RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 TRAPPC2BP0DI82 140 aa2.33□□□□□ -2.04
COL11A1-208ENST00000470170 COX7CP15954 63 aa2.33□□□□□ -2.04
COL11A1-208ENST00000470170 Q0VG73 95 aa2.33□□□□□ -2.04
COL11A1-208ENST00000470170 SPANXN5Q5MJ07 72 aa2.33□□□□□ -2.04
COL11A1-208ENST00000470170 ST20-AS1Q8NBB2 130 aa2.33□□□□□ -2.04
COL11A1-208ENST00000470170 KLF14Q8TD94 323 aaPredicted RBP2.33□□□□□ -2.04
COL11A1-208ENST00000470170 NUP98P52948 1817 aa2.33□□□□□ -2.04
COL11A1-208ENST00000470170 PHIPQ8WWQ0 1821 aa2.33□□□□□ -2.04
COL11A1-208ENST00000470170 MAGI2Q86UL8 1455 aa2.33□□□□□ -2.04
COL11A1-208ENST00000470170 EFCAB5A4FU69 1503 aa2.32□□□□□ -2.04
COL11A1-208ENST00000470170 MYH9P35579 1960 aaKnown RBP2.32□□□□□ -2.04
COL11A1-208ENST00000470170 UNC13BO14795 1591 aa2.32□□□□□ -2.04
COL11A1-208ENST00000470170 QRICH2Q9H0J4 1663 aa2.32□□□□□ -2.04
COL11A1-208ENST00000470170 ANKRD26Q9UPS8 1709 aa2.32□□□□□ -2.04
COL11A1-208ENST00000470170 IGHV1-18A0A0C4DH31 117 aa2.32□□□□□ -2.04
COL11A1-208ENST00000470170 LOC107984156A0A0G2JMH3 177 aa2.32□□□□□ -2.04
COL11A1-208ENST00000470170 UBE2L5PA0A1B0GUS4 154 aa2.32□□□□□ -2.04
COL11A1-208ENST00000470170 MT-ATP8P03928 68 aa2.32□□□□□ -2.04
COL11A1-208ENST00000470170 BAALC-AS2P0C853 105 aa2.32□□□□□ -2.04
COL11A1-208ENST00000470170 SNCAP37840 140 aa2.32□□□□□ -2.04
COL11A1-208ENST00000470170 POLR2JP52435 117 aaKnown RBP2.32□□□□□ -2.04
COL11A1-208ENST00000470170 UBE2L3P68036 154 aaKnown RBP2.32□□□□□ -2.04
COL11A1-208ENST00000470170 FAM27BQ5VT28 67 aa2.32□□□□□ -2.04
COL11A1-208ENST00000470170 ZNF720Q7Z2F6 126 aa2.32□□□□□ -2.04
COL11A1-208ENST00000470170 ARL17AQ8IVW1 177 aa2.32□□□□□ -2.04
COL11A1-208ENST00000470170 LINC00304Q8N9R0 145 aa2.32□□□□□ -2.04
COL11A1-208ENST00000470170 C10orf105Q8TEF2 133 aa2.32□□□□□ -2.04
COL11A1-208ENST00000470170 DPH3P1Q9H4G8 78 aa2.32□□□□□ -2.04
COL11A1-208ENST00000470170 NPVFQ9HCQ7 196 aa2.32□□□□□ -2.04
COL11A1-208ENST00000470170 HHLA3Q9XRX5 114 aa2.32□□□□□ -2.04
COL11A1-208ENST00000470170 MYH6P13533 1939 aa2.32□□□□□ -2.04
COL11A1-208ENST00000470170 AKAP11Q9UKA4 1901 aa2.32□□□□□ -2.04
COL11A1-208ENST00000470170 UACAQ9BZF9 1416 aa2.32□□□□□ -2.04
COL11A1-208ENST00000470170 NUP214P35658 2090 aaPredicted RBP2.32□□□□□ -2.04
COL11A1-208ENST00000470170 SHANK3Q9BYB0 1731 aa2.31□□□□□ -2.04
COL11A1-208ENST00000470170 RBBP6Q7Z6E9 1792 aaKnown RBP2.31□□□□□ -2.04
COL11A1-208ENST00000470170 IGHV3-64A0A075B6Q5 118 aa2.31□□□□□ -2.04
COL11A1-208ENST00000470170 A6NN06 94 aa2.31□□□□□ -2.04
COL11A1-208ENST00000470170 ROMO1P60602 79 aa2.31□□□□□ -2.04
COL11A1-208ENST00000470170 Q6ZQT0 140 aa2.31□□□□□ -2.04
COL11A1-208ENST00000470170 SBSPONQ8IVN8 264 aa2.31□□□□□ -2.04
COL11A1-208ENST00000470170 Q8IYB0 196 aa2.31□□□□□ -2.04
COL11A1-208ENST00000470170 Q8N814 137 aa2.31□□□□□ -2.04
COL11A1-208ENST00000470170 LINC00301Q8NCQ3 95 aa2.31□□□□□ -2.04
COL11A1-208ENST00000470170 C10orf82Q8WW14 230 aa2.31□□□□□ -2.04
COL11A1-208ENST00000470170 CXCL16Q9H2A7 254 aa2.31□□□□□ -2.04
COL11A1-208ENST00000470170 CCDC141Q6ZP82 1450 aa2.31□□□□□ -2.04
COL11A1-208ENST00000470170 ABCA8O94911 1581 aa2.31□□□□□ -2.04
COL11A1-208ENST00000470170 ROBO1Q9Y6N7 1651 aa2.31□□□□□ -2.04
COL11A1-208ENST00000470170 WDR90Q96KV7 1748 aa2.31□□□□□ -2.04
COL11A1-208ENST00000470170 ANAPC1Q9H1A4 1944 aa2.3□□□□□ -2.04
COL11A1-208ENST00000470170 TRAV2A0A0B4J234 112 aa2.3□□□□□ -2.04
COL11A1-208ENST00000470170 A0A1B0GU33 70 aa2.3□□□□□ -2.04
COL11A1-208ENST00000470170 A6NIN4 97 aa2.3□□□□□ -2.04
COL11A1-208ENST00000470170 GNGT2O14610 69 aa2.3□□□□□ -2.04
COL11A1-208ENST00000470170 UBL3O95164 117 aa2.3□□□□□ -2.04
COL11A1-208ENST00000470170 CYB5AP00167 134 aa2.3□□□□□ -2.04
COL11A1-208ENST00000470170 CRPP02741 224 aa2.3□□□□□ -2.04
COL11A1-208ENST00000470170 PIRTP0C851 137 aa2.3□□□□□ -2.04
COL11A1-208ENST00000470170 MGST1P10620 155 aaKnown RBP2.3□□□□□ -2.04
COL11A1-208ENST00000470170 DEFA4P12838 97 aa2.3□□□□□ -2.04
COL11A1-208ENST00000470170 ZNF22P17026 224 aaPredicted RBP2.3□□□□□ -2.04
COL11A1-208ENST00000470170 NNATQ16517 81 aa2.3□□□□□ -2.04
COL11A1-208ENST00000470170 FAM74A1Q5RGS3 127 aa2.3□□□□□ -2.04
COL11A1-208ENST00000470170 SPANXN1Q5VSR9 72 aa2.3□□□□□ -2.04
COL11A1-208ENST00000470170 LINC00299Q6ZSB3 139 aa2.3□□□□□ -2.04
COL11A1-208ENST00000470170 SLC25A26Q70HW3 274 aa2.3□□□□□ -2.04
COL11A1-208ENST00000470170 FP248Q71RG6 208 aaPredicted RBP2.3□□□□□ -2.04
COL11A1-208ENST00000470170 C5orf38Q86SI9 138 aa2.3□□□□□ -2.04
COL11A1-208ENST00000470170 C15orf53Q8NAA6 179 aa2.3□□□□□ -2.04
COL11A1-208ENST00000470170 DYNLRB2Q8TF09 96 aa2.3□□□□□ -2.04
COL11A1-208ENST00000470170 MUCL1Q96DR8 90 aa2.3□□□□□ -2.04
COL11A1-208ENST00000470170 OR8B2Q96RD0 313 aa2.3□□□□□ -2.04
COL11A1-208ENST00000470170 DSCR8Q96T75 97 aa2.3□□□□□ -2.04
COL11A1-208ENST00000470170 CRCT1Q9UGL9 99 aa2.3□□□□□ -2.04
COL11A1-208ENST00000470170 RABAC1Q9UI14 185 aa2.3□□□□□ -2.04
COL11A1-208ENST00000470170 ABCC3O15438 1527 aa2.3□□□□□ -2.04
COL11A1-208ENST00000470170 ARHGAP5Q13017 1502 aa2.3□□□□□ -2.04
COL11A1-208ENST00000470170 WNK3Q9BYP7 1800 aa2.3□□□□□ -2.04
COL11A1-208ENST00000470170 DOCK8Q8NF50 2099 aa2.3□□□□□ -2.04
COL11A1-208ENST00000470170 CITO14578 2027 aa2.29□□□□□ -2.04
COL11A1-208ENST00000470170 FRMPD1Q5SYB0 1578 aa2.29□□□□□ -2.04
COL11A1-208ENST00000470170 IGKV2D-26A0A0A0MRZ7 120 aa2.29□□□□□ -2.04
COL11A1-208ENST00000470170 TRAV14DV4A0A0A6YYC5 116 aa2.29□□□□□ -2.04
COL11A1-208ENST00000470170 TRAV3A0A0B4J244 114 aa2.29□□□□□ -2.04
COL11A1-208ENST00000470170 RBAKDNA6NC62 111 aa2.29□□□□□ -2.04
COL11A1-208ENST00000470170 K7EP34 96 aa2.29□□□□□ -2.04
COL11A1-208ENST00000470170 IGLV1-51P01701 117 aa2.29□□□□□ -2.04
COL11A1-208ENST00000470170 CLPSP04118 112 aa2.29□□□□□ -2.04
COL11A1-208ENST00000470170 KRTDAPP60985 99 aa2.29□□□□□ -2.04
COL11A1-208ENST00000470170 C1orf134Q5TEV5 83 aa2.29□□□□□ -2.04
COL11A1-208ENST00000470170 TMEM136Q6ZRR5 245 aa2.29□□□□□ -2.04
COL11A1-208ENST00000470170 Q8NAQ8 132 aa2.29□□□□□ -2.04
COL11A1-208ENST00000470170 TMEM254Q8TBM7 123 aa2.29□□□□□ -2.04
COL11A1-208ENST00000470170 HIGD2AQ9BW72 106 aa2.29□□□□□ -2.04
COL11A1-208ENST00000470170 SMCO4Q9NRQ5 59 aa2.29□□□□□ -2.04
COL11A1-208ENST00000470170 UQCR10Q9UDW1 63 aa2.29□□□□□ -2.04
COL11A1-208ENST00000470170 MINOS1-NBL1R4GNA1 71 aa2.29□□□□□ -2.04
COL11A1-208ENST00000470170 SVILO95425 2214 aa2.29□□□□□ -2.04
COL11A1-208ENST00000470170 TUBGCP6Q96RT7 1819 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms