RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 GNRH2O43555 120 aa12.63□□□□□ -0.39
PHGDH-204ENST00000469443 FHL2Q14192 279 aa12.63□□□□□ -0.39
PHGDH-204ENST00000469443 CYB561D1Q8N8Q1 229 aa12.63□□□□□ -0.39
PHGDH-204ENST00000469443 KCNS1Q96KK3 526 aa12.63□□□□□ -0.39
PHGDH-204ENST00000469443 CYTL1Q9NRR1 136 aa12.63□□□□□ -0.39
PHGDH-204ENST00000469443 ICOSQ9Y6W8 199 aa12.63□□□□□ -0.39
PHGDH-204ENST00000469443 IGHV3-16A0A0C4DH30 117 aa12.62□□□□□ -0.39
PHGDH-204ENST00000469443 FBLL1A6NHQ2 334 aaKnown RBP12.62□□□□□ -0.39
PHGDH-204ENST00000469443 SMLR1H3BR10 107 aa12.62□□□□□ -0.39
PHGDH-204ENST00000469443 IGLV2-11P01706 119 aa12.62□□□□□ -0.39
PHGDH-204ENST00000469443 TYMSP04818 313 aa12.62□□□□□ -0.39
PHGDH-204ENST00000469443 CRYBA4P53673 196 aa12.62□□□□□ -0.39
PHGDH-204ENST00000469443 FLI1Q01543 452 aaPredicted RBP12.62□□□□□ -0.39
PHGDH-204ENST00000469443 C6orf223Q8N319 242 aa12.62□□□□□ -0.39
PHGDH-204ENST00000469443 TMEM75Q8N9X5 138 aa12.62□□□□□ -0.39
PHGDH-204ENST00000469443 C8orf49Q96NF6 230 aa12.62□□□□□ -0.39
PHGDH-204ENST00000469443 SDF2L1Q9HCN8 221 aa12.62□□□□□ -0.39
PHGDH-204ENST00000469443 HHLA3Q9XRX5 114 aa12.62□□□□□ -0.39
PHGDH-204ENST00000469443 TRGV4A0A0C4DH28 118 aa12.61□□□□□ -0.39
PHGDH-204ENST00000469443 M0R2P5 195 aa12.61□□□□□ -0.39
PHGDH-204ENST00000469443 TTC32Q5I0X7 151 aa12.61□□□□□ -0.39
PHGDH-204ENST00000469443 ZNF479Q96JC4 524 aa12.61□□□□□ -0.39
PHGDH-204ENST00000469443 DNAH11Q96DT5 4516 aa12.61□□□□□ -0.39
PHGDH-204ENST00000469443 DYNC1H1Q14204 4646 aaKnown RBP12.6□□□□□ -0.39
PHGDH-204ENST00000469443 GCGP01275 180 aa12.6□□□□□ -0.39
PHGDH-204ENST00000469443 SFTA3P0C7M3 94 aa12.6□□□□□ -0.39
PHGDH-204ENST00000469443 ZNF80P51504 273 aaPredicted RBP12.6□□□□□ -0.39
PHGDH-204ENST00000469443 ZFP69Q49AA0 526 aa12.6□□□□□ -0.39
PHGDH-204ENST00000469443 SMUG1Q53HV7 270 aa12.6□□□□□ -0.39
PHGDH-204ENST00000469443 PRNTQ86SH4 94 aa12.6□□□□□ -0.39
PHGDH-204ENST00000469443 TRAV4A0A0B4J268 109 aa12.59□□□□□ -0.39
PHGDH-204ENST00000469443 FGF8P55075 233 aaPredicted RBP12.59□□□□□ -0.39
PHGDH-204ENST00000469443 UBE2G2P60604 165 aa12.59□□□□□ -0.39
PHGDH-204ENST00000469443 ZNF345Q14585 488 aa12.59□□□□□ -0.39
PHGDH-204ENST00000469443 KCNRGQ8N5I3 272 aa12.59□□□□□ -0.39
PHGDH-204ENST00000469443 NKX6-2Q9C056 277 aaPredicted RBP12.59□□□□□ -0.39
PHGDH-204ENST00000469443 IFNA7P01567 189 aa12.58□□□□□ -0.4
PHGDH-204ENST00000469443 PFN1P07737 140 aaKnown RBP12.58□□□□□ -0.4
PHGDH-204ENST00000469443 MRPL23Q16540 153 aaKnown RBP12.58□□□□□ -0.4
PHGDH-204ENST00000469443 SAPCD1Q5SSQ6 148 aa12.58□□□□□ -0.4
PHGDH-204ENST00000469443 KRTAP1-5Q9BYS1 174 aa12.58□□□□□ -0.4
PHGDH-204ENST00000469443 C11orf21Q9P2W6 132 aa12.58□□□□□ -0.4
PHGDH-204ENST00000469443 A0A1W2PPQ1 181 aa12.57□□□□□ -0.4
PHGDH-204ENST00000469443 MAP1LC3B2A6NCE7 125 aa12.57□□□□□ -0.4
PHGDH-204ENST00000469443 FAM74A7A6NL05 159 aa12.57□□□□□ -0.4
PHGDH-204ENST00000469443 PPT1P50897 306 aa12.57□□□□□ -0.4
PHGDH-204ENST00000469443 TNP2Q05952 138 aa12.57□□□□□ -0.4
PHGDH-204ENST00000469443 OR4C5Q8NGB2 326 aa12.57□□□□□ -0.4
PHGDH-204ENST00000469443 MAP1LC3BQ9GZQ8 125 aa12.57□□□□□ -0.4
PHGDH-204ENST00000469443 HERC2O95714 4834 aa12.57□□□□□ -0.4
PHGDH-204ENST00000469443 TRAV34A0A0B4J273 112 aa12.56□□□□□ -0.4
PHGDH-204ENST00000469443 HMSDA8MTL9 139 aa12.56□□□□□ -0.4
PHGDH-204ENST00000469443 PEX7O00628 323 aa12.56□□□□□ -0.4
PHGDH-204ENST00000469443 OR11H4Q8NGC9 324 aa12.56□□□□□ -0.4
PHGDH-204ENST00000469443 LINC00479Q96M42 142 aa12.56□□□□□ -0.4
PHGDH-204ENST00000469443 NEGR1Q7Z3B1 354 aa12.55□□□□□ -0.4
PHGDH-204ENST00000469443 HIST1H2BAQ96A08 127 aa12.55□□□□□ -0.4
PHGDH-204ENST00000469443 ARL2-SNX15V9GYD0 113 aa12.55□□□□□ -0.4
PHGDH-204ENST00000469443 KIAA1109Q2LD37 5005 aa12.55□□□□□ -0.4
PHGDH-204ENST00000469443 A0A0D9SG52 128 aa12.54□□□□□ -0.4
PHGDH-204ENST00000469443 K7EQD1 137 aa12.54□□□□□ -0.4
PHGDH-204ENST00000469443 SIVA1O15304 175 aa12.54□□□□□ -0.4
PHGDH-204ENST00000469443 NXPH4O95158 308 aa12.54□□□□□ -0.4
PHGDH-204ENST00000469443 ORM1P02763 201 aa12.54□□□□□ -0.4
PHGDH-204ENST00000469443 GYPEP15421 78 aa12.54□□□□□ -0.4
PHGDH-204ENST00000469443 SRIP30626 198 aa12.54□□□□□ -0.4
PHGDH-204ENST00000469443 LYPD5Q6UWN5 251 aa12.54□□□□□ -0.4
PHGDH-204ENST00000469443 STOML3Q8TAV4 291 aa12.54□□□□□ -0.4
PHGDH-204ENST00000469443 PCNPQ8WW12 178 aaKnown RBP12.54□□□□□ -0.4
PHGDH-204ENST00000469443 C9orf85Q96MD7 179 aa12.54□□□□□ -0.4
PHGDH-204ENST00000469443 C9JCJ5 164 aa12.53□□□□□ -0.4
PHGDH-204ENST00000469443 SEC11BP0C7V7 166 aa12.53□□□□□ -0.4
PHGDH-204ENST00000469443 BTF3P20290 206 aaKnown RBP12.53□□□□□ -0.4
PHGDH-204ENST00000469443 ZNF876PQ49A33 203 aa12.53□□□□□ -0.4
PHGDH-204ENST00000469443 Q86TA4 180 aa12.53□□□□□ -0.4
PHGDH-204ENST00000469443 KANTRA0A1W2PQU2 76 aa12.52□□□□□ -0.41
PHGDH-204ENST00000469443 FABP5P3A8MUU1 101 aa12.52□□□□□ -0.41
PHGDH-204ENST00000469443 BCL2L11O43521 198 aa12.52□□□□□ -0.41
PHGDH-204ENST00000469443 FHITP49789 147 aa12.52□□□□□ -0.41
PHGDH-204ENST00000469443 ZNF471Q9BX82 626 aaPredicted RBP12.52□□□□□ -0.41
PHGDH-204ENST00000469443 UMAD1C9J7I0 102 aa12.51□□□□□ -0.41
PHGDH-204ENST00000469443 MED14OSP0DP75 135 aa12.51□□□□□ -0.41
PHGDH-204ENST00000469443 GATA1P15976 413 aaPredicted RBP12.51□□□□□ -0.41
PHGDH-204ENST00000469443 PTH2Q96A98 100 aa12.51□□□□□ -0.41
PHGDH-204ENST00000469443 TXNDC17Q9BRA2 123 aa12.51□□□□□ -0.41
PHGDH-204ENST00000469443 TCEAL7Q9BRU2 100 aa12.51□□□□□ -0.41
PHGDH-204ENST00000469443 IGKV3D-20A0A0C4DH25 116 aa12.5□□□□□ -0.41
PHGDH-204ENST00000469443 RS1O15537 224 aa12.5□□□□□ -0.41
PHGDH-204ENST00000469443 CIDEAO60543 219 aa12.5□□□□□ -0.41
PHGDH-204ENST00000469443 RNASE3P12724 160 aaKnown RBP12.5□□□□□ -0.41
PHGDH-204ENST00000469443 CFAP126Q5VTH2 177 aa12.5□□□□□ -0.41
PHGDH-204ENST00000469443 CST9LP1Q5W188 147 aa12.5□□□□□ -0.41
PHGDH-204ENST00000469443 DPPA3Q6W0C5 159 aa12.5□□□□□ -0.41
PHGDH-204ENST00000469443 ZNF575Q86XF7 245 aa12.5□□□□□ -0.41
PHGDH-204ENST00000469443 FMC1Q96HJ9 113 aa12.5□□□□□ -0.41
PHGDH-204ENST00000469443 ZFP30Q9Y2G7 519 aa12.5□□□□□ -0.41
PHGDH-204ENST00000469443 PGPEP1LA6NFU8 196 aa12.49□□□□□ -0.41
PHGDH-204ENST00000469443 UBE2G1P62253 170 aa12.49□□□□□ -0.41
PHGDH-204ENST00000469443 EIF5AP63241 154 aaKnown RBP12.49□□□□□ -0.41
PHGDH-204ENST00000469443 ZNF506Q5JVG8 444 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms