST00000471342 TP53TG1Q9Y2A0 90 aa7.08□□□□□ -1.28
SF3A1-207ENST00000471342 TRAV21A0A0B4J279 112 aa7.07□□□□□ -1.28
SF3A1-207ENST00000471342 F8W036 122 aa7.07□□□□□ -1.28
SF3A1-207ENST00000471342 GZMBP10144 247 aa7.07□□□□□ -1.28
SF3A1-207ENST00000471342 TSPOP30536 169 aa7.07□□□□□ -1.28
SF3A1-207ENST00000471342 MUC21Q5SSG8 566 aa7.07□□□□□ -1.28
SF3A1-207ENST00000471342 FAM162BQ5T6X4 162 aa7.07□□□□□ -1.28
SF3A1-207ENST00000471342 LINC00612Q8N6U2 182 aa7.07□□□□□ -1.28
SF3A1-207ENST00000471342 CLRN3Q8NCR9 226 aa7.07□□□□□ -1.28
SF3A1-207ENST00000471342 TUBA4BQ9H853 241 aa7.07□□□□□ -1.28
SF3A1-207ENST00000471342 IGHV1OR15-1A0A075B7D0 117 aa7.06□□□□□ -1.28
SF3A1-207ENST00000471342 H7BYZ3 331 aa7.06□□□□□ -1.28
SF3A1-207ENST00000471342 SNAI2O43623 268 aa7.06□□□□□ -1.28
SF3A1-207ENST00000471342 INSP01308 110 aa7.06□□□□□ -1.28
SF3A1-207ENST00000471342 CXCL1P09341 107 aa7.06□□□□□ -1.28
SF3A1-207ENST00000471342 RNF212Q495C1 297 aa7.06□□□□□ -1.28
SF3A1-207ENST00000471342 POM121L12Q8N7R1 296 aa7.06□□□□□ -1.28
SF3A1-207ENST00000471342 MRAPQ8TCY5 172 aa7.06□□□□□ -1.28
SF3A1-207ENST00000471342 SFRP2Q96HF1 295 aa7.06□□□□□ -1.28
SF3A1-207ENST00000471342 PYGO2Q9BRQ0 406 aa7.06□□□□□ -1.28
SF3A1-207ENST00000471342 CSMD3Q7Z407 3707 aa7.05□□□□□ -1.28
SF3A1-207ENST00000471342 SMIM27A0A1W2PRY6 76 aa7.05□□□□□ -1.28
SF3A1-207ENST00000471342 C7orf77A4D0Y5 90 aa7.05□□□□□ -1.28
SF3A1-207ENST00000471342 GRIFINA4D1Z8 144 aa7.05□□□□□ -1.28
SF3A1-207ENST00000471342 M0R036 132 aa7.05□□□□□ -1.28
SF3A1-207ENST00000471342 NXPH4O95158 308 aa7.05□□□□□ -1.28
SF3A1-207ENST00000471342 MGST1P10620 155 aaKnown RBP7.05□□□□□ -1.28
SF3A1-207ENST00000471342 APOC4P55056 127 aa7.05□□□□□ -1.28
SF3A1-207ENST00000471342 NUTF2P61970 127 aaKnown RBP7.05□□□□□ -1.28
SF3A1-207ENST00000471342 CT83Q5H943 113 aa7.05□□□□□ -1.28
SF3A1-207ENST00000471342 PRR27Q6MZM9 219 aa7.05□□□□□ -1.28
SF3A1-207ENST00000471342 NIPSNAP3BQ9BS92 247 aa7.05□□□□□ -1.28
SF3A1-207ENST00000471342 CNFNQ9BYD5 112 aa7.05□□□□□ -1.28
SF3A1-207ENST00000471342 CELA1Q9UNI1 258 aa7.05□□□□□ -1.28
SF3A1-207ENST00000471342 MUC4Q99102 2169 aa7.05□□□□□ -1.28
SF3A1-207ENST00000471342 STAB2Q8WWQ8 2551 aa7.05□□□□□ -1.28
SF3A1-207ENST00000471342 IGHV4-4A0A075B6R2 117 aa7.04□□□□□ -1.28
SF3A1-207ENST00000471342 IGHV4-28A0A0C4DH34 117 aa7.04□□□□□ -1.28
SF3A1-207ENST00000471342 ATP6V1G1O75348 118 aa7.04□□□□□ -1.28
SF3A1-207ENST00000471342 LINC00315P59091 139 aa7.04□□□□□ -1.28
SF3A1-207ENST00000471342 PNRC1Q12796 327 aaPredicted RBP7.04□□□□□ -1.28
SF3A1-207ENST00000471342 ADIRFQ15847 76 aa7.04□□□□□ -1.28
SF3A1-207ENST00000471342 DEFB121Q5J5C9 76 aa7.04□□□□□ -1.28
SF3A1-207ENST00000471342 UFSP1Q6NVU6 142 aa7.04□□□□□ -1.28
SF3A1-207ENST00000471342 TMEM256Q8N2U0 113 aa7.04□□□□□ -1.28
SF3A1-207ENST00000471342 OR11H2Q8NH07 326 aa7.04□□□□□ -1.28
SF3A1-207ENST00000471342 NDFIP1Q9BT67 221 aa7.04□□□□□ -1.28
SF3A1-207ENST00000471342 RPP21Q9H633 154 aaKnown RBP7.04□□□□□ -1.28
SF3A1-207ENST00000471342 EDA2RQ9HAV5 297 aa7.04□□□□□ -1.28
SF3A1-207ENST00000471342 GSN-AS1Q9NRJ2 163 aa7.04□□□□□ -1.28
SF3A1-207ENST00000471342 KIF25-AS1Q9Y6Z4 181 aa7.04□□□□□ -1.28
SF3A1-207ENST00000471342 TMSB15BA0A087X1C1 80 aa7.03□□□□□ -1.28
SF3A1-207ENST00000471342 DEFB4AO15263 64 aa7.03□□□□□ -1.28
SF3A1-207ENST00000471342 SPINK4O60575 86 aa7.03□□□□□ -1.28
SF3A1-207ENST00000471342 CTRLP40313 264 aa7.03□□□□□ -1.28
SF3A1-207ENST00000471342 TCL1AP56279 114 aa7.03□□□□□ -1.28
SF3A1-207ENST00000471342 DAZ2Q13117 558 aaKnown RBP7.03□□□□□ -1.28
SF3A1-207ENST00000471342 IBA57Q5T440 356 aaKnown RBP7.03□□□□□ -1.28
SF3A1-207ENST00000471342 OR2D3Q8NGH3 330 aa7.03□□□□□ -1.28
SF3A1-207ENST00000471342 OR10G8Q8NGN5 311 aa7.03□□□□□ -1.28
SF3A1-207ENST00000471342 PTH2Q96A98 100 aa7.03□□□□□ -1.28
SF3A1-207ENST00000471342 RCHY1Q96PM5 261 aa7.03□□□□□ -1.28
SF3A1-207ENST00000471342 LINC01587Q99440 93 aa7.03□□□□□ -1.28
SF3A1-207ENST00000471342 C1QTNF4Q9BXJ3 329 aa7.03□□□□□ -1.28
SF3A1-207ENST00000471342 IL36BQ9NZH7 164 aa7.03□□□□□ -1.28
SF3A1-207ENST00000471342 MSRB1Q9NZV6 116 aa7.03□□□□□ -1.28
SF3A1-207ENST00000471342 A0A087WWC5 75 aa7.02□□□□□ -1.29
SF3A1-207ENST00000471342 A0A1B0GXF2 115 aa7.02□□□□□ -1.29
SF3A1-207ENST00000471342 SMIM9A6NGZ8 99 aa7.02□□□□□ -1.29
SF3A1-207ENST00000471342 B4DEV8 164 aa7.02□□□□□ -1.29
SF3A1-207ENST00000471342 APOC3P02656 99 aa7.02□□□□□ -1.29
SF3A1-207ENST00000471342 ARMS2P0C7Q2 107 aa7.02□□□□□ -1.29
SF3A1-207ENST00000471342 MED14OSP0DP75 135 aa7.02□□□□□ -1.29
SF3A1-207ENST00000471342 NUP35Q8NFH5 326 aa7.02□□□□□ -1.29
SF3A1-207ENST00000471342 OR10AG1Q8NH19 301 aa7.02□□□□□ -1.29
SF3A1-207ENST00000471342 TSKUQ8WUA8 353 aa7.02□□□□□ -1.29
SF3A1-207ENST00000471342 TMEM263Q8WUH6 116 aaKnown RBP7.02□□□□□ -1.29
SF3A1-207ENST00000471342 JPT2Q9H910 190 aa7.02□□□□□ -1.29
SF3A1-207ENST00000471342 TMEM242Q9NWH2 141 aa7.02□□□□□ -1.29
SF3A1-207ENST00000471342 IGHV3OR16-12A0A075B7B8 117 aa7.01□□□□□ -1.29
SF3A1-207ENST00000471342 TMEM189A5PLL7 270 aa7.01□□□□□ -1.29
SF3A1-207ENST00000471342 FAM231BA6NCW3 169 aa7.01□□□□□ -1.29
SF3A1-207ENST00000471342 GATCO43716 136 aaKnown RBP7.01□□□□□ -1.29
SF3A1-207ENST00000471342 P01737 135 aa7.01□□□□□ -1.29
SF3A1-207ENST00000471342 ORM1P02763 201 aa7.01□□□□□ -1.29
SF3A1-207ENST00000471342 OR5AL1P0C617 328 aa7.01□□□□□ -1.29
SF3A1-207ENST00000471342 ERVFC1-1P60608 527 aa7.01□□□□□ -1.29
SF3A1-207ENST00000471342 Q6ZSN1 163 aa7.01□□□□□ -1.29
SF3A1-207ENST00000471342 RASL10AQ92737 203 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms