RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 RIGQ13278 110 aa4.53□□□□□ -1.68
SMNDC1-204ENST00000471297 PSMG4Q5JS54 123 aa4.53□□□□□ -1.68
SMNDC1-204ENST00000471297 FOXI2Q6ZQN5 318 aa4.53□□□□□ -1.68
SMNDC1-204ENST00000471297 APRG1Q8IVJ8 170 aa4.53□□□□□ -1.68
SMNDC1-204ENST00000471297 NUP35Q8NFH5 326 aa4.53□□□□□ -1.68
SMNDC1-204ENST00000471297 BORCS7Q96B45 105 aa4.53□□□□□ -1.68
SMNDC1-204ENST00000471297 GPR61Q9BZJ8 451 aa4.53□□□□□ -1.68
SMNDC1-204ENST00000471297 FLNAP21333 2647 aaKnown RBP4.52□□□□□ -1.69
SMNDC1-204ENST00000471297 F2Z2F3 143 aa4.52□□□□□ -1.69
SMNDC1-204ENST00000471297 CA1P00915 261 aaPredicted RBP4.52□□□□□ -1.69
SMNDC1-204ENST00000471297 HLA-DQA1P01909 254 aa4.52□□□□□ -1.69
SMNDC1-204ENST00000471297 ORM1P02763 201 aa4.52□□□□□ -1.69
SMNDC1-204ENST00000471297 S100A8P05109 93 aa4.52□□□□□ -1.69
SMNDC1-204ENST00000471297 S100A6P06703 90 aa4.52□□□□□ -1.69
SMNDC1-204ENST00000471297 GPX1P07203 203 aa4.52□□□□□ -1.69
SMNDC1-204ENST00000471297 ZNF705DP0CH99 300 aaPredicted RBP4.52□□□□□ -1.69
SMNDC1-204ENST00000471297 ZNF705BP0CI00 300 aaPredicted RBP4.52□□□□□ -1.69
SMNDC1-204ENST00000471297 TCL1AP56279 114 aa4.52□□□□□ -1.69
SMNDC1-204ENST00000471297 DEFB131AP59861 70 aa4.52□□□□□ -1.69
SMNDC1-204ENST00000471297 FABP9Q0Z7S8 132 aa4.52□□□□□ -1.69
SMNDC1-204ENST00000471297 ACTL10Q5JWF8 245 aa4.52□□□□□ -1.69
SMNDC1-204ENST00000471297 TMEM61Q8N0U2 210 aa4.52□□□□□ -1.69
SMNDC1-204ENST00000471297 ZFAND2AQ8N6M9 145 aa4.52□□□□□ -1.69
SMNDC1-204ENST00000471297 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.52□□□□□ -1.69
SMNDC1-204ENST00000471297 PGLYRP4Q96LB8 373 aa4.52□□□□□ -1.69
SMNDC1-204ENST00000471297 SELENOKQ9Y6D0 94 aa4.52□□□□□ -1.69
SMNDC1-204ENST00000471297 HECTD1Q9ULT8 2610 aa4.52□□□□□ -1.69
SMNDC1-204ENST00000471297 ITPR2Q14571 2701 aa4.51□□□□□ -1.69
SMNDC1-204ENST00000471297 A0A1B0GUT8 65 aa4.51□□□□□ -1.69
SMNDC1-204ENST00000471297 A0A1B0GXF2 115 aa4.51□□□□□ -1.69
SMNDC1-204ENST00000471297 SNURFLB1AK76 121 aa4.51□□□□□ -1.69
SMNDC1-204ENST00000471297 KLLNB2CW77 178 aa4.51□□□□□ -1.69
SMNDC1-204ENST00000471297 F6UB75 175 aa4.51□□□□□ -1.69
SMNDC1-204ENST00000471297 PHOX2AO14813 284 aa4.51□□□□□ -1.69
SMNDC1-204ENST00000471297 SPINK4O60575 86 aa4.51□□□□□ -1.69
SMNDC1-204ENST00000471297 SAP30O75446 220 aa4.51□□□□□ -1.69
SMNDC1-204ENST00000471297 IGLV1-51P01701 117 aa4.51□□□□□ -1.69
SMNDC1-204ENST00000471297 TRGC1P0CF51 173 aa4.51□□□□□ -1.69
SMNDC1-204ENST00000471297 INSL3P51460 131 aa4.51□□□□□ -1.69
SMNDC1-204ENST00000471297 RAB4BP61018 213 aa4.51□□□□□ -1.69
SMNDC1-204ENST00000471297 HBBP68871 147 aa4.51□□□□□ -1.69
SMNDC1-204ENST00000471297 HIST2H2BDQ6DRA6 164 aa4.51□□□□□ -1.69
SMNDC1-204ENST00000471297 MRPL54Q6P161 138 aaKnown RBP4.51□□□□□ -1.69
SMNDC1-204ENST00000471297 TMEM136Q6ZRR5 245 aa4.51□□□□□ -1.69
SMNDC1-204ENST00000471297 ZFP82Q8N141 532 aa4.51□□□□□ -1.69
SMNDC1-204ENST00000471297 FER1L6-AS1Q8NA97 138 aa4.51□□□□□ -1.69
SMNDC1-204ENST00000471297 NTN5Q8WTR8 489 aaPredicted RBP4.51□□□□□ -1.69
SMNDC1-204ENST00000471297 GTSF1Q8WW33 167 aa4.51□□□□□ -1.69
SMNDC1-204ENST00000471297 FRZBQ92765 325 aa4.51□□□□□ -1.69
SMNDC1-204ENST00000471297 CITED1Q99966 193 aa4.51□□□□□ -1.69
SMNDC1-204ENST00000471297 FAM110AQ9BQ89 295 aa4.51□□□□□ -1.69
SMNDC1-204ENST00000471297 ZNF256Q9Y2P7 627 aaPredicted RBP4.51□□□□□ -1.69
SMNDC1-204ENST00000471297 MYO9AB2RTY4 2548 aa4.51□□□□□ -1.69
SMNDC1-204ENST00000471297 ASH1LQ9NR48 2969 aaKnown RBP4.5□□□□□ -1.69
SMNDC1-204ENST00000471297 LOC105371267A0A1B0GV96 52 aa4.5□□□□□ -1.69
SMNDC1-204ENST00000471297 C7orf71A4D174 169 aa4.5□□□□□ -1.69
SMNDC1-204ENST00000471297 A8MTW9 85 aa4.5□□□□□ -1.69
SMNDC1-204ENST00000471297 H3BMM0 161 aa4.5□□□□□ -1.69
SMNDC1-204ENST00000471297 HIST1H2BKO60814 126 aa4.5□□□□□ -1.69
SMNDC1-204ENST00000471297 APCSP02743 223 aa4.5□□□□□ -1.69
SMNDC1-204ENST00000471297 AMBPP02760 352 aa4.5□□□□□ -1.69
SMNDC1-204ENST00000471297 HIST1H2BJP06899 126 aa4.5□□□□□ -1.69
SMNDC1-204ENST00000471297 IGLC6P0CF74 106 aa4.5□□□□□ -1.69
SMNDC1-204ENST00000471297 GZMBP10144 247 aa4.5□□□□□ -1.69
SMNDC1-204ENST00000471297 HLA-DRB4P13762 266 aa4.5□□□□□ -1.69
SMNDC1-204ENST00000471297 HIST1H2BOP23527 126 aa4.5□□□□□ -1.69
SMNDC1-204ENST00000471297 HIST1H2BBP33778 126 aa4.5□□□□□ -1.69
SMNDC1-204ENST00000471297 RNASE4P34096 147 aaKnown RBP4.5□□□□□ -1.69
SMNDC1-204ENST00000471297 CDKN1BP46527 198 aa4.5□□□□□ -1.69
SMNDC1-204ENST00000471297 NDUFA6P56556 154 aa4.5□□□□□ -1.69
SMNDC1-204ENST00000471297 HIST1H2BDP58876 126 aa4.5□□□□□ -1.69
SMNDC1-204ENST00000471297 HIST1H2BCP62807 126 aa4.5□□□□□ -1.69
SMNDC1-204ENST00000471297 HIST2H2BEQ16778 126 aa4.5□□□□□ -1.69
SMNDC1-204ENST00000471297 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.5□□□□□ -1.69
SMNDC1-204ENST00000471297 DNLZQ5SXM8 178 aa4.5□□□□□ -1.69
SMNDC1-204ENST00000471297 C9orf66Q5T8R8 295 aa4.5□□□□□ -1.69
SMNDC1-204ENST00000471297 LYZL1Q6UWQ5 148 aa4.5□□□□□ -1.69
SMNDC1-204ENST00000471297 GATD1Q8NB37 220 aa4.5□□□□□ -1.69
SMNDC1-204ENST00000471297 HIST1H2BHQ93079 126 aa4.5□□□□□ -1.69
SMNDC1-204ENST00000471297 KCNS1Q96KK3 526 aa4.5□□□□□ -1.69
SMNDC1-204ENST00000471297 HIST1H2BNQ99877 126 aa4.5□□□□□ -1.69
SMNDC1-204ENST00000471297 HIST1H2BMQ99879 126 aa4.5□□□□□ -1.69
SMNDC1-204ENST00000471297 MAP6D1Q9H9H5 199 aa4.5□□□□□ -1.69
SMNDC1-204ENST00000471297 HLA-DRB4X5D2U9 266 aa4.5□□□□□ -1.69
SMNDC1-204ENST00000471297 CSMD2Q7Z408 3487 aa4.49□□□□□ -1.69
SMNDC1-204ENST00000471297 ACANP16112 2415 aa4.49□□□□□ -1.69
SMNDC1-204ENST00000471297 SONP18583 2426 aaKnown RBP4.49□□□□□ -1.69
SMNDC1-204ENST00000471297 TMSB15BA0A087X1C1 80 aa4.49□□□□□ -1.69
SMNDC1-204ENST00000471297 IGKV3D-20A0A0C4DH25 116 aa4.49□□□□□ -1.69
SMNDC1-204ENST00000471297 C5orf52A6NGY3 159 aa4.49□□□□□ -1.69
SMNDC1-204ENST00000471297 KNCNA6PVL3 124 aa4.49□□□□□ -1.69
SMNDC1-204ENST00000471297 CYSRT1A8MQ03 144 aa4.49□□□□□ -1.69
SMNDC1-204ENST00000471297 OR11H12B2RN74 326 aa4.49□□□□□ -1.69
SMNDC1-204ENST00000471297 SNAI2O43623 268 aa4.49□□□□□ -1.69
SMNDC1-204ENST00000471297 CTRLP40313 264 aa4.49□□□□□ -1.69
SMNDC1-204ENST00000471297 ASIPP42127 132 aa4.49□□□□□ -1.69
SMNDC1-204ENST00000471297 DEFB1P60022 68 aa4.49□□□□□ -1.69
SMNDC1-204ENST00000471297 CACNG7P62955 275 aa4.49□□□□□ -1.69
SMNDC1-204ENST00000471297 PRR9Q5T870 116 aa4.49□□□□□ -1.69
SMNDC1-204ENST00000471297 GDF5OSQ5U4N7 250 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 251.1 ms