RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 GRIFINA4D1Z8 144 aa13.08□□□□□ -0.32
MRPL28-208ENST00000469744 PCP4L1A6NKN8 68 aa13.08□□□□□ -0.32
MRPL28-208ENST00000469744 C3orf84H3BNL1 204 aa13.07□□□□□ -0.32
MRPL28-208ENST00000469744 CRIP1P50238 77 aa13.07□□□□□ -0.32
MRPL28-208ENST00000469744 GDF5OSQ5U4N7 250 aa13.07□□□□□ -0.32
MRPL28-208ENST00000469744 BAGE3Q86Y29 109 aa13.07□□□□□ -0.32
MRPL28-208ENST00000469744 GATD1Q8NB37 220 aa13.07□□□□□ -0.32
MRPL28-208ENST00000469744 GLMPQ8WWB7 406 aa13.07□□□□□ -0.32
MRPL28-208ENST00000469744 FAM110AQ9BQ89 295 aa13.07□□□□□ -0.32
MRPL28-208ENST00000469744 DAZ1Q9NQZ3 744 aaKnown RBP13.07□□□□□ -0.32
MRPL28-208ENST00000469744 GSN-AS1Q9NRJ2 163 aa13.07□□□□□ -0.32
MRPL28-208ENST00000469744 IGKV2-40A0A087WW87 121 aaPredicted RBP13.06□□□□□ -0.32
MRPL28-208ENST00000469744 IGKV2D-40P01614 121 aaPredicted RBP13.06□□□□□ -0.32
MRPL28-208ENST00000469744 BMI1P35226 326 aa13.06□□□□□ -0.32
MRPL28-208ENST00000469744 RPS20P60866 119 aaKnown RBP13.06□□□□□ -0.32
MRPL28-208ENST00000469744 NDFIP1Q9BT67 221 aa13.06□□□□□ -0.32
MRPL28-208ENST00000469744 A0A1W2PS18 150 aa13.05□□□□□ -0.32
MRPL28-208ENST00000469744 APOHP02749 345 aaPredicted RBP13.05□□□□□ -0.32
MRPL28-208ENST00000469744 LINC00310P59036 64 aa13.05□□□□□ -0.32
MRPL28-208ENST00000469744 SLAQ13239 276 aa13.05□□□□□ -0.32
MRPL28-208ENST00000469744 RIGQ13278 110 aa13.05□□□□□ -0.32
MRPL28-208ENST00000469744 FAM162BQ5T6X4 162 aa13.05□□□□□ -0.32
MRPL28-208ENST00000469744 PGLYRP4Q96LB8 373 aa13.05□□□□□ -0.32
MRPL28-208ENST00000469744 PPP1R14DQ9NXH3 145 aa13.05□□□□□ -0.32
MRPL28-208ENST00000469744 DNAH7Q8WXX0 4024 aa13.05□□□□□ -0.32
MRPL28-208ENST00000469744 NUPR1O60356 82 aa13.04□□□□□ -0.32
MRPL28-208ENST00000469744 SERF1AO75920 110 aa13.04□□□□□ -0.32
MRPL28-208ENST00000469744 SRIP30626 198 aa13.04□□□□□ -0.32
MRPL28-208ENST00000469744 CASC10Q5T4H9 136 aa13.04□□□□□ -0.32
MRPL28-208ENST00000469744 C8orf49Q96NF6 230 aa13.04□□□□□ -0.32
MRPL28-208ENST00000469744 EDA2RQ9HAV5 297 aa13.04□□□□□ -0.32
MRPL28-208ENST00000469744 IGHV3-49A0A0A0MS15 119 aa13.04□□□□□ -0.32
MRPL28-208ENST00000469744 TRAV8-2A0A0B4J237 113 aa13.04□□□□□ -0.32
MRPL28-208ENST00000469744 TRAV25A0A0B4J276 109 aa13.04□□□□□ -0.32
MRPL28-208ENST00000469744 A0A1B0GUT8 65 aa13.04□□□□□ -0.32
MRPL28-208ENST00000469744 K7EMT4 169 aa13.04□□□□□ -0.32
MRPL28-208ENST00000469744 GZMBP10144 247 aa13.04□□□□□ -0.32
MRPL28-208ENST00000469744 KIAA1644Q3SXP7 199 aa13.04□□□□□ -0.32
MRPL28-208ENST00000469744 ZFAND6Q6FIF0 208 aa13.04□□□□□ -0.32
MRPL28-208ENST00000469744 VGLL1Q99990 258 aa13.04□□□□□ -0.32
MRPL28-208ENST00000469744 TMEM189A5PLL7 270 aa13.03□□□□□ -0.32
MRPL28-208ENST00000469744 SH2D1AO60880 128 aa13.03□□□□□ -0.32
MRPL28-208ENST00000469744 HLA-DMBP28068 263 aa13.03□□□□□ -0.32
MRPL28-208ENST00000469744 CAMPP49913 170 aa13.03□□□□□ -0.32
MRPL28-208ENST00000469744 DMRTA1Q5VZB9 504 aa13.03□□□□□ -0.32
MRPL28-208ENST00000469744 ALKBH7Q9BT30 221 aaPredicted RBP13.03□□□□□ -0.32
MRPL28-208ENST00000469744 TENM2Q9NT68 2774 aa13.02□□□□□ -0.32
MRPL28-208ENST00000469744 RYR3Q15413 4870 aa13.02□□□□□ -0.33
MRPL28-208ENST00000469744 BORCS7Q96B45 105 aa13.02□□□□□ -0.33
MRPL28-208ENST00000469744 IGHV3OR16-13A0A075B7E8 117 aa13.01□□□□□ -0.33
MRPL28-208ENST00000469744 IGHV3-74A0A0B4J1X5 117 aa13.01□□□□□ -0.33
MRPL28-208ENST00000469744 IGHV3-66A0A0C4DH42 116 aa13.01□□□□□ -0.33
MRPL28-208ENST00000469744 ZNF705FA8MVS1 300 aaPredicted RBP13.01□□□□□ -0.33
MRPL28-208ENST00000469744 C9orf47Q6ZRZ4 202 aa13.01□□□□□ -0.33
MRPL28-208ENST00000469744 C18orf32Q8TCD1 76 aa13.01□□□□□ -0.33
MRPL28-208ENST00000469744 KCNS1Q96KK3 526 aa13.01□□□□□ -0.33
MRPL28-208ENST00000469744 SPAG8Q99932 426 aaPredicted RBP13.01□□□□□ -0.33
MRPL28-208ENST00000469744 SMPXQ9UHP9 88 aa13.01□□□□□ -0.33
MRPL28-208ENST00000469744 LENEPQ9Y5L5 61 aa13.01□□□□□ -0.33
MRPL28-208ENST00000469744 IQCJQ1A5X6 159 aa13□□□□□ -0.33
MRPL28-208ENST00000469744 IGFL4Q6B9Z1 124 aa13□□□□□ -0.33
MRPL28-208ENST00000469744 IGHV7-4-1A0A0J9YVY3 117 aa12.99□□□□□ -0.33
MRPL28-208ENST00000469744 FABP5P3A8MUU1 101 aa12.99□□□□□ -0.33
MRPL28-208ENST00000469744 PRAC2D3DTV9 90 aa12.99□□□□□ -0.33
MRPL28-208ENST00000469744 F2Z2F3 143 aa12.99□□□□□ -0.33
MRPL28-208ENST00000469744 GPX1P07203 203 aa12.99□□□□□ -0.33
MRPL28-208ENST00000469744 ZNF138P52744 262 aa12.99□□□□□ -0.33
MRPL28-208ENST00000469744 SAMD13Q5VXD3 122 aa12.99□□□□□ -0.33
MRPL28-208ENST00000469744 RHPN1-AS1Q9BWJ2 59 aa12.99□□□□□ -0.33
MRPL28-208ENST00000469744 IGKV3-7A0A075B6H7 116 aa12.98□□□□□ -0.33
MRPL28-208ENST00000469744 HIST1H1AQ02539 215 aaPredicted RBP12.98□□□□□ -0.33
MRPL28-208ENST00000469744 ODF3L2Q3SX64 289 aa12.98□□□□□ -0.33
MRPL28-208ENST00000469744 ZNF493Q6ZR52 646 aa12.98□□□□□ -0.33
MRPL28-208ENST00000469744 C16orf92Q96LL3 132 aa12.98□□□□□ -0.33
MRPL28-208ENST00000469744 SAMD10Q9BYL1 202 aa12.98□□□□□ -0.33
MRPL28-208ENST00000469744 CSMD3Q7Z407 3707 aa12.98□□□□□ -0.33
MRPL28-208ENST00000469744 LOC102724200A0A096LPH7 203 aaPredicted RBP12.97□□□□□ -0.33
MRPL28-208ENST00000469744 CTRLP40313 264 aa12.97□□□□□ -0.33
MRPL28-208ENST00000469744 TFPI2P48307 235 aa12.97□□□□□ -0.33
MRPL28-208ENST00000469744 TMEM78Q5T7P6 136 aa12.97□□□□□ -0.33
MRPL28-208ENST00000469744 CDPF1Q6NVV7 123 aa12.97□□□□□ -0.33
MRPL28-208ENST00000469744 RNF182Q8N6D2 247 aa12.97□□□□□ -0.33
MRPL28-208ENST00000469744 Q8TAT8 98 aa12.97□□□□□ -0.33
MRPL28-208ENST00000469744 SSBP4Q9BWG4 385 aaPredicted RBP12.97□□□□□ -0.33
MRPL28-208ENST00000469744 AGPAT4-IT1Q9H0P7 198 aa12.97□□□□□ -0.33
MRPL28-208ENST00000469744 SOCS3O14543 225 aa12.97□□□□□ -0.33
MRPL28-208ENST00000469744 ZNF324O75467 553 aaPredicted RBP12.97□□□□□ -0.33
MRPL28-208ENST00000469744 ARMS2P0C7Q2 107 aa12.97□□□□□ -0.33
MRPL28-208ENST00000469744 ZNF80P51504 273 aaPredicted RBP12.97□□□□□ -0.33
MRPL28-208ENST00000469744 PKIAP61925 76 aa12.97□□□□□ -0.33
MRPL28-208ENST00000469744 ERCC8Q13216 396 aa12.97□□□□□ -0.33
MRPL28-208ENST00000469744 LINC01559Q495D7 138 aa12.97□□□□□ -0.33
MRPL28-208ENST00000469744 OR4C46A6NHA9 309 aa12.96□□□□□ -0.34
MRPL28-208ENST00000469744 IGLC6P0CF74 106 aa12.96□□□□□ -0.34
MRPL28-208ENST00000469744 LINC00477Q96M19 166 aa12.96□□□□□ -0.34
MRPL28-208ENST00000469744 Q6ZWC4 215 aa12.95□□□□□ -0.34
MRPL28-208ENST00000469744 NRN1Q9NPD7 142 aa12.95□□□□□ -0.34
MRPL28-208ENST00000469744 NAGKQ9UJ70 344 aa12.95□□□□□ -0.34
MRPL28-208ENST00000469744 TRBV7-9A0A0J9YWB2 115 aa12.94□□□□□ -0.34
MRPL28-208ENST00000469744 AMTP48728 403 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms