RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 DKK1O94907 266 aa11.22□□□□□ -0.61
HDAC7-219ENST00000470668 ZNF672Q499Z4 452 aaPredicted RBP11.22□□□□□ -0.61
HDAC7-219ENST00000470668 TEN1Q86WV5 123 aa11.22□□□□□ -0.61
HDAC7-219ENST00000470668 COL4A4P53420 1690 aaPredicted RBP11.22□□□□□ -0.61
HDAC7-219ENST00000470668 K7EM74 188 aa11.22□□□□□ -0.61
HDAC7-219ENST00000470668 J3QQQ9 107 aa11.21□□□□□ -0.61
HDAC7-219ENST00000470668 KRTAP27-1Q3LI81 207 aa11.21□□□□□ -0.61
HDAC7-219ENST00000470668 TEX36Q5VZQ5 186 aa11.21□□□□□ -0.61
HDAC7-219ENST00000470668 IGFBPL1Q8WX77 278 aa11.21□□□□□ -0.61
HDAC7-219ENST00000470668 ANKRD11Q6UB99 2663 aaPredicted RBP11.21□□□□□ -0.61
HDAC7-219ENST00000470668 A0A1B0GXF2 115 aa11.21□□□□□ -0.61
HDAC7-219ENST00000470668 SDHAF1A6NFY7 115 aa11.21□□□□□ -0.61
HDAC7-219ENST00000470668 C9orf139Q6ZV77 190 aa11.21□□□□□ -0.61
HDAC7-219ENST00000470668 LINC01587Q99440 93 aa11.21□□□□□ -0.61
HDAC7-219ENST00000470668 HCFC1P51610 2035 aa11.21□□□□□ -0.62
HDAC7-219ENST00000470668 ITLN2Q8WWU7 325 aaPredicted RBP11.21□□□□□ -0.62
HDAC7-219ENST00000470668 ABCA2Q9BZC7 2435 aa11.21□□□□□ -0.62
HDAC7-219ENST00000470668 VMO1Q7Z5L0 202 aa11.2□□□□□ -0.62
HDAC7-219ENST00000470668 DYNAPQ8N1N2 210 aa11.2□□□□□ -0.62
HDAC7-219ENST00000470668 TMEM190Q8WZ59 177 aa11.2□□□□□ -0.62
HDAC7-219ENST00000470668 CARD19Q96LW7 228 aa11.2□□□□□ -0.62
HDAC7-219ENST00000470668 LINC00477Q96M19 166 aa11.2□□□□□ -0.62
HDAC7-219ENST00000470668 MT-ATP8P03928 68 aa11.2□□□□□ -0.62
HDAC7-219ENST00000470668 RNF5Q99942 180 aa11.2□□□□□ -0.62
HDAC7-219ENST00000470668 KIAA1549LQ6ZVL6 1849 aa11.2□□□□□ -0.62
HDAC7-219ENST00000470668 IGKV1-17P01599 117 aa11.19□□□□□ -0.62
HDAC7-219ENST00000470668 LOXP28300 417 aaPredicted RBP11.19□□□□□ -0.62
HDAC7-219ENST00000470668 LINC00158P58513 81 aa11.19□□□□□ -0.62
HDAC7-219ENST00000470668 CFC1BP0CG36 223 aa11.19□□□□□ -0.62
HDAC7-219ENST00000470668 CFC1P0CG37 223 aa11.19□□□□□ -0.62
HDAC7-219ENST00000470668 ODF1Q14990 250 aa11.19□□□□□ -0.62
HDAC7-219ENST00000470668 PHLDA1Q8WV24 401 aaPredicted RBP11.19□□□□□ -0.62
HDAC7-219ENST00000470668 KNCNA6PVL3 124 aa11.19□□□□□ -0.62
HDAC7-219ENST00000470668 UTF1Q5T230 341 aa11.19□□□□□ -0.62
HDAC7-219ENST00000470668 MORN3Q6PF18 240 aaPredicted RBP11.19□□□□□ -0.62
HDAC7-219ENST00000470668 TRAV13-1A0A0B4J241 112 aa11.18□□□□□ -0.62
HDAC7-219ENST00000470668 PRIMA1Q86XR5 153 aa11.18□□□□□ -0.62
HDAC7-219ENST00000470668 ANKRD29Q8N6D5 301 aa11.18□□□□□ -0.62
HDAC7-219ENST00000470668 LY6G5BQ8NDX9 201 aa11.18□□□□□ -0.62
HDAC7-219ENST00000470668 CFHR4Q92496 578 aa11.18□□□□□ -0.62
HDAC7-219ENST00000470668 MBD6Q96DN6 1003 aa11.18□□□□□ -0.62
HDAC7-219ENST00000470668 C1orf159Q96HA4 380 aa11.18□□□□□ -0.62
HDAC7-219ENST00000470668 LTBP2Q14767 1821 aa11.18□□□□□ -0.62
HDAC7-219ENST00000470668 FOXE3Q13461 319 aa11.18□□□□□ -0.62
HDAC7-219ENST00000470668 Q8N976 141 aa11.18□□□□□ -0.62
HDAC7-219ENST00000470668 HIGD1BQ9P298 99 aa11.18□□□□□ -0.62
HDAC7-219ENST00000470668 IGLV3-9A0A075B6K5 115 aa11.18□□□□□ -0.62
HDAC7-219ENST00000470668 G3V318 75 aa11.18□□□□□ -0.62
HDAC7-219ENST00000470668 RITA1Q96K30 269 aa11.18□□□□□ -0.62
HDAC7-219ENST00000470668 C19orf71A6NCJ1 209 aa11.17□□□□□ -0.62
HDAC7-219ENST00000470668 WISP2O76076 250 aa11.17□□□□□ -0.62
HDAC7-219ENST00000470668 AGPAT4-IT1Q9H0P7 198 aa11.17□□□□□ -0.62
HDAC7-219ENST00000470668 TRAV41A0A0B4J266 112 aa11.17□□□□□ -0.62
HDAC7-219ENST00000470668 PAX4O43316 350 aa11.17□□□□□ -0.62
HDAC7-219ENST00000470668 RNASE13Q5GAN3 156 aaKnown RBP11.17□□□□□ -0.62
HDAC7-219ENST00000470668 A4D1N5 150 aa11.16□□□□□ -0.62
HDAC7-219ENST00000470668 RBMY1BA6NDE4 496 aaKnown RBP11.16□□□□□ -0.62
HDAC7-219ENST00000470668 RBMY1EA6NEQ0 496 aaKnown RBP11.16□□□□□ -0.62
HDAC7-219ENST00000470668 RBMY1DP0C7P1 496 aaKnown RBP11.16□□□□□ -0.62
HDAC7-219ENST00000470668 RBMY1A1P0DJD3 496 aaKnown RBP11.16□□□□□ -0.62
HDAC7-219ENST00000470668 RBMY1CP0DJD4 496 aa11.16□□□□□ -0.62
HDAC7-219ENST00000470668 PRR30Q53SZ7 412 aaPredicted RBP11.16□□□□□ -0.62
HDAC7-219ENST00000470668 RPL39LQ96EH5 51 aaKnown RBP11.16□□□□□ -0.62
HDAC7-219ENST00000470668 NDUFA12Q9UI09 145 aa11.16□□□□□ -0.62
HDAC7-219ENST00000470668 IGKV2D-26A0A0A0MRZ7 120 aa11.16□□□□□ -0.62
HDAC7-219ENST00000470668 CRPP02741 224 aa11.16□□□□□ -0.62
HDAC7-219ENST00000470668 LGALS1P09382 135 aaKnown RBP11.16□□□□□ -0.62
HDAC7-219ENST00000470668 WT1P19544 449 aaPredicted RBP11.16□□□□□ -0.62
HDAC7-219ENST00000470668 GATA4P43694 442 aa11.16□□□□□ -0.62
HDAC7-219ENST00000470668 HERV-K104P63124 156 aa11.16□□□□□ -0.62
HDAC7-219ENST00000470668 SPANXB1Q9NS25 103 aaPredicted RBP11.16□□□□□ -0.62
HDAC7-219ENST00000470668 ARHGAP32A7KAX9 2087 aa11.16□□□□□ -0.62
HDAC7-219ENST00000470668 C11orf68Q9H3H3 251 aaKnown RBP11.15□□□□□ -0.62
HDAC7-219ENST00000470668 IGHG3P01860 377 aa11.15□□□□□ -0.62
HDAC7-219ENST00000470668 MBD3L4A6NDZ8 208 aaPredicted RBP11.15□□□□□ -0.63
HDAC7-219ENST00000470668 MBD3L3A6NE82 208 aaPredicted RBP11.15□□□□□ -0.63
HDAC7-219ENST00000470668 MBD3L5A6NJ08 208 aaPredicted RBP11.15□□□□□ -0.63
HDAC7-219ENST00000470668 ZNF493Q6ZR52 646 aa11.15□□□□□ -0.63
HDAC7-219ENST00000470668 C2orf91Q6ZV80 131 aa11.15□□□□□ -0.63
HDAC7-219ENST00000470668 MBD3L2Q8NHZ7 208 aaPredicted RBP11.15□□□□□ -0.63
HDAC7-219ENST00000470668 SPANXA1Q9NS26 97 aa11.15□□□□□ -0.63
HDAC7-219ENST00000470668 Q6ZUT4 128 aa11.14□□□□□ -0.63
HDAC7-219ENST00000470668 RHPN1-AS1Q9BWJ2 59 aa11.14□□□□□ -0.63
HDAC7-219ENST00000470668 LY6DQ14210 128 aa11.14□□□□□ -0.63
HDAC7-219ENST00000470668 PRSS22Q9GZN4 317 aa11.14□□□□□ -0.63
HDAC7-219ENST00000470668 CR1LQ2VPA4 569 aa11.14□□□□□ -0.63
HDAC7-219ENST00000470668 DUSP14O95147 198 aaKnown RBP11.13□□□□□ -0.63
HDAC7-219ENST00000470668 IGLV1-44P01699 117 aa11.13□□□□□ -0.63
HDAC7-219ENST00000470668 SHISA9B4DS77 424 aa11.13□□□□□ -0.63
HDAC7-219ENST00000470668 ATP6V0E1O15342 81 aa11.13□□□□□ -0.63
HDAC7-219ENST00000470668 ZFP2Q6ZN57 461 aa11.13□□□□□ -0.63
HDAC7-219ENST00000470668 TRGV2A0A075B6R0 118 aa11.12□□□□□ -0.63
HDAC7-219ENST00000470668 A0A0G2JNJ9 132 aa11.12□□□□□ -0.63
HDAC7-219ENST00000470668 OVOL3O00110 214 aa11.12□□□□□ -0.63
HDAC7-219ENST00000470668 MRPL23Q16540 153 aaKnown RBP11.12□□□□□ -0.63
HDAC7-219ENST00000470668 Q9UFV3 132 aa11.12□□□□□ -0.63
HDAC7-219ENST00000470668 F6UB75 175 aa11.12□□□□□ -0.63
HDAC7-219ENST00000470668 BRD3OSQ6XYD6 125 aa11.12□□□□□ -0.63
HDAC7-219ENST00000470668 GNRH2O43555 120 aa11.12□□□□□ -0.63
HDAC7-219ENST00000470668 C7orf69Q9H7B7 122 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms